RNA–Protein interactions for RNA: ENST00000553945.1

NEK9-203, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 786 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-203ENST00000553945 SKAP1Q86WV1 359 aa27.73■■■□□ 2.03
NEK9-203ENST00000553945 ACER1Q8TDN7 264 aa27.73■■■□□ 2.03
NEK9-203ENST00000553945 SLC45A1Q9Y2W3 748 aa27.73■■■□□ 2.03
NEK9-203ENST00000553945 SLC3A2P08195 630 aaKnown RBP27.72■■■□□ 2.03
NEK9-203ENST00000553945 HSPD1P10809 573 aaKnown RBP27.72■■■□□ 2.03
NEK9-203ENST00000553945 SP3Q02447 781 aa27.72■■■□□ 2.03
NEK9-203ENST00000553945 PPARAQ07869 468 aa27.72■■■□□ 2.03
NEK9-203ENST00000553945 ALX1Q15699 326 aa27.72■■■□□ 2.03
NEK9-203ENST00000553945 USP17L2Q6R6M4 530 aa27.72■■■□□ 2.03
NEK9-203ENST00000553945 RASA1P20936 1047 aa27.71■■■□□ 2.03
NEK9-203ENST00000553945 PABPC4Q13310 644 aaKnown RBP eCLIP27.71■■■□□ 2.03
NEK9-203ENST00000553945 ZNF287Q9HBT7 754 aa27.71■■■□□ 2.03
NEK9-203ENST00000553945 CPA4Q9UI42 421 aa27.71■■■□□ 2.03
NEK9-203ENST00000553945 CTU1Q7Z7A3 348 aaKnown RBP27.7■■■□□ 2.02
NEK9-203ENST00000553945 CLEC10AQ8IUN9 316 aa27.7■■■□□ 2.02
NEK9-203ENST00000553945 ERO1AQ96HE7 468 aa27.7■■■□□ 2.02
NEK9-203ENST00000553945 KIAA1683Q9H0B3 1180 aa27.7■■■□□ 2.02
NEK9-203ENST00000553945 EMILIN3Q9NT22 766 aa27.7■■■□□ 2.02
NEK9-203ENST00000553945 PNMA3Q9UL41 463 aa27.7■■■□□ 2.02
NEK9-203ENST00000553945 PRDM1O75626 825 aa27.69■■■□□ 2.02
NEK9-203ENST00000553945 FGAP02671 866 aa27.69■■■□□ 2.02
NEK9-203ENST00000553945 PDE4BQ07343 736 aa27.69■■■□□ 2.02
NEK9-203ENST00000553945 ZNF444Q8N0Y2 327 aaPredicted RBP27.69■■■□□ 2.02
NEK9-203ENST00000553945 CD99L2Q8TCZ2 262 aa27.69■■■□□ 2.02
NEK9-203ENST00000553945 ADGRA2Q96PE1 1338 aa27.68■■■□□ 2.02
NEK9-203ENST00000553945 OSBPP22059 807 aa27.68■■■□□ 2.02
NEK9-203ENST00000553945 USP14P54578 494 aa27.68■■■□□ 2.02
NEK9-203ENST00000553945 ICA1Q05084 483 aa27.68■■■□□ 2.02
NEK9-203ENST00000553945 CTDSPL2Q05D32 466 aa27.68■■■□□ 2.02
NEK9-203ENST00000553945 C17orf99Q6UX52 265 aa27.68■■■□□ 2.02
NEK9-203ENST00000553945 SMCR8Q8TEV9 937 aaPredicted RBP27.68■■■□□ 2.02
NEK9-203ENST00000553945 A0A1W2PRG0 241 aa27.67■■■□□ 2.02
NEK9-203ENST00000553945 ARHGEF10LQ9HCE6 1279 aa27.67■■■□□ 2.02
NEK9-203ENST00000553945 CHMLP26374 656 aa27.66■■■□□ 2.02
NEK9-203ENST00000553945 ATP2B2Q01814 1243 aa27.66■■■□□ 2.02
NEK9-203ENST00000553945 C12orf42Q96LP6 360 aa27.66■■■□□ 2.02
NEK9-203ENST00000553945 MCOLN1Q9GZU1 580 aa27.66■■■□□ 2.02
NEK9-203ENST00000553945 ASCC2Q9H1I8 757 aaPredicted RBP27.66■■■□□ 2.02
NEK9-203ENST00000553945 KANSL2Q9H9L4 492 aa27.66■■■□□ 2.02
NEK9-203ENST00000553945 ANAPC4Q9UJX5 808 aa27.66■■■□□ 2.02
NEK9-203ENST00000553945 IRX3P78415 501 aaPredicted RBP27.65■■■□□ 2.02
NEK9-203ENST00000553945 SIAH1Q8IUQ4 282 aa27.65■■■□□ 2.02
NEK9-203ENST00000553945 RUFY2Q8WXA3 655 aa27.65■■■□□ 2.02
NEK9-203ENST00000553945 GNL3Q9BVP2 549 aaKnown RBP eCLIP27.65■■■□□ 2.02
NEK9-203ENST00000553945 ZMYM6O95789 1325 aa27.65■■■□□ 2.02
NEK9-203ENST00000553945 EEF2P13639 858 aaKnown RBP27.64■■■□□ 2.02
NEK9-203ENST00000553945 HOXA7P31268 230 aaPredicted RBP27.64■■■□□ 2.02
NEK9-203ENST00000553945 ERICH6BQ5W0A0 696 aa27.64■■■□□ 2.02
NEK9-203ENST00000553945 SH2D4AQ9H788 454 aa27.64■■■□□ 2.02
NEK9-203ENST00000553945 INCENPQ9NQS7 918 aa27.64■■■□□ 2.02
NEK9-203ENST00000553945 PPP4R2Q9NY27 417 aa27.64■■■□□ 2.02
NEK9-203ENST00000553945 TRIM17Q9Y577 477 aa27.64■■■□□ 2.02
NEK9-203ENST00000553945 GREB1LQ9C091 1923 aaPredicted RBP27.64■■■□□ 2.02
NEK9-203ENST00000553945 ECM2O94769 699 aaPredicted RBP27.63■■■□□ 2.01
NEK9-203ENST00000553945 BCRP11274 1271 aa27.63■■■□□ 2.01
NEK9-203ENST00000553945 HAND2P61296 217 aa27.63■■■□□ 2.01
NEK9-203ENST00000553945 KIF22Q14807 665 aa27.63■■■□□ 2.01
NEK9-203ENST00000553945 IL25Q9H293 177 aa27.63■■■□□ 2.01
NEK9-203ENST00000553945 TMX2Q9Y320 296 aa27.63■■■□□ 2.01
NEK9-203ENST00000553945 VCAM1P19320 739 aa27.62■■■□□ 2.01
NEK9-203ENST00000553945 LACTBP83111 547 aaPredicted RBP27.62■■■□□ 2.01
NEK9-203ENST00000553945 FAM47AQ5JRC9 791 aa27.62■■■□□ 2.01
NEK9-203ENST00000553945 EFCC1Q9HA90 598 aa27.62■■■□□ 2.01
NEK9-203ENST00000553945 DDX52Q9Y2R4 599 aaKnown RBP eCLIP27.62■■■□□ 2.01
NEK9-203ENST00000553945 RAD50Q92878 1312 aa27.62■■■□□ 2.01
NEK9-203ENST00000553945 USP17L15C9J2P7 530 aa27.61■■■□□ 2.01
NEK9-203ENST00000553945 USP17L13C9JLJ4 530 aa27.61■■■□□ 2.01
NEK9-203ENST00000553945 USP17L11C9JVI0 530 aa27.61■■■□□ 2.01
NEK9-203ENST00000553945 USP17L18D6R9N7 530 aa27.61■■■□□ 2.01
NEK9-203ENST00000553945 USP17L22D6RA61 530 aa27.61■■■□□ 2.01
NEK9-203ENST00000553945 USP17L17D6RBQ6 530 aa27.61■■■□□ 2.01
NEK9-203ENST00000553945 USP17L19D6RCP7 530 aa27.61■■■□□ 2.01
NEK9-203ENST00000553945 USP17L20D6RJB6 530 aa27.61■■■□□ 2.01
NEK9-203ENST00000553945 TSPY3P0CV98 308 aa27.61■■■□□ 2.01
NEK9-203ENST00000553945 TSPY8P0CW00 308 aa27.61■■■□□ 2.01
NEK9-203ENST00000553945 CAP1Q01518 475 aa27.61■■■□□ 2.01
NEK9-203ENST00000553945 TFAP4Q01664 338 aa27.61■■■□□ 2.01
NEK9-203ENST00000553945 USP17L24Q0WX57 530 aa27.61■■■□□ 2.01
NEK9-203ENST00000553945 ARHGEF6Q15052 776 aa27.61■■■□□ 2.01
NEK9-203ENST00000553945 OTOP1Q7RTM1 612 aa27.61■■■□□ 2.01
NEK9-203ENST00000553945 DSCC1Q9BVC3 393 aa27.61■■■□□ 2.01
NEK9-203ENST00000553945 ZSWIM8A7E2V4 1837 aa27.6■■■□□ 2.01
NEK9-203ENST00000553945 GCLCP48506 637 aaPredicted RBP27.6■■■□□ 2.01
NEK9-203ENST00000553945 PKN2Q16513 984 aaKnown RBP27.6■■■□□ 2.01
NEK9-203ENST00000553945 ANKRD13CQ8N6S4 541 aa27.6■■■□□ 2.01
NEK9-203ENST00000553945 P2RX7Q99572 595 aaKnown RBP27.6■■■□□ 2.01
NEK9-203ENST00000553945 ARHGAP39Q9C0H5 1083 aa27.6■■■□□ 2.01
NEK9-203ENST00000553945 RPAP3Q9H6T3 665 aaPredicted RBP27.6■■■□□ 2.01
NEK9-203ENST00000553945 TOMM22Q9NS69 142 aa27.6■■■□□ 2.01
NEK9-203ENST00000553945 TACC3Q9Y6A5 838 aa27.6■■■□□ 2.01
NEK9-203ENST00000553945 IGKV6D-41A0A0C4DH26 115 aa27.59■■■□□ 2.01
NEK9-203ENST00000553945 RANBP6O60518 1105 aaKnown RBP27.59■■■□□ 2.01
NEK9-203ENST00000553945 HERVK_113P62684 666 aa27.59■■■□□ 2.01
NEK9-203ENST00000553945 NEDD1Q8NHV4 660 aa27.59■■■□□ 2.01
NEK9-203ENST00000553945 VCPKMTQ9H867 229 aa27.59■■■□□ 2.01
NEK9-203ENST00000553945 LAMA4Q16363 1823 aa27.58■■■□□ 2.01
NEK9-203ENST00000553945 TSPY2A6NKD2 308 aa27.58■■■□□ 2.01
NEK9-203ENST00000553945 ZNF213O14771 459 aa27.58■■■□□ 2.01
NEK9-203ENST00000553945 BMP2KLQ5H9B9 411 aa27.58■■■□□ 2.01
NEK9-203ENST00000553945 RRP12Q5JTH9 1297 aaKnown RBP27.58■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms