RNA–Protein interactions for RNA: ENST00000553727.1

SV2B-204, Transcript of synaptic vesicle glycoprotein 2B, humanhuman

TSL 4

Gene SV2B, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SV2B-204ENST00000553727 TBC1D8O95759 1140 aa16.92■□□□□ 0.3
SV2B-204ENST00000553727 ALDH1A1P00352 501 aa16.92■□□□□ 0.3
SV2B-204ENST00000553727 TSPY3P0CV98 308 aa16.92■□□□□ 0.3
SV2B-204ENST00000553727 TSPY8P0CW00 308 aa16.92■□□□□ 0.3
SV2B-204ENST00000553727 TFAP4Q01664 338 aa16.92■□□□□ 0.3
SV2B-204ENST00000553727 ICA1Q05084 483 aa16.92■□□□□ 0.3
SV2B-204ENST00000553727 DGKZQ13574 1117 aa16.92■□□□□ 0.3
SV2B-204ENST00000553727 MFSD6Q6ZSS7 791 aa16.92■□□□□ 0.3
SV2B-204ENST00000553727 ANO2Q9NQ90 1003 aa16.92■□□□□ 0.3
SV2B-204ENST00000553727 TMOD4Q9NZQ9 345 aa16.92■□□□□ 0.3
SV2B-204ENST00000553727 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.92■□□□□ 0.3
SV2B-204ENST00000553727 TACC3Q9Y6A5 838 aa16.92■□□□□ 0.3
SV2B-204ENST00000553727 U3KPZ7 1027 aaPredicted RBP16.92■□□□□ 0.3
SV2B-204ENST00000553727 TSPY2A6NKD2 308 aa16.91■□□□□ 0.3
SV2B-204ENST00000553727 C19orf81C9J6K1 198 aa16.91■□□□□ 0.3
SV2B-204ENST00000553727 PDHXO00330 501 aa16.91■□□□□ 0.3
SV2B-204ENST00000553727 MOGSQ13724 837 aa16.91■□□□□ 0.3
SV2B-204ENST00000553727 AKNAD1Q5T1N1 836 aa16.91■□□□□ 0.3
SV2B-204ENST00000553727 TBC1D10CQ8IV04 446 aa16.91■□□□□ 0.3
SV2B-204ENST00000553727 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.91■□□□□ 0.3
SV2B-204ENST00000553727 NBPF3Q9H094 633 aa16.91■□□□□ 0.3
SV2B-204ENST00000553727 RNF41Q9H4P4 317 aaPredicted RBP16.91■□□□□ 0.3
SV2B-204ENST00000553727 KANSL2Q9H9L4 492 aa16.91■□□□□ 0.3
SV2B-204ENST00000553727 ARHGEF10LQ9HCE6 1279 aa16.91■□□□□ 0.3
SV2B-204ENST00000553727 SAGE1Q9NXZ1 904 aa16.91■□□□□ 0.3
SV2B-204ENST00000553727 GTF3C3Q9Y5Q9 886 aa16.91■□□□□ 0.3
SV2B-204ENST00000553727 ORC4O43929 436 aa16.9■□□□□ 0.3
SV2B-204ENST00000553727 EEF2P13639 858 aaKnown RBP16.9■□□□□ 0.3
SV2B-204ENST00000553727 CTCFP49711 727 aaPredicted RBP16.9■□□□□ 0.3
SV2B-204ENST00000553727 TAF1CQ15572 869 aaPredicted RBP16.9■□□□□ 0.3
SV2B-204ENST00000553727 SH3D19Q5HYK7 790 aa16.9■□□□□ 0.3
SV2B-204ENST00000553727 GPAT2Q6NUI2 795 aa16.9■□□□□ 0.3
SV2B-204ENST00000553727 USP17L2Q6R6M4 530 aa16.9■□□□□ 0.3
SV2B-204ENST00000553727 ANKRD23Q86SG2 305 aa16.9■□□□□ 0.3
SV2B-204ENST00000553727 MAP4K1Q92918 833 aa16.9■□□□□ 0.3
SV2B-204ENST00000553727 LSG1Q9H089 658 aaKnown RBP16.9■□□□□ 0.3
SV2B-204ENST00000553727 RBM8AQ9Y5S9 174 aaKnown RBP16.9■□□□□ 0.3
SV2B-204ENST00000553727 ATAD5Q96QE3 1844 aa16.89■□□□□ 0.29
SV2B-204ENST00000553727 A0A1W2PRG0 241 aa16.89■□□□□ 0.29
SV2B-204ENST00000553727 FGRP09769 529 aa16.89■□□□□ 0.29
SV2B-204ENST00000553727 CRHR2Q13324 411 aa16.89■□□□□ 0.29
SV2B-204ENST00000553727 TREML2Q5T2D2 321 aa16.89■□□□□ 0.29
SV2B-204ENST00000553727 SIAH1Q8IUQ4 282 aa16.89■□□□□ 0.29
SV2B-204ENST00000553727 PROCA1Q8NCQ7 364 aaPredicted RBP16.89■□□□□ 0.29
SV2B-204ENST00000553727 NEDD1Q8NHV4 660 aa16.89■□□□□ 0.29
SV2B-204ENST00000553727 STAG1Q8WVM7 1258 aa16.89■□□□□ 0.29
SV2B-204ENST00000553727 KIAA1683Q9H0B3 1180 aa16.89■□□□□ 0.29
SV2B-204ENST00000553727 ZFYVE28Q9HCC9 887 aa16.89■□□□□ 0.29
SV2B-204ENST00000553727 EMILIN3Q9NT22 766 aa16.89■□□□□ 0.29
SV2B-204ENST00000553727 AGTPBP1Q9UPW5 1226 aa16.89■□□□□ 0.29
SV2B-204ENST00000553727 LAMB1P07942 1786 aa16.89■□□□□ 0.29
SV2B-204ENST00000553727 RAD21O60216 631 aa16.88■□□□□ 0.29
SV2B-204ENST00000553727 HSPA8P11142 646 aaKnown RBP16.88■□□□□ 0.29
SV2B-204ENST00000553727 PCP11498 1178 aaKnown RBP16.88■□□□□ 0.29
SV2B-204ENST00000553727 LBX1P52954 281 aa16.88■□□□□ 0.29
SV2B-204ENST00000553727 USP14P54578 494 aa16.88■□□□□ 0.29
SV2B-204ENST00000553727 CEP95Q96GE4 821 aa16.88■□□□□ 0.29
SV2B-204ENST00000553727 R3HDMLQ9H3Y0 253 aa16.88■□□□□ 0.29
SV2B-204ENST00000553727 SH2D4AQ9H788 454 aa16.88■□□□□ 0.29
SV2B-204ENST00000553727 ZCCHC17Q9NP64 241 aaKnown RBP16.88■□□□□ 0.29
SV2B-204ENST00000553727 CLIP2Q9UDT6 1046 aa16.88■□□□□ 0.29
SV2B-204ENST00000553727 CYP21A2P08686 494 aa16.87■□□□□ 0.29
SV2B-204ENST00000553727 ESR2Q92731 530 aa16.87■□□□□ 0.29
SV2B-204ENST00000553727 MTMR4Q9NYA4 1195 aa16.87■□□□□ 0.29
SV2B-204ENST00000553727 TMX2Q9Y320 296 aa16.87■□□□□ 0.29
SV2B-204ENST00000553727 NEDD4P46934 1319 aa16.87■□□□□ 0.29
SV2B-204ENST00000553727 PHIPQ8WWQ0 1821 aa16.86■□□□□ 0.29
SV2B-204ENST00000553727 IGKV6D-41A0A0C4DH26 115 aa16.86■□□□□ 0.29
SV2B-204ENST00000553727 B4E1Z4 1266 aa16.86■□□□□ 0.29
SV2B-204ENST00000553727 NMT2O60551 498 aa16.86■□□□□ 0.29
SV2B-204ENST00000553727 CYP2C8P10632 490 aa16.86■□□□□ 0.29
SV2B-204ENST00000553727 PABPC4Q13310 644 aaKnown RBP eCLIP16.86■□□□□ 0.29
SV2B-204ENST00000553727 NYAP2Q9P242 653 aa16.86■□□□□ 0.29
SV2B-204ENST00000553727 KDM4AO75164 1064 aa16.85■□□□□ 0.29
SV2B-204ENST00000553727 TTLL1O95922 423 aa16.85■□□□□ 0.29
SV2B-204ENST00000553727 OSBPP22059 807 aa16.85■□□□□ 0.29
SV2B-204ENST00000553727 TRDNQ13061 729 aa16.85■□□□□ 0.29
SV2B-204ENST00000553727 SPICE1Q8N0Z3 855 aa16.85■□□□□ 0.29
SV2B-204ENST00000553727 NKX2-3Q8TAU0 364 aa16.85■□□□□ 0.29
SV2B-204ENST00000553727 C12orf42Q96LP6 360 aa16.85■□□□□ 0.29
SV2B-204ENST00000553727 PARK7Q99497 189 aaKnown RBP16.85■□□□□ 0.29
SV2B-204ENST00000553727 KRT23Q9C075 422 aa16.85■□□□□ 0.29
SV2B-204ENST00000553727 VCPKMTQ9H867 229 aa16.85■□□□□ 0.29
SV2B-204ENST00000553727 CNNM2Q9H8M5 875 aa16.85■□□□□ 0.29
SV2B-204ENST00000553727 IL17RBQ9NRM6 502 aa16.85■□□□□ 0.29
SV2B-204ENST00000553727 PNMA3Q9UL41 463 aa16.85■□□□□ 0.29
SV2B-204ENST00000553727 STX8Q9UNK0 236 aa16.85■□□□□ 0.29
SV2B-204ENST00000553727 SLC45A1Q9Y2W3 748 aa16.85■□□□□ 0.29
SV2B-204ENST00000553727 MYH8P13535 1937 aa16.84■□□□□ 0.29
SV2B-204ENST00000553727 GPR25O00155 361 aa16.84■□□□□ 0.29
SV2B-204ENST00000553727 SLC27A2O14975 620 aa16.84■□□□□ 0.29
SV2B-204ENST00000553727 VCAM1P19320 739 aa16.84■□□□□ 0.29
SV2B-204ENST00000553727 IRX3P78415 501 aaPredicted RBP16.84■□□□□ 0.29
SV2B-204ENST00000553727 KIAA1755Q5JYT7 1200 aa16.84■□□□□ 0.29
SV2B-204ENST00000553727 LRRC47Q8N1G4 583 aaKnown RBP16.84■□□□□ 0.29
SV2B-204ENST00000553727 SMCR8Q8TEV9 937 aaPredicted RBP16.84■□□□□ 0.29
SV2B-204ENST00000553727 ZKSCAN3Q9BRR0 538 aa16.84■□□□□ 0.29
SV2B-204ENST00000553727 CFHR5Q9BXR6 569 aa16.84■□□□□ 0.29
SV2B-204ENST00000553727 ASCC2Q9H1I8 757 aaPredicted RBP16.84■□□□□ 0.29
SV2B-204ENST00000553727 GOPCQ9HD26 462 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms