RNA–Protein interactions for RNA: ENST00000554672.5

ATXN3-229, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 759 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-229ENST00000554672 HIF1AQ16665 826 aa6.47□□□□□ -1.37
ATXN3-229ENST00000554672 CIAPIN1Q6FI81 312 aa6.47□□□□□ -1.37
ATXN3-229ENST00000554672 VPS33BQ9H267 617 aa6.47□□□□□ -1.37
ATXN3-229ENST00000554672 IGFLR1Q9H665 355 aa6.47□□□□□ -1.37
ATXN3-229ENST00000554672 PGAP2Q9UHJ9 254 aa6.47□□□□□ -1.37
ATXN3-229ENST00000554672 NAGPAQ9UK23 515 aa6.47□□□□□ -1.37
ATXN3-229ENST00000554672 TIMELESSQ9UNS1 1208 aa6.47□□□□□ -1.37
ATXN3-229ENST00000554672 USP16Q9Y5T5 823 aa6.47□□□□□ -1.37
ATXN3-229ENST00000554672 FAM177BA6PVY3 158 aa6.46□□□□□ -1.38
ATXN3-229ENST00000554672 BTBD11A6QL63 1104 aa6.46□□□□□ -1.38
ATXN3-229ENST00000554672 SNRPA1P09661 255 aaKnown RBP6.46□□□□□ -1.38
ATXN3-229ENST00000554672 HOXA10P31260 410 aaPredicted RBP6.46□□□□□ -1.38
ATXN3-229ENST00000554672 TJP1Q07157 1748 aa6.46□□□□□ -1.38
ATXN3-229ENST00000554672 CCINQ13939 588 aa6.46□□□□□ -1.38
ATXN3-229ENST00000554672 CRY2Q49AN0 593 aa6.46□□□□□ -1.38
ATXN3-229ENST00000554672 PRRT3Q5FWE3 981 aa6.46□□□□□ -1.38
ATXN3-229ENST00000554672 CDC37L1Q7L3B6 337 aa6.46□□□□□ -1.38
ATXN3-229ENST00000554672 NIM1KQ8IY84 436 aa6.46□□□□□ -1.38
ATXN3-229ENST00000554672 UBE2OQ9C0C9 1292 aaKnown RBP6.46□□□□□ -1.38
ATXN3-229ENST00000554672 TMX4Q9H1E5 349 aaPredicted RBP6.46□□□□□ -1.38
ATXN3-229ENST00000554672 DNAJB12Q9NXW2 375 aaKnown RBP6.46□□□□□ -1.38
ATXN3-229ENST00000554672 GPRC5DQ9NZD1 345 aa6.46□□□□□ -1.38
ATXN3-229ENST00000554672 ZFATQ9P243 1243 aa6.46□□□□□ -1.38
ATXN3-229ENST00000554672 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.46□□□□□ -1.38
ATXN3-229ENST00000554672 ANKRD26Q9UPS8 1709 aa6.45□□□□□ -1.38
ATXN3-229ENST00000554672 SPDYE3A6NKU9 549 aa6.45□□□□□ -1.38
ATXN3-229ENST00000554672 KCNQ3O43525 872 aa6.45□□□□□ -1.38
ATXN3-229ENST00000554672 LILRB5O75023 590 aa6.45□□□□□ -1.38
ATXN3-229ENST00000554672 NFKB1P19838 968 aa6.45□□□□□ -1.38
ATXN3-229ENST00000554672 IDH3AP50213 366 aa6.45□□□□□ -1.38
ATXN3-229ENST00000554672 SOX10P56693 466 aa6.45□□□□□ -1.38
ATXN3-229ENST00000554672 TBC1D8BQ0IIM8 1120 aa6.45□□□□□ -1.38
ATXN3-229ENST00000554672 TRIM28Q13263 835 aaKnown RBP6.45□□□□□ -1.38
ATXN3-229ENST00000554672 NUDT8Q8WV74 236 aa6.45□□□□□ -1.38
ATXN3-229ENST00000554672 RPGRQ92834 1020 aaKnown RBP6.45□□□□□ -1.38
ATXN3-229ENST00000554672 RBM17Q96I25 401 aaKnown RBP6.45□□□□□ -1.38
ATXN3-229ENST00000554672 CRAMP1Q96RY5 1269 aa6.45□□□□□ -1.38
ATXN3-229ENST00000554672 GLIS2Q9BZE0 524 aaPredicted RBP6.45□□□□□ -1.38
ATXN3-229ENST00000554672 NYXQ9GZU5 481 aa6.45□□□□□ -1.38
ATXN3-229ENST00000554672 EFCC1Q9HA90 598 aa6.45□□□□□ -1.38
ATXN3-229ENST00000554672 SAGE1Q9NXZ1 904 aa6.45□□□□□ -1.38
ATXN3-229ENST00000554672 LRFN2Q9ULH4 789 aa6.45□□□□□ -1.38
ATXN3-229ENST00000554672 ZNRF3Q9ULT6 936 aa6.45□□□□□ -1.38
ATXN3-229ENST00000554672 MRC1P22897 1456 aa6.45□□□□□ -1.38
ATXN3-229ENST00000554672 SCN4AP35499 1836 aa6.45□□□□□ -1.38
ATXN3-229ENST00000554672 KIF20BQ96Q89 1820 aa6.45□□□□□ -1.38
ATXN3-229ENST00000554672 TIAM2Q8IVF5 1701 aa6.45□□□□□ -1.38
ATXN3-229ENST00000554672 ZBTB42B2RXF5 422 aa6.44□□□□□ -1.38
ATXN3-229ENST00000554672 OPLAHO14841 1288 aa6.44□□□□□ -1.38
ATXN3-229ENST00000554672 PPIP5K2O43314 1243 aa6.44□□□□□ -1.38
ATXN3-229ENST00000554672 PIP4K2AP48426 406 aaPredicted RBP6.44□□□□□ -1.38
ATXN3-229ENST00000554672 AFF1P51825 1210 aaKnown RBP6.44□□□□□ -1.38
ATXN3-229ENST00000554672 HUNKP57058 714 aa6.44□□□□□ -1.38
ATXN3-229ENST00000554672 CXCL9Q07325 125 aa6.44□□□□□ -1.38
ATXN3-229ENST00000554672 HLFQ16534 295 aa6.44□□□□□ -1.38
ATXN3-229ENST00000554672 RSPO4Q2I0M5 234 aaPredicted RBP6.44□□□□□ -1.38
ATXN3-229ENST00000554672 NKAPLQ5M9Q1 402 aa6.44□□□□□ -1.38
ATXN3-229ENST00000554672 PSAPL1Q6NUJ1 521 aa6.44□□□□□ -1.38
ATXN3-229ENST00000554672 SUPT20HQ8NEM7 779 aa6.44□□□□□ -1.38
ATXN3-229ENST00000554672 MYO19Q96H55 970 aa6.44□□□□□ -1.38
ATXN3-229ENST00000554672 SEMA6BQ9H3T3 888 aa6.44□□□□□ -1.38
ATXN3-229ENST00000554672 ZNF408Q9H9D4 720 aa6.44□□□□□ -1.38
ATXN3-229ENST00000554672 TPSG1Q9NRR2 321 aa6.44□□□□□ -1.38
ATXN3-229ENST00000554672 KIF7Q2M1P5 1343 aa6.44□□□□□ -1.38
ATXN3-229ENST00000554672 AFDNP55196 1824 aaKnown RBP6.43□□□□□ -1.38
ATXN3-229ENST00000554672 FER1L6Q2WGJ9 1857 aa6.43□□□□□ -1.38
ATXN3-229ENST00000554672 A0A0A0MRY4 1105 aa6.43□□□□□ -1.38
ATXN3-229ENST00000554672 PRAMEF22A3QJZ6 481 aa6.43□□□□□ -1.38
ATXN3-229ENST00000554672 ERVV-1B6SEH8 477 aa6.43□□□□□ -1.38
ATXN3-229ENST00000554672 H7C1D1 291 aa6.43□□□□□ -1.38
ATXN3-229ENST00000554672 TCERG1O14776 1098 aaKnown RBP6.43□□□□□ -1.38
ATXN3-229ENST00000554672 MICAL2O94851 1124 aa6.43□□□□□ -1.38
ATXN3-229ENST00000554672 MAP3K6O95382 1288 aa6.43□□□□□ -1.38
ATXN3-229ENST00000554672 SELPP16109 830 aa6.43□□□□□ -1.38
ATXN3-229ENST00000554672 TARSP26639 723 aaKnown RBP6.43□□□□□ -1.38
ATXN3-229ENST00000554672 GMPSP49915 693 aaPredicted RBP6.43□□□□□ -1.38
ATXN3-229ENST00000554672 KIF23Q02241 960 aaPredicted RBP6.43□□□□□ -1.38
ATXN3-229ENST00000554672 TNIP1Q15025 636 aa6.43□□□□□ -1.38
ATXN3-229ENST00000554672 RGMBQ6NW40 437 aa6.43□□□□□ -1.38
ATXN3-229ENST00000554672 USP48Q86UV5 1035 aa6.43□□□□□ -1.38
ATXN3-229ENST00000554672 C2orf69Q8N8R5 385 aa6.43□□□□□ -1.38
ATXN3-229ENST00000554672 FAM200AQ8TCP9 573 aa6.43□□□□□ -1.38
ATXN3-229ENST00000554672 GCC1Q96CN9 775 aa6.43□□□□□ -1.38
ATXN3-229ENST00000554672 IFT43Q96FT9 208 aa6.43□□□□□ -1.38
ATXN3-229ENST00000554672 BCL2L13Q9BXK5 485 aa6.43□□□□□ -1.38
ATXN3-229ENST00000554672 JPH1Q9HDC5 661 aaPredicted RBP6.43□□□□□ -1.38
ATXN3-229ENST00000554672 RNF186Q9NXI6 227 aa6.43□□□□□ -1.38
ATXN3-229ENST00000554672 ATP6V0A2Q9Y487 856 aa6.43□□□□□ -1.38
ATXN3-229ENST00000554672 DLEC1Q9Y238 1755 aa6.43□□□□□ -1.38
ATXN3-229ENST00000554672 VIRMAQ69YN4 1812 aaKnown RBP6.43□□□□□ -1.38
ATXN3-229ENST00000554672 SLX4Q8IY92 1834 aa6.43□□□□□ -1.38
ATXN3-229ENST00000554672 NPC1L1Q9UHC9 1359 aa6.43□□□□□ -1.38
ATXN3-229ENST00000554672 ADAMTSL1Q8N6G6 1762 aa6.42□□□□□ -1.38
ATXN3-229ENST00000554672 FAM155AB1AL88 458 aaPredicted RBP6.42□□□□□ -1.38
ATXN3-229ENST00000554672 U2SURPO15042 1029 aaKnown RBP6.42□□□□□ -1.38
ATXN3-229ENST00000554672 TRPA1O75762 1119 aa6.42□□□□□ -1.38
ATXN3-229ENST00000554672 BBOX1O75936 387 aa6.42□□□□□ -1.38
ATXN3-229ENST00000554672 RFX1P22670 979 aa6.42□□□□□ -1.38
ATXN3-229ENST00000554672 PLAURQ03405 335 aa6.42□□□□□ -1.38
ATXN3-229ENST00000554672 GRIK5Q16478 980 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms