RNA–Protein interactions for RNA: ENST00000554409.1

LINC00640-201, long intergenic non-protein coding RNA 640, humanhuman

TSL 3 BASIC

Gene LINC00640, Length 498 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00640-201ENST00000554409 SDR42E1Q8WUS8 393 aa9.07□□□□□ -0.96
LINC00640-201ENST00000554409 PUS7LQ9H0K6 701 aaKnown RBP9.07□□□□□ -0.96
LINC00640-201ENST00000554409 EFCC1Q9HA90 598 aa9.07□□□□□ -0.96
LINC00640-201ENST00000554409 SCUBE2Q9NQ36 999 aa9.07□□□□□ -0.96
LINC00640-201ENST00000554409 MCM9Q9NXL9 1143 aa9.07□□□□□ -0.96
LINC00640-201ENST00000554409 ZBTB21Q9ULJ3 1066 aa9.07□□□□□ -0.96
LINC00640-201ENST00000554409 PTPN22Q9Y2R2 807 aa9.07□□□□□ -0.96
LINC00640-201ENST00000554409 C19orf81C9J6K1 198 aa9.06□□□□□ -0.96
LINC00640-201ENST00000554409 CHGBP05060 677 aa9.06□□□□□ -0.96
LINC00640-201ENST00000554409 CYP2C8P10632 490 aa9.06□□□□□ -0.96
LINC00640-201ENST00000554409 BCRP11274 1271 aa9.06□□□□□ -0.96
LINC00640-201ENST00000554409 RGS19P49795 217 aa9.06□□□□□ -0.96
LINC00640-201ENST00000554409 HMGCS2P54868 508 aa9.06□□□□□ -0.96
LINC00640-201ENST00000554409 KIF22Q14807 665 aa9.06□□□□□ -0.96
LINC00640-201ENST00000554409 LRRFIP1Q32MZ4 808 aaKnown RBP9.06□□□□□ -0.96
LINC00640-201ENST00000554409 ANKRD45Q5TZF3 282 aa9.06□□□□□ -0.96
LINC00640-201ENST00000554409 SMC5Q8IY18 1101 aa9.06□□□□□ -0.96
LINC00640-201ENST00000554409 EXOC6Q8TAG9 804 aa9.06□□□□□ -0.96
LINC00640-201ENST00000554409 OTUD7AQ8TE49 926 aaPredicted RBP9.06□□□□□ -0.96
LINC00640-201ENST00000554409 APPBP2Q92624 585 aa9.06□□□□□ -0.96
LINC00640-201ENST00000554409 RWDD1Q9H446 243 aaPredicted RBP9.06□□□□□ -0.96
LINC00640-201ENST00000554409 RTN4Q9NQC3 1192 aaKnown RBP9.06□□□□□ -0.96
LINC00640-201ENST00000554409 STAP2Q9UGK3 403 aa9.06□□□□□ -0.96
LINC00640-201ENST00000554409 SWAP70Q9UH65 585 aa9.06□□□□□ -0.96
LINC00640-201ENST00000554409 CPA4Q9UI42 421 aa9.06□□□□□ -0.96
LINC00640-201ENST00000554409 PNMA3Q9UL41 463 aa9.06□□□□□ -0.96
LINC00640-201ENST00000554409 GREB1LQ9C091 1923 aaPredicted RBP9.05□□□□□ -0.96
LINC00640-201ENST00000554409 USP17L10C9JJH3 530 aa9.05□□□□□ -0.96
LINC00640-201ENST00000554409 POTEB2H3BUK9 544 aa9.05□□□□□ -0.96
LINC00640-201ENST00000554409 RNF113AO15541 343 aaKnown RBP9.05□□□□□ -0.96
LINC00640-201ENST00000554409 PRKAB2O43741 272 aa9.05□□□□□ -0.96
LINC00640-201ENST00000554409 GH2P01242 217 aa9.05□□□□□ -0.96
LINC00640-201ENST00000554409 PRMT2P55345 433 aa9.05□□□□□ -0.96
LINC00640-201ENST00000554409 BACE1P56817 501 aa9.05□□□□□ -0.96
LINC00640-201ENST00000554409 PABPC4Q13310 644 aaKnown RBP eCLIP9.05□□□□□ -0.96
LINC00640-201ENST00000554409 MTMR2Q13614 643 aa9.05□□□□□ -0.96
LINC00640-201ENST00000554409 ABCB5Q2M3G0 1257 aa9.05□□□□□ -0.96
LINC00640-201ENST00000554409 SHROOM1Q2M3G4 852 aaPredicted RBP9.05□□□□□ -0.96
LINC00640-201ENST00000554409 CERKLQ49MI3 558 aaPredicted RBP9.05□□□□□ -0.96
LINC00640-201ENST00000554409 TREML2Q5T2D2 321 aa9.05□□□□□ -0.96
LINC00640-201ENST00000554409 C12orf60Q5U649 245 aa9.05□□□□□ -0.96
LINC00640-201ENST00000554409 GIMAP6Q6P9H5 292 aa9.05□□□□□ -0.96
LINC00640-201ENST00000554409 AMOTL1Q8IY63 956 aa9.05□□□□□ -0.96
LINC00640-201ENST00000554409 OSBP2Q969R2 916 aa9.05□□□□□ -0.96
LINC00640-201ENST00000554409 DDRGK1Q96HY6 314 aa9.05□□□□□ -0.96
LINC00640-201ENST00000554409 STRBPQ96SI9 672 aaKnown RBP9.05□□□□□ -0.96
LINC00640-201ENST00000554409 ARHGAP39Q9C0H5 1083 aa9.05□□□□□ -0.96
LINC00640-201ENST00000554409 SUPT16HQ9Y5B9 1047 aaKnown RBP9.05□□□□□ -0.96
LINC00640-201ENST00000554409 SLC4A4Q9Y6R1 1079 aa9.05□□□□□ -0.96
LINC00640-201ENST00000554409 ROBO3Q96MS0 1386 aa9.04□□□□□ -0.96
LINC00640-201ENST00000554409 GNAT2P19087 354 aa9.04□□□□□ -0.96
LINC00640-201ENST00000554409 CTGFP29279 349 aa9.04□□□□□ -0.96
LINC00640-201ENST00000554409 HOXA7P31268 230 aaPredicted RBP9.04□□□□□ -0.96
LINC00640-201ENST00000554409 PDE1AP54750 535 aa9.04□□□□□ -0.96
LINC00640-201ENST00000554409 CTR9Q6PD62 1173 aa9.04□□□□□ -0.96
LINC00640-201ENST00000554409 TICAM2Q86XR7 235 aa9.04□□□□□ -0.96
LINC00640-201ENST00000554409 HS6ST3Q8IZP7 471 aa9.04□□□□□ -0.96
LINC00640-201ENST00000554409 ARMC5Q96C12 935 aa9.04□□□□□ -0.96
LINC00640-201ENST00000554409 C12orf42Q96LP6 360 aa9.04□□□□□ -0.96
LINC00640-201ENST00000554409 CABP5Q9NP86 173 aa9.04□□□□□ -0.96
LINC00640-201ENST00000554409 TMOD4Q9NZQ9 345 aa9.04□□□□□ -0.96
LINC00640-201ENST00000554409 ARPP21Q9UBL0 812 aaPredicted RBP9.04□□□□□ -0.96
LINC00640-201ENST00000554409 GSG1L2A8MUP6 293 aa9.03□□□□□ -0.96
LINC00640-201ENST00000554409 USP17L12C9JPN9 530 aa9.03□□□□□ -0.96
LINC00640-201ENST00000554409 USP17L21D6R901 530 aa9.03□□□□□ -0.96
LINC00640-201ENST00000554409 GPAA1O43292 621 aa9.03□□□□□ -0.96
LINC00640-201ENST00000554409 IGHDP01880 384 aa9.03□□□□□ -0.96
LINC00640-201ENST00000554409 CYP2D6P10635 497 aa9.03□□□□□ -0.96
LINC00640-201ENST00000554409 OSBPP22059 807 aa9.03□□□□□ -0.96
LINC00640-201ENST00000554409 GUCY1A2P33402 732 aa9.03□□□□□ -0.96
LINC00640-201ENST00000554409 PSMC4P43686 418 aa9.03□□□□□ -0.96
LINC00640-201ENST00000554409 GCLCP48506 637 aaPredicted RBP9.03□□□□□ -0.96
LINC00640-201ENST00000554409 USP14P54578 494 aa9.03□□□□□ -0.96
LINC00640-201ENST00000554409 FAM110CQ1W6H9 321 aa9.03□□□□□ -0.96
LINC00640-201ENST00000554409 SBK1Q52WX2 424 aa9.03□□□□□ -0.96
LINC00640-201ENST00000554409 USP17L2Q6R6M4 530 aa9.03□□□□□ -0.96
LINC00640-201ENST00000554409 C16orf86Q6ZW13 317 aa9.03□□□□□ -0.96
LINC00640-201ENST00000554409 SMCR8Q8TEV9 937 aaPredicted RBP9.03□□□□□ -0.96
LINC00640-201ENST00000554409 EVI5LQ96CN4 794 aa9.03□□□□□ -0.96
LINC00640-201ENST00000554409 TRIM47Q96LD4 638 aa9.03□□□□□ -0.96
LINC00640-201ENST00000554409 FSD1Q9BTV5 496 aa9.03□□□□□ -0.96
LINC00640-201ENST00000554409 KIAA1683Q9H0B3 1180 aa9.03□□□□□ -0.96
LINC00640-201ENST00000554409 ASCC2Q9H1I8 757 aaPredicted RBP9.03□□□□□ -0.96
LINC00640-201ENST00000554409 EMILIN3Q9NT22 766 aa9.03□□□□□ -0.96
LINC00640-201ENST00000554409 SRRDQ9UH36 339 aa9.03□□□□□ -0.96
LINC00640-201ENST00000554409 PTCH2Q9Y6C5 1203 aa9.03□□□□□ -0.96
LINC00640-201ENST00000554409 PARP14Q460N5 1801 aa9.03□□□□□ -0.96
LINC00640-201ENST00000554409 A0A0G2JMZ2 1700 aa9.02□□□□□ -0.96
LINC00640-201ENST00000554409 M0R2C6 588 aa9.02□□□□□ -0.97
LINC00640-201ENST00000554409 HOXD10P28358 340 aa9.02□□□□□ -0.97
LINC00640-201ENST00000554409 CDK8P49336 464 aa9.02□□□□□ -0.97
LINC00640-201ENST00000554409 FCGRTP55899 365 aa9.02□□□□□ -0.97
LINC00640-201ENST00000554409 IRX3P78415 501 aaPredicted RBP9.02□□□□□ -0.97
LINC00640-201ENST00000554409 NUCB1Q02818 461 aa9.02□□□□□ -0.97
LINC00640-201ENST00000554409 SEPT2Q15019 361 aa9.02□□□□□ -0.97
LINC00640-201ENST00000554409 RAB3GAP1Q15042 981 aa9.02□□□□□ -0.97
LINC00640-201ENST00000554409 ZMYM1Q5SVZ6 1142 aa9.02□□□□□ -0.97
LINC00640-201ENST00000554409 TMEM179Q6ZVK1 233 aa9.02□□□□□ -0.97
LINC00640-201ENST00000554409 CHD1LQ86WJ1 897 aa9.02□□□□□ -0.97
LINC00640-201ENST00000554409 ANKRD13CQ8N6S4 541 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms