RNA–Protein interactions for RNA: ENST00000554116.5

TUBB3-204, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 542 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-204ENST00000554116 PAGR1Q9BTK6 254 aa14.16□□□□□ -0.14
TUBB3-204ENST00000554116 ANTXR1Q9H6X2 564 aa14.16□□□□□ -0.14
TUBB3-204ENST00000554116 GINM1Q9NU53 330 aa14.16□□□□□ -0.14
TUBB3-204ENST00000554116 NOP58Q9Y2X3 529 aaKnown RBP14.16□□□□□ -0.14
TUBB3-204ENST00000554116 ZBED9Q6R2W3 1325 aa14.15□□□□□ -0.14
TUBB3-204ENST00000554116 ZKSCAN1P17029 563 aaPredicted RBP14.15□□□□□ -0.14
TUBB3-204ENST00000554116 GUCY1A2P33402 732 aa14.15□□□□□ -0.14
TUBB3-204ENST00000554116 TRPV1Q8NER1 839 aa14.15□□□□□ -0.14
TUBB3-204ENST00000554116 COL25A1Q9BXS0 654 aaPredicted RBP14.15□□□□□ -0.14
TUBB3-204ENST00000554116 UBE2OQ9C0C9 1292 aaKnown RBP14.15□□□□□ -0.14
TUBB3-204ENST00000554116 CCDC8Q9H0W5 538 aaPredicted RBP14.15□□□□□ -0.14
TUBB3-204ENST00000554116 C1orf115Q9H7X2 142 aa14.15□□□□□ -0.14
TUBB3-204ENST00000554116 BTBD7Q9P203 1132 aa14.15□□□□□ -0.14
TUBB3-204ENST00000554116 CYP7A1P22680 504 aa14.14□□□□□ -0.15
TUBB3-204ENST00000554116 MAP2K5Q13163 448 aa14.14□□□□□ -0.15
TUBB3-204ENST00000554116 CCDC158Q5M9N0 1113 aa14.14□□□□□ -0.15
TUBB3-204ENST00000554116 USP17L2Q6R6M4 530 aa14.14□□□□□ -0.15
TUBB3-204ENST00000554116 CATSPERGQ6ZRH7 1159 aa14.14□□□□□ -0.15
TUBB3-204ENST00000554116 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.14□□□□□ -0.15
TUBB3-204ENST00000554116 CRACR2BQ8N4Y2 399 aaPredicted RBP14.14□□□□□ -0.15
TUBB3-204ENST00000554116 MIGA1Q8NAN2 632 aa14.14□□□□□ -0.15
TUBB3-204ENST00000554116 NPLOC4Q8TAT6 608 aa14.14□□□□□ -0.15
TUBB3-204ENST00000554116 RABGAP1Q9Y3P9 1069 aa14.14□□□□□ -0.15
TUBB3-204ENST00000554116 LTBP2Q14767 1821 aa14.13□□□□□ -0.15
TUBB3-204ENST00000554116 SURF6O75683 361 aaKnown RBP14.13□□□□□ -0.15
TUBB3-204ENST00000554116 HOXC6P09630 235 aa14.13□□□□□ -0.15
TUBB3-204ENST00000554116 RLBP1P12271 317 aa14.13□□□□□ -0.15
TUBB3-204ENST00000554116 SHMT1P34896 483 aa14.13□□□□□ -0.15
TUBB3-204ENST00000554116 RGS2P41220 211 aa14.13□□□□□ -0.15
TUBB3-204ENST00000554116 PLCD1P51178 756 aa14.13□□□□□ -0.15
TUBB3-204ENST00000554116 ZYXQ15942 572 aaKnown RBP14.13□□□□□ -0.15
TUBB3-204ENST00000554116 LBX2Q6XYB7 198 aa14.13□□□□□ -0.15
TUBB3-204ENST00000554116 TRMT44Q8IYL2 757 aaKnown RBP14.13□□□□□ -0.15
TUBB3-204ENST00000554116 APBA2Q99767 749 aa14.13□□□□□ -0.15
TUBB3-204ENST00000554116 NOL10Q9BSC4 688 aaKnown RBP14.13□□□□□ -0.15
TUBB3-204ENST00000554116 KIAA1683Q9H0B3 1180 aa14.13□□□□□ -0.15
TUBB3-204ENST00000554116 TTC28Q96AY4 2481 aa14.13□□□□□ -0.15
TUBB3-204ENST00000554116 USP17L15C9J2P7 530 aa14.12□□□□□ -0.15
TUBB3-204ENST00000554116 USP17L13C9JLJ4 530 aa14.12□□□□□ -0.15
TUBB3-204ENST00000554116 USP17L11C9JVI0 530 aa14.12□□□□□ -0.15
TUBB3-204ENST00000554116 USP17L18D6R9N7 530 aa14.12□□□□□ -0.15
TUBB3-204ENST00000554116 USP17L22D6RA61 530 aa14.12□□□□□ -0.15
TUBB3-204ENST00000554116 USP17L17D6RBQ6 530 aa14.12□□□□□ -0.15
TUBB3-204ENST00000554116 USP17L19D6RCP7 530 aa14.12□□□□□ -0.15
TUBB3-204ENST00000554116 USP17L20D6RJB6 530 aa14.12□□□□□ -0.15
TUBB3-204ENST00000554116 POTEB2H3BUK9 544 aa14.12□□□□□ -0.15
TUBB3-204ENST00000554116 IGSF3O75054 1194 aa14.12□□□□□ -0.15
TUBB3-204ENST00000554116 VCAM1P19320 739 aa14.12□□□□□ -0.15
TUBB3-204ENST00000554116 PTPREP23469 700 aa14.12□□□□□ -0.15
TUBB3-204ENST00000554116 MDM2Q00987 491 aaPredicted RBP14.12□□□□□ -0.15
TUBB3-204ENST00000554116 GABPAQ06546 454 aa14.12□□□□□ -0.15
TUBB3-204ENST00000554116 USP17L24Q0WX57 530 aa14.12□□□□□ -0.15
TUBB3-204ENST00000554116 KIAA1755Q5JYT7 1200 aa14.12□□□□□ -0.15
TUBB3-204ENST00000554116 EDC3Q96F86 508 aaKnown RBP14.12□□□□□ -0.15
TUBB3-204ENST00000554116 RIOK1Q9BRS2 568 aaKnown RBP14.12□□□□□ -0.15
TUBB3-204ENST00000554116 EHD4Q9H223 541 aa14.12□□□□□ -0.15
TUBB3-204ENST00000554116 REV3LO60673 3130 aa14.11□□□□□ -0.15
TUBB3-204ENST00000554116 A0A0G2JMZ2 1700 aa14.11□□□□□ -0.15
TUBB3-204ENST00000554116 A0A1W2PRG0 241 aa14.11□□□□□ -0.15
TUBB3-204ENST00000554116 SMCHD1A6NHR9 2005 aa14.11□□□□□ -0.15
TUBB3-204ENST00000554116 SPDYE16A6NNV3 312 aaPredicted RBP14.11□□□□□ -0.15
TUBB3-204ENST00000554116 PDE3AQ14432 1141 aa14.11□□□□□ -0.15
TUBB3-204ENST00000554116 GRB14Q14449 540 aa14.11□□□□□ -0.15
TUBB3-204ENST00000554116 ZKSCAN2Q63HK3 967 aa14.11□□□□□ -0.15
TUBB3-204ENST00000554116 MAGEB6Q8N7X4 407 aa14.11□□□□□ -0.15
TUBB3-204ENST00000554116 GTF3C2Q8WUA4 911 aaPredicted RBP14.11□□□□□ -0.15
TUBB3-204ENST00000554116 SERPINB13Q9UIV8 391 aa14.11□□□□□ -0.15
TUBB3-204ENST00000554116 PARP14Q460N5 1801 aa14.11□□□□□ -0.15
TUBB3-204ENST00000554116 ZNFX1Q9P2E3 1918 aaKnown RBP14.1□□□□□ -0.15
TUBB3-204ENST00000554116 SLC15A5A6NIM6 579 aa14.1□□□□□ -0.15
TUBB3-204ENST00000554116 IDH1O75874 414 aaKnown RBP14.1□□□□□ -0.15
TUBB3-204ENST00000554116 HLA-DOAP06340 250 aa14.1□□□□□ -0.15
TUBB3-204ENST00000554116 CYP2C19P33261 490 aa14.1□□□□□ -0.15
TUBB3-204ENST00000554116 FAM109BQ6ICB4 259 aaPredicted RBP14.1□□□□□ -0.15
TUBB3-204ENST00000554116 SIAH1Q8IUQ4 282 aa14.1□□□□□ -0.15
TUBB3-204ENST00000554116 GUCD1Q96NT3 240 aa14.1□□□□□ -0.15
TUBB3-204ENST00000554116 ZNF236Q9UL36 1845 aa14.1□□□□□ -0.15
TUBB3-204ENST00000554116 NAV1Q8NEY1 1877 aa14.1□□□□□ -0.15
TUBB3-204ENST00000554116 CHD7Q9P2D1 2997 aa14.09□□□□□ -0.15
TUBB3-204ENST00000554116 SMIM22K7EJ46 135 aa14.09□□□□□ -0.15
TUBB3-204ENST00000554116 CYBAP13498 195 aa14.09□□□□□ -0.15
TUBB3-204ENST00000554116 SEPT2Q15019 361 aa14.09□□□□□ -0.15
TUBB3-204ENST00000554116 RAB3GAP1Q15042 981 aa14.09□□□□□ -0.15
TUBB3-204ENST00000554116 ABCB5Q2M3G0 1257 aa14.09□□□□□ -0.15
TUBB3-204ENST00000554116 CERKLQ49MI3 558 aaPredicted RBP14.09□□□□□ -0.15
TUBB3-204ENST00000554116 TRIM34Q9BYJ4 488 aa14.09□□□□□ -0.15
TUBB3-204ENST00000554116 SENP6Q9GZR1 1112 aaPredicted RBP14.09□□□□□ -0.15
TUBB3-204ENST00000554116 DDX20Q9UHI6 824 aaKnown RBP14.09□□□□□ -0.15
TUBB3-204ENST00000554116 COBLO75128 1261 aa14.08□□□□□ -0.16
TUBB3-204ENST00000554116 USP5P45974 858 aa14.08□□□□□ -0.16
TUBB3-204ENST00000554116 OS9Q13438 667 aaPredicted RBP14.08□□□□□ -0.16
TUBB3-204ENST00000554116 LPAR1Q92633 364 aa14.08□□□□□ -0.16
TUBB3-204ENST00000554116 MOV10L1Q9BXT6 1211 aaKnown RBP14.08□□□□□ -0.16
TUBB3-204ENST00000554116 RPAP3Q9H6T3 665 aaPredicted RBP14.08□□□□□ -0.16
TUBB3-204ENST00000554116 ATN1P54259 1190 aaPredicted RBP14.07□□□□□ -0.16
TUBB3-204ENST00000554116 USP14P54578 494 aa14.07□□□□□ -0.16
TUBB3-204ENST00000554116 MFSD14CQ5VZR4 134 aa14.07□□□□□ -0.16
TUBB3-204ENST00000554116 CEP85Q6P2H3 762 aa14.07□□□□□ -0.16
TUBB3-204ENST00000554116 CCAR1Q8IX12 1150 aaKnown RBP14.07□□□□□ -0.16
TUBB3-204ENST00000554116 FTSJ3Q8IY81 847 aaKnown RBP14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms