RNA–Protein interactions for RNA: ENST00000554302.1

RCCD1-202, Transcript of RCC1 domain containing 1, humanhuman

TSL 3

Gene RCCD1, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-202ENST00000554302 ERVK-24P63145 666 aa26.5■■□□□ 1.83
RCCD1-202ENST00000554302 ABCB5Q2M3G0 1257 aa26.5■■□□□ 1.83
RCCD1-202ENST00000554302 DNAJC2Q99543 621 aaKnown RBP26.5■■□□□ 1.83
RCCD1-202ENST00000554302 CRNKL1Q9BZJ0 848 aaKnown RBP26.5■■□□□ 1.83
RCCD1-202ENST00000554302 TFRCP02786 760 aaKnown RBP26.49■■□□□ 1.83
RCCD1-202ENST00000554302 GUCY1A2P33402 732 aa26.49■■□□□ 1.83
RCCD1-202ENST00000554302 FXR1P51114 621 aaKnown RBP eCLIP26.49■■□□□ 1.83
RCCD1-202ENST00000554302 USP14P54578 494 aa26.49■■□□□ 1.83
RCCD1-202ENST00000554302 USP6NLQ92738 828 aa26.49■■□□□ 1.83
RCCD1-202ENST00000554302 RPTORQ8N122 1335 aa26.48■■□□□ 1.83
RCCD1-202ENST00000554302 USP17L15C9J2P7 530 aa26.48■■□□□ 1.83
RCCD1-202ENST00000554302 USP17L13C9JLJ4 530 aa26.48■■□□□ 1.83
RCCD1-202ENST00000554302 USP17L11C9JVI0 530 aa26.48■■□□□ 1.83
RCCD1-202ENST00000554302 USP17L18D6R9N7 530 aa26.48■■□□□ 1.83
RCCD1-202ENST00000554302 USP17L22D6RA61 530 aa26.48■■□□□ 1.83
RCCD1-202ENST00000554302 USP17L17D6RBQ6 530 aa26.48■■□□□ 1.83
RCCD1-202ENST00000554302 USP17L19D6RCP7 530 aa26.48■■□□□ 1.83
RCCD1-202ENST00000554302 USP17L20D6RJB6 530 aa26.48■■□□□ 1.83
RCCD1-202ENST00000554302 XRCC5P13010 732 aaKnown RBP26.48■■□□□ 1.83
RCCD1-202ENST00000554302 ATP5JP18859 108 aa26.48■■□□□ 1.83
RCCD1-202ENST00000554302 MAPK4P31152 587 aa26.48■■□□□ 1.83
RCCD1-202ENST00000554302 USP17L24Q0WX57 530 aa26.48■■□□□ 1.83
RCCD1-202ENST00000554302 TRIM32Q13049 653 aa26.48■■□□□ 1.83
RCCD1-202ENST00000554302 RAB3GAP1Q15042 981 aa26.48■■□□□ 1.83
RCCD1-202ENST00000554302 MAP3K21Q5TCX8 1036 aa26.48■■□□□ 1.83
RCCD1-202ENST00000554302 ACER1Q8TDN7 264 aa26.48■■□□□ 1.83
RCCD1-202ENST00000554302 SOCS4Q8WXH5 440 aa26.48■■□□□ 1.83
RCCD1-202ENST00000554302 TRIB2Q92519 343 aa26.48■■□□□ 1.83
RCCD1-202ENST00000554302 EDC3Q96F86 508 aaKnown RBP26.48■■□□□ 1.83
RCCD1-202ENST00000554302 NUDT12Q9BQG2 462 aa26.48■■□□□ 1.83
RCCD1-202ENST00000554302 PORCNQ9H237 461 aa26.48■■□□□ 1.83
RCCD1-202ENST00000554302 DCP1AQ9NPI6 582 aaPredicted RBP26.48■■□□□ 1.83
RCCD1-202ENST00000554302 POLR3DP05423 398 aaPredicted RBP26.47■■□□□ 1.83
RCCD1-202ENST00000554302 EVX2Q03828 476 aa26.47■■□□□ 1.83
RCCD1-202ENST00000554302 PDE3AQ14432 1141 aa26.47■■□□□ 1.83
RCCD1-202ENST00000554302 CATSPERGQ6ZRH7 1159 aa26.47■■□□□ 1.83
RCCD1-202ENST00000554302 LCORLQ8N3X6 602 aa26.47■■□□□ 1.83
RCCD1-202ENST00000554302 FEZ1Q99689 392 aa26.47■■□□□ 1.83
RCCD1-202ENST00000554302 CABP5Q9NP86 173 aa26.47■■□□□ 1.83
RCCD1-202ENST00000554302 PAG1Q9NWQ8 432 aa26.47■■□□□ 1.83
RCCD1-202ENST00000554302 CNMDO75829 334 aa26.46■■□□□ 1.83
RCCD1-202ENST00000554302 VCAM1P19320 739 aa26.46■■□□□ 1.83
RCCD1-202ENST00000554302 LBX2Q6XYB7 198 aa26.46■■□□□ 1.83
RCCD1-202ENST00000554302 SDR42E1Q8WUS8 393 aa26.46■■□□□ 1.83
RCCD1-202ENST00000554302 HMX1Q9NP08 348 aaPredicted RBP26.46■■□□□ 1.83
RCCD1-202ENST00000554302 MCM9Q9NXL9 1143 aa26.46■■□□□ 1.83
RCCD1-202ENST00000554302 RABGAP1Q9Y3P9 1069 aa26.46■■□□□ 1.83
RCCD1-202ENST00000554302 CYP2B6P20813 491 aa26.45■■□□□ 1.82
RCCD1-202ENST00000554302 ADD2P35612 726 aa26.45■■□□□ 1.82
RCCD1-202ENST00000554302 ZYXQ15942 572 aaKnown RBP26.45■■□□□ 1.82
RCCD1-202ENST00000554302 MORN1Q5T089 497 aa26.45■■□□□ 1.82
RCCD1-202ENST00000554302 C20orf194Q5TEA3 1177 aa26.45■■□□□ 1.82
RCCD1-202ENST00000554302 GPR142Q7Z601 462 aa26.45■■□□□ 1.82
RCCD1-202ENST00000554302 ANKLE1Q8NAG6 615 aa26.45■■□□□ 1.82
RCCD1-202ENST00000554302 HAUS7Q99871 368 aa26.45■■□□□ 1.82
RCCD1-202ENST00000554302 PAGR1Q9BTK6 254 aa26.45■■□□□ 1.82
RCCD1-202ENST00000554302 PRO3102Q9H379 93 aa26.45■■□□□ 1.82
RCCD1-202ENST00000554302 BOLA2Q9H3K6 86 aa26.45■■□□□ 1.82
RCCD1-202ENST00000554302 CHRDL2Q6WN34 429 aa26.44■■□□□ 1.82
RCCD1-202ENST00000554302 PAWRQ96IZ0 340 aaKnown RBP26.44■■□□□ 1.82
RCCD1-202ENST00000554302 NR2E3Q9Y5X4 410 aa26.44■■□□□ 1.82
RCCD1-202ENST00000554302 SEPT2Q15019 361 aa26.43■■□□□ 1.82
RCCD1-202ENST00000554302 PLEKHH3Q7Z736 793 aa26.43■■□□□ 1.82
RCCD1-202ENST00000554302 TRMT44Q8IYL2 757 aaKnown RBP26.43■■□□□ 1.82
RCCD1-202ENST00000554302 ARMT1Q9H993 441 aa26.43■■□□□ 1.82
RCCD1-202ENST00000554302 MNX1P50219 401 aaPredicted RBP26.42■■□□□ 1.82
RCCD1-202ENST00000554302 SLFNL1Q499Z3 407 aa26.42■■□□□ 1.82
RCCD1-202ENST00000554302 SZT2Q5T011 3432 aa26.42■■□□□ 1.82
RCCD1-202ENST00000554302 A0A1W2PRG0 241 aa26.41■■□□□ 1.82
RCCD1-202ENST00000554302 CYP2D6P10635 497 aa26.41■■□□□ 1.82
RCCD1-202ENST00000554302 NECAB2Q7Z6G3 386 aa26.41■■□□□ 1.82
RCCD1-202ENST00000554302 DIS3LQ8TF46 1054 aaKnown RBP26.41■■□□□ 1.82
RCCD1-202ENST00000554302 ATP8A2Q9NTI2 1148 aa26.41■■□□□ 1.82
RCCD1-202ENST00000554302 SWAP70Q9UH65 585 aa26.41■■□□□ 1.82
RCCD1-202ENST00000554302 OGDHLQ9ULD0 1010 aa26.41■■□□□ 1.82
RCCD1-202ENST00000554302 PRKAB2O43741 272 aa26.4■■□□□ 1.82
RCCD1-202ENST00000554302 PRKAR2AP13861 404 aaKnown RBP26.4■■□□□ 1.82
RCCD1-202ENST00000554302 RGS2P41220 211 aa26.4■■□□□ 1.82
RCCD1-202ENST00000554302 UBE3CQ15386 1083 aa26.4■■□□□ 1.82
RCCD1-202ENST00000554302 CCAR1Q8IX12 1150 aaKnown RBP26.4■■□□□ 1.82
RCCD1-202ENST00000554302 LRRCC1Q9C099 1032 aa26.4■■□□□ 1.82
RCCD1-202ENST00000554302 DDX24Q9GZR7 859 aaKnown RBP eCLIP26.4■■□□□ 1.82
RCCD1-202ENST00000554302 RPAP3Q9H6T3 665 aaPredicted RBP26.4■■□□□ 1.82
RCCD1-202ENST00000554302 RBM27Q9P2N5 1060 aaKnown RBP26.4■■□□□ 1.82
RCCD1-202ENST00000554302 TRIOBPQ9H2D6 2365 aa26.4■■□□□ 1.82
RCCD1-202ENST00000554302 SPDYE16A6NNV3 312 aaPredicted RBP26.39■■□□□ 1.82
RCCD1-202ENST00000554302 MBD4O95243 580 aa26.39■■□□□ 1.82
RCCD1-202ENST00000554302 CHGBP05060 677 aa26.39■■□□□ 1.82
RCCD1-202ENST00000554302 CCNA1P78396 465 aa26.39■■□□□ 1.82
RCCD1-202ENST00000554302 SLC44A5Q8NCS7 719 aa26.39■■□□□ 1.82
RCCD1-202ENST00000554302 BCL11AQ9H165 835 aa26.39■■□□□ 1.82
RCCD1-202ENST00000554302 BTBD7Q9P203 1132 aa26.39■■□□□ 1.82
RCCD1-202ENST00000554302 ALPK3Q96L96 1907 aa26.39■■□□□ 1.81
RCCD1-202ENST00000554302 EVI5O60447 810 aa26.38■■□□□ 1.81
RCCD1-202ENST00000554302 ZKSCAN1P17029 563 aaPredicted RBP26.38■■□□□ 1.81
RCCD1-202ENST00000554302 CACNB2Q08289 660 aaPredicted RBP26.38■■□□□ 1.81
RCCD1-202ENST00000554302 CCL14Q16627 93 aa26.38■■□□□ 1.81
RCCD1-202ENST00000554302 TMEM179Q6ZVK1 233 aa26.38■■□□□ 1.81
RCCD1-202ENST00000554302 DYNLL2Q96FJ2 89 aa26.38■■□□□ 1.81
RCCD1-202ENST00000554302 APBA2Q99767 749 aa26.38■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms