RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 C9orf84Q5VXU9 1444 aa6.24□□□□□ -1.41
ATXN3-227ENST00000554491 RBAK-RBAKDNI3L0D1 243 aa6.23□□□□□ -1.41
ATXN3-227ENST00000554491 TRIM37O94972 964 aa6.23□□□□□ -1.41
ATXN3-227ENST00000554491 EOMESO95936 686 aa6.23□□□□□ -1.41
ATXN3-227ENST00000554491 GSTT1P30711 240 aa6.23□□□□□ -1.41
ATXN3-227ENST00000554491 ZP2Q05996 745 aa6.23□□□□□ -1.41
ATXN3-227ENST00000554491 ASB11Q8WXH4 323 aa6.23□□□□□ -1.41
ATXN3-227ENST00000554491 PCDHA4Q9UN74 947 aa6.23□□□□□ -1.41
ATXN3-227ENST00000554491 CDK11AQ9UQ88 783 aaPredicted RBP6.23□□□□□ -1.41
ATXN3-227ENST00000554491 GNEQ9Y223 722 aaKnown RBP6.23□□□□□ -1.41
ATXN3-227ENST00000554491 ATP10BO94823 1461 aa6.22□□□□□ -1.41
ATXN3-227ENST00000554491 MYO3AQ8NEV4 1616 aa6.22□□□□□ -1.41
ATXN3-227ENST00000554491 RAPGEF6Q8TEU7 1601 aa6.22□□□□□ -1.41
ATXN3-227ENST00000554491 DBX1A6NMT0 343 aa6.22□□□□□ -1.41
ATXN3-227ENST00000554491 FANCGO15287 622 aa6.22□□□□□ -1.41
ATXN3-227ENST00000554491 HSPA1LP34931 641 aa6.22□□□□□ -1.41
ATXN3-227ENST00000554491 MESP2Q0VG99 397 aa6.22□□□□□ -1.41
ATXN3-227ENST00000554491 MLECQ14165 292 aa6.22□□□□□ -1.41
ATXN3-227ENST00000554491 FYB2Q5VWT5 728 aa6.22□□□□□ -1.41
ATXN3-227ENST00000554491 LLGL2Q6P1M3 1020 aa6.22□□□□□ -1.41
ATXN3-227ENST00000554491 ARMCX6Q7L4S7 300 aa6.22□□□□□ -1.41
ATXN3-227ENST00000554491 KSR1Q8IVT5 923 aa6.22□□□□□ -1.41
ATXN3-227ENST00000554491 CEP44Q9C0F1 390 aa6.22□□□□□ -1.41
ATXN3-227ENST00000554491 WWC3Q9ULE0 1092 aa6.22□□□□□ -1.41
ATXN3-227ENST00000554491 PITPNM2Q9BZ72 1349 aa6.22□□□□□ -1.41
ATXN3-227ENST00000554491 CNTNAP4Q9C0A0 1308 aa6.22□□□□□ -1.41
ATXN3-227ENST00000554491 RAPGEF2Q9Y4G8 1499 aa6.22□□□□□ -1.41
ATXN3-227ENST00000554491 ZNF503-AS2A6NEH8 195 aa6.21□□□□□ -1.42
ATXN3-227ENST00000554491 LRRC10BA6NIK2 292 aa6.21□□□□□ -1.42
ATXN3-227ENST00000554491 CELA3AP09093 270 aa6.21□□□□□ -1.42
ATXN3-227ENST00000554491 MAPK8P45983 427 aa6.21□□□□□ -1.42
ATXN3-227ENST00000554491 PTPN11Q06124 597 aaPredicted RBP6.21□□□□□ -1.42
ATXN3-227ENST00000554491 INPP5AQ14642 412 aa6.21□□□□□ -1.42
ATXN3-227ENST00000554491 CDC37L1Q7L3B6 337 aa6.21□□□□□ -1.42
ATXN3-227ENST00000554491 ZSWIM9Q86XI8 627 aa6.21□□□□□ -1.42
ATXN3-227ENST00000554491 FBRSQ9HAH7 460 aa6.21□□□□□ -1.42
ATXN3-227ENST00000554491 PPM1HQ9ULR3 514 aa6.21□□□□□ -1.42
ATXN3-227ENST00000554491 CTNND2Q9UQB3 1225 aa6.21□□□□□ -1.42
ATXN3-227ENST00000554491 REREQ9P2R6 1566 aa6.21□□□□□ -1.42
ATXN3-227ENST00000554491 POLR1AO95602 1720 aaPredicted RBP6.21□□□□□ -1.42
ATXN3-227ENST00000554491 ZNF335Q9H4Z2 1342 aaPredicted RBP6.21□□□□□ -1.42
ATXN3-227ENST00000554491 ALKQ9UM73 1620 aa6.21□□□□□ -1.42
ATXN3-227ENST00000554491 MROH2AA6NES4 1674 aa6.2□□□□□ -1.42
ATXN3-227ENST00000554491 GNAT3A8MTJ3 354 aa6.2□□□□□ -1.42
ATXN3-227ENST00000554491 PRR33A8MZF0 331 aa6.2□□□□□ -1.42
ATXN3-227ENST00000554491 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.2□□□□□ -1.42
ATXN3-227ENST00000554491 SLITRK5O94991 958 aa6.2□□□□□ -1.42
ATXN3-227ENST00000554491 CEBPAP49715 358 aaPredicted RBP6.2□□□□□ -1.42
ATXN3-227ENST00000554491 PKN1Q16512 942 aa6.2□□□□□ -1.42
ATXN3-227ENST00000554491 LRFN4Q6PJG9 635 aa6.2□□□□□ -1.42
ATXN3-227ENST00000554491 SPOCD1Q6ZMY3 1216 aa6.2□□□□□ -1.42
ATXN3-227ENST00000554491 LIN37Q96GY3 246 aaPredicted RBP6.2□□□□□ -1.42
ATXN3-227ENST00000554491 PRDM5Q9NQX1 630 aaPredicted RBP6.2□□□□□ -1.42
ATXN3-227ENST00000554491 SAMM50Q9Y512 469 aa6.2□□□□□ -1.42
ATXN3-227ENST00000554491 ATP10AO60312 1499 aa6.2□□□□□ -1.42
ATXN3-227ENST00000554491 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.2□□□□□ -1.42
ATXN3-227ENST00000554491 DIP2CQ9Y2E4 1556 aa6.19□□□□□ -1.42
ATXN3-227ENST00000554491 PRAMEF27A3QJZ7 478 aa6.19□□□□□ -1.42
ATXN3-227ENST00000554491 CLCN7P51798 805 aa6.19□□□□□ -1.42
ATXN3-227ENST00000554491 FMR1Q06787 632 aaKnown RBP eCLIP6.19□□□□□ -1.42
ATXN3-227ENST00000554491 KCNMB1Q16558 191 aa6.19□□□□□ -1.42
ATXN3-227ENST00000554491 MLANAQ16655 118 aa6.19□□□□□ -1.42
ATXN3-227ENST00000554491 ZNF326Q5BKZ1 582 aaKnown RBP6.19□□□□□ -1.42
ATXN3-227ENST00000554491 PCNX4Q63HM2 1172 aa6.19□□□□□ -1.42
ATXN3-227ENST00000554491 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.19□□□□□ -1.42
ATXN3-227ENST00000554491 FBF1Q8TES7 1133 aa6.19□□□□□ -1.42
ATXN3-227ENST00000554491 ELMO3Q96BJ8 720 aa6.19□□□□□ -1.42
ATXN3-227ENST00000554491 SRCIN1Q9C0H9 1055 aa6.19□□□□□ -1.42
ATXN3-227ENST00000554491 ATP13A1Q9HD20 1204 aa6.19□□□□□ -1.42
ATXN3-227ENST00000554491 PLA2R1Q13018 1463 aa6.19□□□□□ -1.42
ATXN3-227ENST00000554491 CPS1P31327 1500 aa6.19□□□□□ -1.42
ATXN3-227ENST00000554491 ABCA6Q8N139 1617 aa6.18□□□□□ -1.42
ATXN3-227ENST00000554491 TCOF1Q13428 1488 aaKnown RBP6.18□□□□□ -1.42
ATXN3-227ENST00000554491 CDK8P49336 464 aa6.18□□□□□ -1.42
ATXN3-227ENST00000554491 SLBPQ14493 270 aaKnown RBP eCLIP6.18□□□□□ -1.42
ATXN3-227ENST00000554491 LRRC14Q15048 493 aa6.18□□□□□ -1.42
ATXN3-227ENST00000554491 NKG7Q16617 165 aa6.18□□□□□ -1.42
ATXN3-227ENST00000554491 ZNF507Q8TCN5 953 aa6.18□□□□□ -1.42
ATXN3-227ENST00000554491 PLPPR2Q96GM1 343 aa6.18□□□□□ -1.42
ATXN3-227ENST00000554491 HSPA12BQ96MM6 686 aa6.18□□□□□ -1.42
ATXN3-227ENST00000554491 SLC38A3Q99624 504 aa6.18□□□□□ -1.42
ATXN3-227ENST00000554491 CHMP4AQ9BY43 222 aa6.18□□□□□ -1.42
ATXN3-227ENST00000554491 FOXQ1Q9C009 403 aa6.18□□□□□ -1.42
ATXN3-227ENST00000554491 CARS2Q9HA77 564 aaKnown RBP6.18□□□□□ -1.42
ATXN3-227ENST00000554491 MAPK8IP1Q9UQF2 711 aa6.18□□□□□ -1.42
ATXN3-227ENST00000554491 KDM5CP41229 1560 aa6.18□□□□□ -1.42
ATXN3-227ENST00000554491 CEP170BQ9Y4F5 1589 aaPredicted RBP6.18□□□□□ -1.42
ATXN3-227ENST00000554491 RNF17Q9BXT8 1623 aaKnown RBP6.17□□□□□ -1.42
ATXN3-227ENST00000554491 MYO5CQ9NQX4 1742 aa6.17□□□□□ -1.42
ATXN3-227ENST00000554491 AGLP35573 1532 aa6.17□□□□□ -1.42
ATXN3-227ENST00000554491 LRIG2O94898 1065 aa6.17□□□□□ -1.42
ATXN3-227ENST00000554491 GLIPR1L2Q4G1C9 344 aa6.17□□□□□ -1.42
ATXN3-227ENST00000554491 CDKAL1Q5VV42 579 aa6.17□□□□□ -1.42
ATXN3-227ENST00000554491 CYFIP1Q7L576 1253 aa6.17□□□□□ -1.42
ATXN3-227ENST00000554491 CILP2Q8IUL8 1156 aa6.17□□□□□ -1.42
ATXN3-227ENST00000554491 KCT2Q8NC54 265 aa6.17□□□□□ -1.42
ATXN3-227ENST00000554491 RIN3Q8TB24 985 aa6.17□□□□□ -1.42
ATXN3-227ENST00000554491 FAM84AQ96KN4 292 aa6.17□□□□□ -1.42
ATXN3-227ENST00000554491 KRTAP4-9Q9BYQ8 210 aa6.17□□□□□ -1.42
ATXN3-227ENST00000554491 SEMA3GQ9NS98 782 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms