RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 DEFB132Q7Z7B7 95 aa4.89□□□□□ -1.63
SLIRP-202ENST00000553981 C14orf37Q86TY3 774 aa4.89□□□□□ -1.63
SLIRP-202ENST00000553981 WFDC3Q8IUB2 231 aa4.89□□□□□ -1.63
SLIRP-202ENST00000553981 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.89□□□□□ -1.63
SLIRP-202ENST00000553981 DDX54Q8TDD1 881 aaKnown RBP4.89□□□□□ -1.63
SLIRP-202ENST00000553981 WDR18Q9BV38 432 aa4.89□□□□□ -1.63
SLIRP-202ENST00000553981 DAGLAQ9Y4D2 1042 aa4.89□□□□□ -1.63
SLIRP-202ENST00000553981 COL22A1Q8NFW1 1626 aaPredicted RBP4.89□□□□□ -1.63
SLIRP-202ENST00000553981 NUP155O75694 1391 aa4.89□□□□□ -1.63
SLIRP-202ENST00000553981 PLEKHH1Q9ULM0 1364 aa4.89□□□□□ -1.63
SLIRP-202ENST00000553981 PXDNQ92626 1479 aa4.88□□□□□ -1.63
SLIRP-202ENST00000553981 JAG1P78504 1218 aa4.88□□□□□ -1.63
SLIRP-202ENST00000553981 ORC1Q13415 861 aa4.88□□□□□ -1.63
SLIRP-202ENST00000553981 PDE3AQ14432 1141 aa4.88□□□□□ -1.63
SLIRP-202ENST00000553981 OGFOD3Q6PK18 319 aa4.88□□□□□ -1.63
SLIRP-202ENST00000553981 ZNF574Q6ZN55 896 aaPredicted RBP4.88□□□□□ -1.63
SLIRP-202ENST00000553981 POU5F2Q8N7G0 328 aa4.88□□□□□ -1.63
SLIRP-202ENST00000553981 BCL7CQ8WUZ0 217 aaPredicted RBP4.88□□□□□ -1.63
SLIRP-202ENST00000553981 LRRC59Q96AG4 307 aaKnown RBP4.88□□□□□ -1.63
SLIRP-202ENST00000553981 EHD4Q9H223 541 aa4.88□□□□□ -1.63
SLIRP-202ENST00000553981 LGR6Q9HBX8 967 aa4.88□□□□□ -1.63
SLIRP-202ENST00000553981 NPHS2Q9NP85 383 aa4.88□□□□□ -1.63
SLIRP-202ENST00000553981 EGFL7Q9UHF1 273 aa4.88□□□□□ -1.63
SLIRP-202ENST00000553981 BRPF3Q9ULD4 1205 aa4.88□□□□□ -1.63
SLIRP-202ENST00000553981 PPP1R9AQ9ULJ8 1098 aa4.88□□□□□ -1.63
SLIRP-202ENST00000553981 ROCK1Q13464 1354 aa4.88□□□□□ -1.63
SLIRP-202ENST00000553981 MARF1Q9Y4F3 1742 aaKnown RBP4.87□□□□□ -1.63
SLIRP-202ENST00000553981 TMPRSS2O15393 492 aa4.87□□□□□ -1.63
SLIRP-202ENST00000553981 PAPLNO95428 1278 aa4.87□□□□□ -1.63
SLIRP-202ENST00000553981 C8AP07357 584 aa4.87□□□□□ -1.63
SLIRP-202ENST00000553981 ITGAEP38570 1179 aa4.87□□□□□ -1.63
SLIRP-202ENST00000553981 LCE1DQ5T752 114 aa4.87□□□□□ -1.63
SLIRP-202ENST00000553981 WAPLQ7Z5K2 1190 aa4.87□□□□□ -1.63
SLIRP-202ENST00000553981 SPRED2Q7Z698 418 aa4.87□□□□□ -1.63
SLIRP-202ENST00000553981 ABCB6Q9NP58 842 aa4.87□□□□□ -1.63
SLIRP-202ENST00000553981 SLC5A6Q9Y289 635 aa4.87□□□□□ -1.63
SLIRP-202ENST00000553981 SYNGAP1Q96PV0 1343 aa4.87□□□□□ -1.63
SLIRP-202ENST00000553981 H3BRB1 525 aa4.86□□□□□ -1.63
SLIRP-202ENST00000553981 CPNE3O75131 537 aaKnown RBP4.86□□□□□ -1.63
SLIRP-202ENST00000553981 NEFLP07196 543 aa4.86□□□□□ -1.63
SLIRP-202ENST00000553981 LIG1P18858 919 aa4.86□□□□□ -1.63
SLIRP-202ENST00000553981 SERPINB4P48594 390 aa4.86□□□□□ -1.63
SLIRP-202ENST00000553981 PTPN12Q05209 780 aaKnown RBP4.86□□□□□ -1.63
SLIRP-202ENST00000553981 AP3B2Q13367 1082 aa4.86□□□□□ -1.63
SLIRP-202ENST00000553981 GLYCTKQ8IVS8 523 aa4.86□□□□□ -1.63
SLIRP-202ENST00000553981 WDR89Q96FK6 387 aaPredicted RBP4.86□□□□□ -1.63
SLIRP-202ENST00000553981 FAM129BQ96TA1 746 aa4.86□□□□□ -1.63
SLIRP-202ENST00000553981 TUT1Q9H6E5 874 aaKnown RBP4.86□□□□□ -1.63
SLIRP-202ENST00000553981 C1orf115Q9H7X2 142 aa4.86□□□□□ -1.63
SLIRP-202ENST00000553981 ADGRF5Q8IZF2 1346 aa4.86□□□□□ -1.63
SLIRP-202ENST00000553981 PTCH1Q13635 1447 aa4.86□□□□□ -1.63
SLIRP-202ENST00000553981 PRAG1Q86YV5 1406 aa4.86□□□□□ -1.63
SLIRP-202ENST00000553981 SLIT2O94813 1529 aa4.86□□□□□ -1.63
SLIRP-202ENST00000553981 RGPD8O14715 1765 aaPredicted RBP4.86□□□□□ -1.63
SLIRP-202ENST00000553981 PPLO60437 1756 aa4.86□□□□□ -1.63
SLIRP-202ENST00000553981 ZNF157P51786 506 aaPredicted RBP4.85□□□□□ -1.63
SLIRP-202ENST00000553981 ARHGAP4P98171 946 aa4.85□□□□□ -1.63
SLIRP-202ENST00000553981 BNIP3Q12983 259 aa4.85□□□□□ -1.63
SLIRP-202ENST00000553981 PLCL1Q15111 1095 aa4.85□□□□□ -1.63
SLIRP-202ENST00000553981 ZNF792Q3KQV3 632 aa4.85□□□□□ -1.63
SLIRP-202ENST00000553981 CYP27C1Q4G0S4 372 aa4.85□□□□□ -1.63
SLIRP-202ENST00000553981 ZNF326Q5BKZ1 582 aaKnown RBP4.85□□□□□ -1.63
SLIRP-202ENST00000553981 PRPF40BQ6NWY9 871 aaKnown RBP4.85□□□□□ -1.63
SLIRP-202ENST00000553981 STK11IPQ8N1F8 1099 aa4.85□□□□□ -1.63
SLIRP-202ENST00000553981 PLD6Q8N2A8 252 aaKnown RBP4.85□□□□□ -1.63
SLIRP-202ENST00000553981 CCDC86Q9H6F5 360 aaKnown RBP4.85□□□□□ -1.63
SLIRP-202ENST00000553981 CRIM1Q9NZV1 1036 aa4.85□□□□□ -1.63
SLIRP-202ENST00000553981 TRPC5Q9UL62 973 aaPredicted RBP4.85□□□□□ -1.63
SLIRP-202ENST00000553981 NAIPQ13075 1403 aa4.85□□□□□ -1.63
SLIRP-202ENST00000553981 RALGAPBQ86X10 1494 aa4.85□□□□□ -1.63
SLIRP-202ENST00000553981 TNKS1BP1Q9C0C2 1729 aaKnown RBP4.84□□□□□ -1.63
SLIRP-202ENST00000553981 TMEM238LA0A1B0GVL6 79 aa4.84□□□□□ -1.63
SLIRP-202ENST00000553981 NDUFB5O43674 189 aa4.84□□□□□ -1.63
SLIRP-202ENST00000553981 ZNF862O60290 1169 aa4.84□□□□□ -1.63
SLIRP-202ENST00000553981 FAM87AP0C7U9 286 aa4.84□□□□□ -1.63
SLIRP-202ENST00000553981 FAAP100Q0VG06 881 aa4.84□□□□□ -1.63
SLIRP-202ENST00000553981 CDK5R2Q13319 367 aa4.84□□□□□ -1.63
SLIRP-202ENST00000553981 PDE3BQ13370 1112 aa4.84□□□□□ -1.63
SLIRP-202ENST00000553981 RPS26P11Q5JNZ5 115 aaPredicted RBP4.84□□□□□ -1.63
SLIRP-202ENST00000553981 TMEM132EQ6IEE7 984 aa4.84□□□□□ -1.63
SLIRP-202ENST00000553981 CCDC74AQ96AQ1 378 aa4.84□□□□□ -1.63
SLIRP-202ENST00000553981 MISP3Q96FF7 219 aa4.84□□□□□ -1.63
SLIRP-202ENST00000553981 FANCD2OSQ96PS1 177 aa4.84□□□□□ -1.63
SLIRP-202ENST00000553981 KRTAP4-7Q9BYR0 210 aa4.84□□□□□ -1.63
SLIRP-202ENST00000553981 ZC3H12CQ9C0D7 883 aaKnown RBP4.84□□□□□ -1.63
SLIRP-202ENST00000553981 PIDD1Q9HB75 910 aa4.84□□□□□ -1.63
SLIRP-202ENST00000553981 KIF1BO60333 1816 aa4.83□□□□□ -1.64
SLIRP-202ENST00000553981 ABCA3Q99758 1704 aa4.83□□□□□ -1.64
SLIRP-202ENST00000553981 USP32Q8NFA0 1604 aa4.83□□□□□ -1.64
SLIRP-202ENST00000553981 SPATA31A3Q5VYP0 1347 aa4.83□□□□□ -1.64
SLIRP-202ENST00000553981 EIF1AYO14602 144 aaKnown RBP4.83□□□□□ -1.64
SLIRP-202ENST00000553981 IGHA2P01877 340 aa4.83□□□□□ -1.64
SLIRP-202ENST00000553981 CD8BP10966 210 aa4.83□□□□□ -1.64
SLIRP-202ENST00000553981 ID3Q02535 119 aa4.83□□□□□ -1.64
SLIRP-202ENST00000553981 FAM181AQ8N9Y4 354 aa4.83□□□□□ -1.64
SLIRP-202ENST00000553981 GLIS3Q8NEA6 775 aa4.83□□□□□ -1.64
SLIRP-202ENST00000553981 NETO1Q8TDF5 533 aa4.83□□□□□ -1.64
SLIRP-202ENST00000553981 ATXN3LQ9H3M9 355 aa4.83□□□□□ -1.64
SLIRP-202ENST00000553981 PCDHGC5Q9Y5F6 944 aa4.83□□□□□ -1.64
SLIRP-202ENST00000553981 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms