RNA–Protein interactions for RNA: ENST00000553709.5

ARHGEF40-202, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 5,204 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-202ENST00000553709 GPATCH11Q8N954 259 aa17.12■□□□□ 0.33
ARHGEF40-202ENST00000553709 UBLCP1Q8WVY7 318 aaPredicted RBP17.12■□□□□ 0.33
ARHGEF40-202ENST00000553709 NOX5Q96PH1 765 aa17.12■□□□□ 0.33
ARHGEF40-202ENST00000553709 SH2D4AQ9H788 454 aa17.12■□□□□ 0.33
ARHGEF40-202ENST00000553709 hCG_1642624A0A1W2PR95 340 aa17.12■□□□□ 0.33
ARHGEF40-202ENST00000553709 ZNF500O60304 480 aaPredicted RBP17.12■□□□□ 0.33
ARHGEF40-202ENST00000553709 NAP1L3Q99457 506 aaPredicted RBP17.12■□□□□ 0.33
ARHGEF40-202ENST00000553709 ARID4AP29374 1257 aaPredicted RBP17.12■□□□□ 0.33
ARHGEF40-202ENST00000553709 CTSWP56202 376 aa17.12■□□□□ 0.33
ARHGEF40-202ENST00000553709 ASIC2Q16515 512 aa17.12■□□□□ 0.33
ARHGEF40-202ENST00000553709 CCNL1Q9UK58 526 aaPredicted RBP17.12■□□□□ 0.33
ARHGEF40-202ENST00000553709 B4DLN1 442 aa17.12■□□□□ 0.33
ARHGEF40-202ENST00000553709 SREK1Q8WXA9 508 aaKnown RBP17.12■□□□□ 0.33
ARHGEF40-202ENST00000553709 SLC9C1Q4G0N8 1177 aa17.11■□□□□ 0.33
ARHGEF40-202ENST00000553709 FCHSD1Q86WN1 690 aa17.11■□□□□ 0.33
ARHGEF40-202ENST00000553709 NOSTRINQ8IVI9 506 aa17.11■□□□□ 0.33
ARHGEF40-202ENST00000553709 AFAP1L1Q8TED9 768 aa17.11■□□□□ 0.33
ARHGEF40-202ENST00000553709 CEP83Q9Y592 693 aa17.11■□□□□ 0.33
ARHGEF40-202ENST00000553709 CALUO43852 315 aaPredicted RBP17.11■□□□□ 0.33
ARHGEF40-202ENST00000553709 TNFAIP3P21580 790 aa17.11■□□□□ 0.33
ARHGEF40-202ENST00000553709 STAMQ92783 540 aa17.11■□□□□ 0.33
ARHGEF40-202ENST00000553709 FAM212AQ96EL1 285 aa17.11■□□□□ 0.33
ARHGEF40-202ENST00000553709 GAS2L3Q86XJ1 694 aa17.11■□□□□ 0.33
ARHGEF40-202ENST00000553709 ERBB3P21860 1342 aa17.11■□□□□ 0.33
ARHGEF40-202ENST00000553709 COMMD10Q9Y6G5 202 aa17.11■□□□□ 0.33
ARHGEF40-202ENST00000553709 TECPR2O15040 1411 aa17.1■□□□□ 0.33
ARHGEF40-202ENST00000553709 UTP14CQ5TAP6 766 aaKnown RBP17.1■□□□□ 0.33
ARHGEF40-202ENST00000553709 CABP7Q86V35 215 aa17.1■□□□□ 0.33
ARHGEF40-202ENST00000553709 MAP4K1Q92918 833 aa17.1■□□□□ 0.33
ARHGEF40-202ENST00000553709 BLZF1Q9H2G9 400 aa17.1■□□□□ 0.33
ARHGEF40-202ENST00000553709 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.1■□□□□ 0.332e-6■■□□□ 12.4
ARHGEF40-202ENST00000553709 ADCY9O60503 1353 aa17.1■□□□□ 0.33
ARHGEF40-202ENST00000553709 BACH1O14867 736 aa17.1■□□□□ 0.33
ARHGEF40-202ENST00000553709 TFAP4Q01664 338 aa17.1■□□□□ 0.33
ARHGEF40-202ENST00000553709 MSANTD4Q8NCY6 345 aa17.1■□□□□ 0.33
ARHGEF40-202ENST00000553709 SLF1Q9BQI6 1058 aa17.1■□□□□ 0.33
ARHGEF40-202ENST00000553709 MAST3O60307 1309 aa17.1■□□□□ 0.33
ARHGEF40-202ENST00000553709 CHMP2AO43633 222 aa17.1■□□□□ 0.33
ARHGEF40-202ENST00000553709 PKD2L1Q9P0L9 805 aa17.1■□□□□ 0.33
ARHGEF40-202ENST00000553709 REREQ9P2R6 1566 aa17.1■□□□□ 0.33
ARHGEF40-202ENST00000553709 ZMYM6O95789 1325 aa17.1■□□□□ 0.33
ARHGEF40-202ENST00000553709 CMA1P23946 247 aa17.1■□□□□ 0.33
ARHGEF40-202ENST00000553709 MAGEA1P43355 309 aa17.1■□□□□ 0.33
ARHGEF40-202ENST00000553709 LONRF3Q496Y0 759 aa17.1■□□□□ 0.33
ARHGEF40-202ENST00000553709 HERC4Q5GLZ8 1057 aaPredicted RBP17.1■□□□□ 0.33
ARHGEF40-202ENST00000553709 RASEFQ8IZ41 740 aa17.1■□□□□ 0.33
ARHGEF40-202ENST00000553709 COPRSQ9NQ92 184 aa17.1■□□□□ 0.33
ARHGEF40-202ENST00000553709 CCDC6Q16204 474 aa17.09■□□□□ 0.33
ARHGEF40-202ENST00000553709 DYMQ7RTS9 669 aa17.09■□□□□ 0.33
ARHGEF40-202ENST00000553709 CCDC97Q96F63 343 aaPredicted RBP17.09■□□□□ 0.33
ARHGEF40-202ENST00000553709 WWC3Q9ULE0 1092 aa17.09■□□□□ 0.33
ARHGEF40-202ENST00000553709 CALCRLQ16602 461 aa17.09■□□□□ 0.33
ARHGEF40-202ENST00000553709 UNC5CLQ8IV45 518 aa17.09■□□□□ 0.33
ARHGEF40-202ENST00000553709 IFNL3Q8IZI9 196 aa17.09■□□□□ 0.33
ARHGEF40-202ENST00000553709 CCDC114Q96M63 670 aa17.09■□□□□ 0.33
ARHGEF40-202ENST00000553709 SAMD15Q9P1V8 674 aa17.09■□□□□ 0.33
ARHGEF40-202ENST00000553709 ERBB4Q15303 1308 aa17.09■□□□□ 0.33
ARHGEF40-202ENST00000553709 FERP16591 822 aa17.09■□□□□ 0.33
ARHGEF40-202ENST00000553709 TTLL7Q6ZT98 887 aa17.09■□□□□ 0.33
ARHGEF40-202ENST00000553709 CCDC84Q86UT8 332 aaPredicted RBP17.09■□□□□ 0.33
ARHGEF40-202ENST00000553709 STK24Q9Y6E0 443 aa17.09■□□□□ 0.33
ARHGEF40-202ENST00000553709 ZNF335Q9H4Z2 1342 aaPredicted RBP17.09■□□□□ 0.33
ARHGEF40-202ENST00000553709 SPOPO43791 374 aa17.09■□□□□ 0.33
ARHGEF40-202ENST00000553709 PDE6AP16499 860 aa17.09■□□□□ 0.33
ARHGEF40-202ENST00000553709 CHAMP1Q96JM3 812 aa17.09■□□□□ 0.33
ARHGEF40-202ENST00000553709 CEP63Q96MT8 703 aa17.09■□□□□ 0.33
ARHGEF40-202ENST00000553709 ARPP21Q9UBL0 812 aaPredicted RBP17.09■□□□□ 0.33
ARHGEF40-202ENST00000553709 ADD1P35611 737 aaKnown RBP17.08■□□□□ 0.33
ARHGEF40-202ENST00000553709 MXRA7P84157 204 aa17.08■□□□□ 0.33
ARHGEF40-202ENST00000553709 KIFAP3Q92845 792 aa17.08■□□□□ 0.33
ARHGEF40-202ENST00000553709 CCDC51Q96ER9 411 aa17.08■□□□□ 0.33
ARHGEF40-202ENST00000553709 KCNK9Q9NPC2 374 aa17.08■□□□□ 0.33
ARHGEF40-202ENST00000553709 FGAP02671 866 aa17.08■□□□□ 0.32
ARHGEF40-202ENST00000553709 SP4Q02446 784 aa17.08■□□□□ 0.32
ARHGEF40-202ENST00000553709 ZBTB16Q05516 673 aa17.08■□□□□ 0.32
ARHGEF40-202ENST00000553709 GABPB1Q06547 395 aaPredicted RBP17.08■□□□□ 0.32
ARHGEF40-202ENST00000553709 FAM47AQ5JRC9 791 aa17.08■□□□□ 0.32
ARHGEF40-202ENST00000553709 MAPKAPK5Q8IW41 473 aa17.08■□□□□ 0.32
ARHGEF40-202ENST00000553709 IFT20Q8IY31 132 aa17.08■□□□□ 0.32
ARHGEF40-202ENST00000553709 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.08■□□□□ 0.32
ARHGEF40-202ENST00000553709 ADCK5Q3MIX3 580 aa17.08■□□□□ 0.32
ARHGEF40-202ENST00000553709 RBM26Q5T8P6 1007 aaKnown RBP17.08■□□□□ 0.32
ARHGEF40-202ENST00000553709 NCAPH2Q6IBW4 605 aa17.08■□□□□ 0.32
ARHGEF40-202ENST00000553709 MRFAP1L1Q96HT8 127 aa17.08■□□□□ 0.32
ARHGEF40-202ENST00000553709 PCDHA7Q9UN72 937 aa17.08■□□□□ 0.32
ARHGEF40-202ENST00000553709 ADKP55263 362 aaKnown RBP17.08■□□□□ 0.32
ARHGEF40-202ENST00000553709 RNASE9P60153 205 aaKnown RBP17.08■□□□□ 0.32
ARHGEF40-202ENST00000553709 LRRC24Q50LG9 513 aa17.08■□□□□ 0.32
ARHGEF40-202ENST00000553709 DPH6Q7L8W6 267 aa17.08■□□□□ 0.32
ARHGEF40-202ENST00000553709 JDP2Q8WYK2 163 aa17.08■□□□□ 0.32
ARHGEF40-202ENST00000553709 CD2BP2O95400 341 aaKnown RBP17.07■□□□□ 0.32
ARHGEF40-202ENST00000553709 SLC1A4P43007 532 aa17.07■□□□□ 0.32
ARHGEF40-202ENST00000553709 KRBA2Q6ZNG9 492 aa17.07■□□□□ 0.32
ARHGEF40-202ENST00000553709 REXO1Q8N1G1 1221 aaKnown RBP17.07■□□□□ 0.32
ARHGEF40-202ENST00000553709 BCL2L12Q9HB09 334 aa17.07■□□□□ 0.32
ARHGEF40-202ENST00000553709 ARHGEF10LQ9HCE6 1279 aa17.07■□□□□ 0.32
ARHGEF40-202ENST00000553709 KRT5P13647 590 aa17.07■□□□□ 0.32
ARHGEF40-202ENST00000553709 WDR44Q5JSH3 913 aa17.07■□□□□ 0.32
ARHGEF40-202ENST00000553709 FNBP1Q96RU3 617 aa17.07■□□□□ 0.32
ARHGEF40-202ENST00000553709 GTF2A1P52655 376 aaPredicted RBP17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms