RNA–Protein interactions for RNA: ENST00000553535.2

SIX1-202, Transcript of SIX homeobox 1, humanhuman

TSL 3

Gene SIX1, Length 1,556 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1-202ENST00000553535 PDE6AP16499 860 aa15.08■□□□□ 0
SIX1-202ENST00000553535 CERKLQ49MI3 558 aaPredicted RBP15.08■□□□□ 0
SIX1-202ENST00000553535 SLC9C2Q5TAH2 1124 aa15.08■□□□□ 0
SIX1-202ENST00000553535 C12orf42Q96LP6 360 aa15.08■□□□□ 0
SIX1-202ENST00000553535 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.08■□□□□ 0
SIX1-202ENST00000553535 TCRBV5S4A2TA0A5A2 114 aa15.07■□□□□ 0
SIX1-202ENST00000553535 APBB1O00213 710 aa15.07■□□□□ 0
SIX1-202ENST00000553535 RAB11FIP3O75154 756 aa15.07■□□□□ 0
SIX1-202ENST00000553535 SHMT1P34896 483 aa15.07■□□□□ 0
SIX1-202ENST00000553535 TRIM32Q13049 653 aa15.07■□□□□ 0
SIX1-202ENST00000553535 RPTORQ8N122 1335 aa15.07■□□□□ 0
SIX1-202ENST00000553535 ZNF532Q9HCE3 1301 aa15.07■□□□□ 0
SIX1-202ENST00000553535 GOLIM4O00461 696 aa15.07■□□□□ 0
SIX1-202ENST00000553535 IFIT2P09913 472 aaKnown RBP15.07■□□□□ 0
SIX1-202ENST00000553535 ERVK-9P63128 1117 aa15.07■□□□□ 0
SIX1-202ENST00000553535 ERVK-24P63145 666 aa15.07■□□□□ 0
SIX1-202ENST00000553535 GABPAQ06546 454 aa15.07■□□□□ 0
SIX1-202ENST00000553535 ABCB5Q2M3G0 1257 aa15.07■□□□□ 0
SIX1-202ENST00000553535 ACER1Q8TDN7 264 aa15.07■□□□□ 0
SIX1-202ENST00000553535 GTF3C2Q8WUA4 911 aaPredicted RBP15.07■□□□□ 0
SIX1-202ENST00000553535 TRIB2Q92519 343 aa15.07■□□□□ 0
SIX1-202ENST00000553535 USP6NLQ92738 828 aa15.07■□□□□ 0
SIX1-202ENST00000553535 KIAA1683Q9H0B3 1180 aa15.07■□□□□ 0
SIX1-202ENST00000553535 DDX60LQ5H9U9 1706 aaKnown RBP15.06■□□□□ 0
SIX1-202ENST00000553535 USP17L15C9J2P7 530 aa15.06■□□□□ 0
SIX1-202ENST00000553535 USP17L13C9JLJ4 530 aa15.06■□□□□ 0
SIX1-202ENST00000553535 USP17L11C9JVI0 530 aa15.06■□□□□ 0
SIX1-202ENST00000553535 USP17L18D6R9N7 530 aa15.06■□□□□ 0
SIX1-202ENST00000553535 USP17L22D6RA61 530 aa15.06■□□□□ 0
SIX1-202ENST00000553535 USP17L17D6RBQ6 530 aa15.06■□□□□ 0
SIX1-202ENST00000553535 USP17L19D6RCP7 530 aa15.06■□□□□ 0
SIX1-202ENST00000553535 USP17L20D6RJB6 530 aa15.06■□□□□ 0
SIX1-202ENST00000553535 POLR3DP05423 398 aaPredicted RBP15.06■□□□□ 0
SIX1-202ENST00000553535 XRCC5P13010 732 aaKnown RBP15.06■□□□□ 0
SIX1-202ENST00000553535 CYP2B6P20813 491 aa15.06■□□□□ 0
SIX1-202ENST00000553535 MAPK4P31152 587 aa15.06■□□□□ 0
SIX1-202ENST00000553535 GUCY1A2P33402 732 aa15.06■□□□□ 0
SIX1-202ENST00000553535 USP17L24Q0WX57 530 aa15.06■□□□□ 0
SIX1-202ENST00000553535 RAB3GAP1Q15042 981 aa15.06■□□□□ 0
SIX1-202ENST00000553535 EDC3Q96F86 508 aaKnown RBP15.06■□□□□ 0
SIX1-202ENST00000553535 PAWRQ96IZ0 340 aaKnown RBP15.06■□□□□ 0
SIX1-202ENST00000553535 DNAJC2Q99543 621 aaKnown RBP15.06■□□□□ 0
SIX1-202ENST00000553535 NUDT12Q9BQG2 462 aa15.06■□□□□ 0
SIX1-202ENST00000553535 CRNKL1Q9BZJ0 848 aaKnown RBP15.06■□□□□ 0
SIX1-202ENST00000553535 PORCNQ9H237 461 aa15.06■□□□□ 0
SIX1-202ENST00000553535 HMX1Q9NP08 348 aaPredicted RBP15.06■□□□□ 0
SIX1-202ENST00000553535 CABP5Q9NP86 173 aa15.06■□□□□ 0
SIX1-202ENST00000553535 NR2E3Q9Y5X4 410 aa15.06■□□□□ 0
SIX1-202ENST00000553535 USP14P54578 494 aa15.05■□□□□ -0
SIX1-202ENST00000553535 ZYXQ15942 572 aaKnown RBP15.05■□□□□ -0
SIX1-202ENST00000553535 MAP3K21Q5TCX8 1036 aa15.05■□□□□ -0
SIX1-202ENST00000553535 CATSPERGQ6ZRH7 1159 aa15.05■□□□□ -0
SIX1-202ENST00000553535 SOCS4Q8WXH5 440 aa15.05■□□□□ -0
SIX1-202ENST00000553535 FEZ1Q99689 392 aa15.05■□□□□ -0
SIX1-202ENST00000553535 PAGR1Q9BTK6 254 aa15.05■□□□□ -0
SIX1-202ENST00000553535 PRO3102Q9H379 93 aa15.05■□□□□ -0
SIX1-202ENST00000553535 CHMP4BQ9H444 224 aaKnown RBP15.05■□□□□ -0
SIX1-202ENST00000553535 RCAN3Q9UKA8 241 aa15.05■□□□□ -0
SIX1-202ENST00000553535 RABGAP1Q9Y3P9 1069 aa15.05■□□□□ -0
SIX1-202ENST00000553535 NAV1Q8NEY1 1877 aa15.04■□□□□ -0
SIX1-202ENST00000553535 SZT2Q5T011 3432 aa15.04■□□□□ -0
SIX1-202ENST00000553535 CNMDO75829 334 aa15.04■□□□□ -0
SIX1-202ENST00000553535 CLCN6P51797 869 aa15.04■□□□□ -0
SIX1-202ENST00000553535 MORN1Q5T089 497 aa15.04■□□□□ -0
SIX1-202ENST00000553535 GPR142Q7Z601 462 aa15.04■□□□□ -0
SIX1-202ENST00000553535 ANKLE1Q8NAG6 615 aa15.04■□□□□ -0
SIX1-202ENST00000553535 DCP1AQ9NPI6 582 aaPredicted RBP15.04■□□□□ -0
SIX1-202ENST00000553535 MCM9Q9NXL9 1143 aa15.04■□□□□ -0
SIX1-202ENST00000553535 RBM27Q9P2N5 1060 aaKnown RBP15.04■□□□□ -0
SIX1-202ENST00000553535 ALPK3Q96L96 1907 aa15.04■□□□□ -0
SIX1-202ENST00000553535 ATP5JP18859 108 aa15.03■□□□□ -0
SIX1-202ENST00000553535 VCAM1P19320 739 aa15.03■□□□□ -0
SIX1-202ENST00000553535 MNX1P50219 401 aaPredicted RBP15.03■□□□□ -0
SIX1-202ENST00000553535 SEPT2Q15019 361 aa15.03■□□□□ -0
SIX1-202ENST00000553535 LBX2Q6XYB7 198 aa15.03■□□□□ -0
SIX1-202ENST00000553535 NECAB2Q7Z6G3 386 aa15.03■□□□□ -0
SIX1-202ENST00000553535 PLEKHH3Q7Z736 793 aa15.03■□□□□ -0
SIX1-202ENST00000553535 TRMT44Q8IYL2 757 aaKnown RBP15.03■□□□□ -0
SIX1-202ENST00000553535 LCORLQ8N3X6 602 aa15.03■□□□□ -0
SIX1-202ENST00000553535 DIS3LQ8TF46 1054 aaKnown RBP15.03■□□□□ -0
SIX1-202ENST00000553535 SDR42E1Q8WUS8 393 aa15.03■□□□□ -0
SIX1-202ENST00000553535 BOLA2Q9H3K6 86 aa15.03■□□□□ -0
SIX1-202ENST00000553535 PAG1Q9NWQ8 432 aa15.03■□□□□ -0
SIX1-202ENST00000553535 EVI5O60447 810 aa15.02■□□□□ -0
SIX1-202ENST00000553535 ADD2P35612 726 aa15.02■□□□□ -0
SIX1-202ENST00000553535 PDE3AQ14432 1141 aa15.02■□□□□ -0
SIX1-202ENST00000553535 SLFNL1Q499Z3 407 aa15.02■□□□□ -0
SIX1-202ENST00000553535 CCAR1Q8IX12 1150 aaKnown RBP15.02■□□□□ -0
SIX1-202ENST00000553535 BCL11AQ9H165 835 aa15.02■□□□□ -0
SIX1-202ENST00000553535 ARMT1Q9H993 441 aa15.02■□□□□ -0
SIX1-202ENST00000553535 OGDHLQ9ULD0 1010 aa15.02■□□□□ -0
SIX1-202ENST00000553535 A0A1W2PRG0 241 aa15.02□□□□□ -0.01
SIX1-202ENST00000553535 CYP2D6P10635 497 aa15.02□□□□□ -0.01
SIX1-202ENST00000553535 RGS2P41220 211 aa15.02□□□□□ -0.01
SIX1-202ENST00000553535 HAUS7Q99871 368 aa15.02□□□□□ -0.01
SIX1-202ENST00000553535 BAZ2AQ9UIF9 1905 aaKnown RBP15.01□□□□□ -0.01
SIX1-202ENST00000553535 PRKAB2O43741 272 aa15.01□□□□□ -0.01
SIX1-202ENST00000553535 CCNA1P78396 465 aa15.01□□□□□ -0.01
SIX1-202ENST00000553535 CACNB2Q08289 660 aaPredicted RBP15.01□□□□□ -0.01
SIX1-202ENST00000553535 CCL14Q16627 93 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms