RNA–Protein interactions for RNA: ENST00000553726.5

PRKCH-205, Transcript of protein kinase C eta, humanhuman

TSL 5

Gene PRKCH, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-205ENST00000553726 LPIN3Q9BQK8 851 aa9.29□□□□□ -0.92
PRKCH-205ENST00000553726 MKNK1Q9BUB5 465 aa9.29□□□□□ -0.92
PRKCH-205ENST00000553726 TLR7Q9NYK1 1049 aaKnown RBP9.29□□□□□ -0.92
PRKCH-205ENST00000553726 GTF3C3Q9Y5Q9 886 aa9.29□□□□□ -0.92
PRKCH-205ENST00000553726 KCNMB2Q9Y691 235 aa9.29□□□□□ -0.92
PRKCH-205ENST00000553726 DLEC1Q9Y238 1755 aa9.29□□□□□ -0.92
PRKCH-205ENST00000553726 SIPA1L3O60292 1781 aaPredicted RBP9.28□□□□□ -0.92
PRKCH-205ENST00000553726 C9orf172C9J069 976 aa9.28□□□□□ -0.92
PRKCH-205ENST00000553726 LMNB1P20700 586 aa9.28□□□□□ -0.92
PRKCH-205ENST00000553726 PDE6BP35913 854 aa9.28□□□□□ -0.92
PRKCH-205ENST00000553726 DMRTC2Q8IXT2 367 aaPredicted RBP9.28□□□□□ -0.92
PRKCH-205ENST00000553726 TTC9Q92623 222 aa9.28□□□□□ -0.92
PRKCH-205ENST00000553726 ZNF496Q96IT1 587 aaPredicted RBP9.28□□□□□ -0.92
PRKCH-205ENST00000553726 BRIP1Q9BX63 1249 aa9.28□□□□□ -0.92
PRKCH-205ENST00000553726 NMRK2Q9NPI5 230 aa9.28□□□□□ -0.92
PRKCH-205ENST00000553726 COL3A1P02461 1466 aaPredicted RBP9.28□□□□□ -0.92
PRKCH-205ENST00000553726 CEMIPQ8WUJ3 1361 aa9.27□□□□□ -0.93
PRKCH-205ENST00000553726 TNRC6CQ9HCJ0 1690 aaKnown RBP9.27□□□□□ -0.93
PRKCH-205ENST00000553726 BTBD11A6QL63 1104 aa9.27□□□□□ -0.93
PRKCH-205ENST00000553726 TNFRSF10BO14763 440 aa9.27□□□□□ -0.93
PRKCH-205ENST00000553726 NAA30Q147X3 362 aaPredicted RBP9.27□□□□□ -0.93
PRKCH-205ENST00000553726 GRIK5Q16478 980 aa9.27□□□□□ -0.93
PRKCH-205ENST00000553726 C2CD5Q86YS7 1000 aa9.27□□□□□ -0.93
PRKCH-205ENST00000553726 RTF1Q92541 710 aaKnown RBP9.27□□□□□ -0.93
PRKCH-205ENST00000553726 HTATSF1O43719 755 aaKnown RBP9.26□□□□□ -0.93
PRKCH-205ENST00000553726 SELPP16109 830 aa9.26□□□□□ -0.93
PRKCH-205ENST00000553726 FAM26DQ5JW98 314 aa9.26□□□□□ -0.93
PRKCH-205ENST00000553726 CLEC4GQ6UXB4 293 aa9.26□□□□□ -0.93
PRKCH-205ENST00000553726 HFE2Q6ZVN8 426 aa9.26□□□□□ -0.93
PRKCH-205ENST00000553726 FMR1NBQ8N0W7 255 aaPredicted RBP9.26□□□□□ -0.93
PRKCH-205ENST00000553726 DNAJC5GQ8N7S2 189 aa9.26□□□□□ -0.93
PRKCH-205ENST00000553726 SETDB2Q96T68 719 aa9.26□□□□□ -0.93
PRKCH-205ENST00000553726 SEMA6BQ9H3T3 888 aa9.26□□□□□ -0.93
PRKCH-205ENST00000553726 CCDC88AQ3V6T2 1871 aa9.25□□□□□ -0.93
PRKCH-205ENST00000553726 CARMIL3Q8ND23 1372 aa9.25□□□□□ -0.93
PRKCH-205ENST00000553726 GLTPD2A6NH11 291 aa9.25□□□□□ -0.93
PRKCH-205ENST00000553726 NPHP1O15259 732 aa9.25□□□□□ -0.93
PRKCH-205ENST00000553726 MMP20O60882 483 aa9.25□□□□□ -0.93
PRKCH-205ENST00000553726 PSAPP07602 524 aa9.25□□□□□ -0.93
PRKCH-205ENST00000553726 VEGFAP15692 232 aaPredicted RBP9.25□□□□□ -0.93
PRKCH-205ENST00000553726 PRKAR2BP31323 418 aa9.25□□□□□ -0.93
PRKCH-205ENST00000553726 PLAURQ03405 335 aa9.25□□□□□ -0.93
PRKCH-205ENST00000553726 CNGB1Q14028 1251 aaPredicted RBP9.25□□□□□ -0.93
PRKCH-205ENST00000553726 TBC1D9BQ66K14 1250 aa9.25□□□□□ -0.93
PRKCH-205ENST00000553726 SMC1BQ8NDV3 1235 aa9.25□□□□□ -0.93
PRKCH-205ENST00000553726 LENG1Q96BZ8 264 aaPredicted RBP9.25□□□□□ -0.93
PRKCH-205ENST00000553726 SMG9Q9H0W8 520 aaKnown RBP9.25□□□□□ -0.93
PRKCH-205ENST00000553726 TPSG1Q9NRR2 321 aa9.25□□□□□ -0.93
PRKCH-205ENST00000553726 FAM13BQ9NYF5 915 aa9.25□□□□□ -0.93
PRKCH-205ENST00000553726 SCN7AQ01118 1682 aa9.24□□□□□ -0.93
PRKCH-205ENST00000553726 A1BGP04217 495 aa9.24□□□□□ -0.93
PRKCH-205ENST00000553726 NEFMP07197 916 aa9.24□□□□□ -0.93
PRKCH-205ENST00000553726 SNRPA1P09661 255 aaKnown RBP9.24□□□□□ -0.93
PRKCH-205ENST00000553726 U2AF1L5P0DN76 240 aaPredicted RBP9.24□□□□□ -0.93
PRKCH-205ENST00000553726 ST5P78524 1137 aa9.24□□□□□ -0.93
PRKCH-205ENST00000553726 U2AF1Q01081 240 aaKnown RBP eCLIP9.24□□□□□ -0.93
PRKCH-205ENST00000553726 NRG1Q02297 640 aaPredicted RBP9.24□□□□□ -0.93
PRKCH-205ENST00000553726 ADGRE1Q14246 886 aa9.24□□□□□ -0.93
PRKCH-205ENST00000553726 RSPO4Q2I0M5 234 aaPredicted RBP9.24□□□□□ -0.93
PRKCH-205ENST00000553726 SOGA3Q5TF21 947 aa9.24□□□□□ -0.93
PRKCH-205ENST00000553726 PRR5LQ6MZQ0 368 aa9.24□□□□□ -0.93
PRKCH-205ENST00000553726 DTWD1Q8N5C7 304 aa9.24□□□□□ -0.93
PRKCH-205ENST00000553726 PIK3R5Q8WYR1 880 aa9.24□□□□□ -0.93
PRKCH-205ENST00000553726 ZNF622Q969S3 477 aaKnown RBP eCLIP9.24□□□□□ -0.93
PRKCH-205ENST00000553726 PHACTR3Q96KR7 559 aa9.24□□□□□ -0.93
PRKCH-205ENST00000553726 ZNF652Q9Y2D9 606 aa9.24□□□□□ -0.93
PRKCH-205ENST00000553726 WDR90Q96KV7 1748 aa9.24□□□□□ -0.93
PRKCH-205ENST00000553726 DICER1Q9UPY3 1922 aaKnown RBP9.23□□□□□ -0.93
PRKCH-205ENST00000553726 HOXD8P13378 290 aaPredicted RBP9.23□□□□□ -0.93
PRKCH-205ENST00000553726 EIF2AK2P19525 551 aaKnown RBP9.23□□□□□ -0.93
PRKCH-205ENST00000553726 PPP2R1AP30153 589 aa9.23□□□□□ -0.93
PRKCH-205ENST00000553726 SOX18P35713 384 aa9.23□□□□□ -0.93
PRKCH-205ENST00000553726 MBTPS1Q14703 1052 aa9.23□□□□□ -0.93
PRKCH-205ENST00000553726 TRIP4Q15650 581 aaPredicted RBP9.23□□□□□ -0.93
PRKCH-205ENST00000553726 NKAPLQ5M9Q1 402 aa9.23□□□□□ -0.93
PRKCH-205ENST00000553726 STYK1Q6J9G0 422 aa9.23□□□□□ -0.93
PRKCH-205ENST00000553726 SHISA2Q6UWI4 295 aa9.23□□□□□ -0.93
PRKCH-205ENST00000553726 WFDC8Q8IUA0 241 aa9.23□□□□□ -0.93
PRKCH-205ENST00000553726 CNBD1Q8NA66 436 aa9.23□□□□□ -0.93
PRKCH-205ENST00000553726 STIM2Q9P246 746 aa9.23□□□□□ -0.93
PRKCH-205ENST00000553726 USP16Q9Y5T5 823 aa9.23□□□□□ -0.93
PRKCH-205ENST00000553726 LTBP3Q9NS15 1303 aa9.23□□□□□ -0.93
PRKCH-205ENST00000553726 ANKRD31Q8N7Z5 1873 aa9.23□□□□□ -0.93
PRKCH-205ENST00000553726 FER1L6Q2WGJ9 1857 aa9.22□□□□□ -0.93
PRKCH-205ENST00000553726 J3QW42 95 aa9.22□□□□□ -0.93
PRKCH-205ENST00000553726 CAMTA2O94983 1202 aa9.22□□□□□ -0.93
PRKCH-205ENST00000553726 SRGNP10124 158 aa9.22□□□□□ -0.93
PRKCH-205ENST00000553726 ATP2B4P23634 1241 aa9.22□□□□□ -0.93
PRKCH-205ENST00000553726 ITGB7P26010 798 aa9.22□□□□□ -0.93
PRKCH-205ENST00000553726 TAF7Q15545 349 aaPredicted RBP9.22□□□□□ -0.93
PRKCH-205ENST00000553726 TPTE2Q6XPS3 522 aa9.22□□□□□ -0.93
PRKCH-205ENST00000553726 FBXO11Q86XK2 927 aa9.22□□□□□ -0.93
PRKCH-205ENST00000553726 PNISRQ8TF01 805 aaKnown RBP9.22□□□□□ -0.93
PRKCH-205ENST00000553726 MASTLQ96GX5 879 aa9.22□□□□□ -0.93
PRKCH-205ENST00000553726 PNNQ9H307 717 aaKnown RBP9.22□□□□□ -0.93
PRKCH-205ENST00000553726 NFKBIEO00221 500 aa9.21□□□□□ -0.94
PRKCH-205ENST00000553726 ZAP70P43403 619 aa9.21□□□□□ -0.94
PRKCH-205ENST00000553726 TXNRD3Q86VQ6 643 aa9.21□□□□□ -0.94
PRKCH-205ENST00000553726 JMYQ8N9B5 988 aa9.21□□□□□ -0.94
PRKCH-205ENST00000553726 PLD4Q96BZ4 506 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms