RNA–Protein interactions for RNA: ENST00000553290.1

ACTN1-207, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 619 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-207ENST00000553290 HDAC1Q13547 482 aaPredicted RBP15.57■□□□□ 0.08
ACTN1-207ENST00000553290 IRF5Q13568 498 aa15.57■□□□□ 0.08
ACTN1-207ENST00000553290 APPBP2Q92624 585 aa15.57■□□□□ 0.08
ACTN1-207ENST00000553290 PDE4DIPQ5VU43 2346 aa15.57■□□□□ 0.08
ACTN1-207ENST00000553290 BRCA2P51587 3418 aa15.56■□□□□ 0.08
ACTN1-207ENST00000553290 USP17L15C9J2P7 530 aa15.56■□□□□ 0.08
ACTN1-207ENST00000553290 USP17L13C9JLJ4 530 aa15.56■□□□□ 0.08
ACTN1-207ENST00000553290 USP17L11C9JVI0 530 aa15.56■□□□□ 0.08
ACTN1-207ENST00000553290 USP17L18D6R9N7 530 aa15.56■□□□□ 0.08
ACTN1-207ENST00000553290 USP17L22D6RA61 530 aa15.56■□□□□ 0.08
ACTN1-207ENST00000553290 USP17L17D6RBQ6 530 aa15.56■□□□□ 0.08
ACTN1-207ENST00000553290 USP17L19D6RCP7 530 aa15.56■□□□□ 0.08
ACTN1-207ENST00000553290 USP17L20D6RJB6 530 aa15.56■□□□□ 0.08
ACTN1-207ENST00000553290 MYCP01106 439 aaPredicted RBP15.56■□□□□ 0.08
ACTN1-207ENST00000553290 EN2P19622 333 aaPredicted RBP15.56■□□□□ 0.08
ACTN1-207ENST00000553290 MX1P20591 662 aa15.56■□□□□ 0.08
ACTN1-207ENST00000553290 UBXN2AP68543 259 aa15.56■□□□□ 0.08
ACTN1-207ENST00000553290 USP17L24Q0WX57 530 aa15.56■□□□□ 0.08
ACTN1-207ENST00000553290 SEPT2Q15019 361 aa15.56■□□□□ 0.08
ACTN1-207ENST00000553290 ZYXQ15942 572 aaKnown RBP15.56■□□□□ 0.08
ACTN1-207ENST00000553290 TMEM179Q6ZVK1 233 aa15.56■□□□□ 0.08
ACTN1-207ENST00000553290 PI4K2BQ8TCG2 481 aa15.56■□□□□ 0.08
ACTN1-207ENST00000553290 ACER1Q8TDN7 264 aa15.56■□□□□ 0.08
ACTN1-207ENST00000553290 PXYLP1Q8TE99 480 aa15.56■□□□□ 0.08
ACTN1-207ENST00000553290 DYNLL2Q96FJ2 89 aa15.56■□□□□ 0.08
ACTN1-207ENST00000553290 CCDC17Q96LX7 622 aa15.56■□□□□ 0.08
ACTN1-207ENST00000553290 STRBPQ96SI9 672 aaKnown RBP15.56■□□□□ 0.08
ACTN1-207ENST00000553290 BIN2Q9UBW5 565 aaPredicted RBP15.56■□□□□ 0.08
ACTN1-207ENST00000553290 DOCK3Q8IZD9 2030 aa15.56■□□□□ 0.08
ACTN1-207ENST00000553290 ADCY3O60266 1144 aa15.55■□□□□ 0.08
ACTN1-207ENST00000553290 CDK8P49336 464 aa15.55■□□□□ 0.08
ACTN1-207ENST00000553290 ANKRD45Q5TZF3 282 aa15.55■□□□□ 0.08
ACTN1-207ENST00000553290 GIMAP6Q6P9H5 292 aa15.55■□□□□ 0.08
ACTN1-207ENST00000553290 CTR9Q6PD62 1173 aa15.55■□□□□ 0.08
ACTN1-207ENST00000553290 C16orf86Q6ZW13 317 aa15.55■□□□□ 0.08
ACTN1-207ENST00000553290 SLC44A5Q8NCS7 719 aa15.55■□□□□ 0.08
ACTN1-207ENST00000553290 GPRC5AQ8NFJ5 357 aa15.55■□□□□ 0.08
ACTN1-207ENST00000553290 OSBP2Q969R2 916 aa15.55■□□□□ 0.08
ACTN1-207ENST00000553290 ARPP21Q9UBL0 812 aaPredicted RBP15.55■□□□□ 0.08
ACTN1-207ENST00000553290 MKI67P46013 3256 aaKnown RBP15.54■□□□□ 0.08
ACTN1-207ENST00000553290 CYP2D7A0A087X1C5 515 aa15.54■□□□□ 0.08
ACTN1-207ENST00000553290 GNAT2P19087 354 aa15.54■□□□□ 0.08
ACTN1-207ENST00000553290 VCAM1P19320 739 aa15.54■□□□□ 0.08
ACTN1-207ENST00000553290 MTFR1Q15390 333 aa15.54■□□□□ 0.08
ACTN1-207ENST00000553290 SBK1Q52WX2 424 aa15.54■□□□□ 0.08
ACTN1-207ENST00000553290 CATSPERGQ6ZRH7 1159 aa15.54■□□□□ 0.08
ACTN1-207ENST00000553290 OTUD7AQ8TE49 926 aaPredicted RBP15.54■□□□□ 0.08
ACTN1-207ENST00000553290 RBPJLQ9UBG7 517 aa15.54■□□□□ 0.08
ACTN1-207ENST00000553290 SALL3Q9BXA9 1300 aa15.53■□□□□ 0.08
ACTN1-207ENST00000553290 GSG1L2A8MUP6 293 aa15.53■□□□□ 0.08
ACTN1-207ENST00000553290 GPAA1O43292 621 aa15.53■□□□□ 0.08
ACTN1-207ENST00000553290 ERVK-9P63128 1117 aa15.53■□□□□ 0.08
ACTN1-207ENST00000553290 ERVK-24P63145 666 aa15.53■□□□□ 0.08
ACTN1-207ENST00000553290 NKX2-3Q8TAU0 364 aa15.53■□□□□ 0.08
ACTN1-207ENST00000553290 FSD1Q9BTV5 496 aa15.53■□□□□ 0.08
ACTN1-207ENST00000553290 SH2D4AQ9H788 454 aa15.53■□□□□ 0.08
ACTN1-207ENST00000553290 TXNRD2Q9NNW7 524 aa15.53■□□□□ 0.08
ACTN1-207ENST00000553290 RABGAP1Q9Y3P9 1069 aa15.53■□□□□ 0.08
ACTN1-207ENST00000553290 A0A1W2PRG0 241 aa15.52■□□□□ 0.08
ACTN1-207ENST00000553290 CCL5P13501 91 aa15.52■□□□□ 0.08
ACTN1-207ENST00000553290 AKR1B1P15121 316 aa15.52■□□□□ 0.08
ACTN1-207ENST00000553290 MAPK4P31152 587 aa15.52■□□□□ 0.08
ACTN1-207ENST00000553290 ICA1Q05084 483 aa15.52■□□□□ 0.08
ACTN1-207ENST00000553290 LBX2Q6XYB7 198 aa15.52■□□□□ 0.08
ACTN1-207ENST00000553290 CCAR1Q8IX12 1150 aaKnown RBP15.52■□□□□ 0.08
ACTN1-207ENST00000553290 PAGR1Q9BTK6 254 aa15.52■□□□□ 0.08
ACTN1-207ENST00000553290 RNF208Q9H0X6 261 aa15.52■□□□□ 0.08
ACTN1-207ENST00000553290 RWDD1Q9H446 243 aaPredicted RBP15.52■□□□□ 0.08
ACTN1-207ENST00000553290 RPAP3Q9H6T3 665 aaPredicted RBP15.52■□□□□ 0.08
ACTN1-207ENST00000553290 ARHGEF10LQ9HCE6 1279 aa15.52■□□□□ 0.08
ACTN1-207ENST00000553290 GJD2Q9UKL4 321 aa15.52■□□□□ 0.08
ACTN1-207ENST00000553290 SMIM22K7EJ46 135 aa15.51■□□□□ 0.07
ACTN1-207ENST00000553290 INHAP05111 366 aa15.51■□□□□ 0.07
ACTN1-207ENST00000553290 GJB1P08034 283 aa15.51■□□□□ 0.07
ACTN1-207ENST00000553290 ELNP15502 786 aa15.51■□□□□ 0.07
ACTN1-207ENST00000553290 CCNA1P78396 465 aa15.51■□□□□ 0.07
ACTN1-207ENST00000553290 Q3C1V9 767 aa15.51■□□□□ 0.07
ACTN1-207ENST00000553290 LPAR1Q92633 364 aa15.51■□□□□ 0.07
ACTN1-207ENST00000553290 STAP2Q9UGK3 403 aa15.51■□□□□ 0.07
ACTN1-207ENST00000553290 PATL2C9JE40 543 aaKnown RBP15.5■□□□□ 0.07
ACTN1-207ENST00000553290 M0R2C6 588 aa15.5■□□□□ 0.07
ACTN1-207ENST00000553290 APPP05067 770 aa15.5■□□□□ 0.07
ACTN1-207ENST00000553290 CAPN2P17655 700 aa15.5■□□□□ 0.07
ACTN1-207ENST00000553290 GJA8P48165 433 aa15.5■□□□□ 0.07
ACTN1-207ENST00000553290 ZMYM1Q5SVZ6 1142 aa15.5■□□□□ 0.07
ACTN1-207ENST00000553290 PRPF38BQ5VTL8 546 aaKnown RBP15.5■□□□□ 0.07
ACTN1-207ENST00000553290 POTEEQ6S8J3 1075 aa15.5■□□□□ 0.07
ACTN1-207ENST00000553290 SIAH1Q8IUQ4 282 aa15.5■□□□□ 0.07
ACTN1-207ENST00000553290 SOCS4Q8WXH5 440 aa15.5■□□□□ 0.07
ACTN1-207ENST00000553290 NUDT12Q9BQG2 462 aa15.5■□□□□ 0.07
ACTN1-207ENST00000553290 KANSL2Q9H9L4 492 aa15.5■□□□□ 0.07
ACTN1-207ENST00000553290 HOXC10Q9NYD6 342 aa15.5■□□□□ 0.07
ACTN1-207ENST00000553290 TMX2Q9Y320 296 aa15.5■□□□□ 0.07
ACTN1-207ENST00000553290 ROBO3Q96MS0 1386 aa15.49■□□□□ 0.07
ACTN1-207ENST00000553290 SPDYE16A6NNV3 312 aaPredicted RBP15.49■□□□□ 0.07
ACTN1-207ENST00000553290 MINDY4BA8MYZ0 360 aa15.49■□□□□ 0.07
ACTN1-207ENST00000553290 PEX10O60683 326 aa15.49■□□□□ 0.07
ACTN1-207ENST00000553290 HMGCRP04035 888 aa15.49■□□□□ 0.07
ACTN1-207ENST00000553290 TDO2P48775 406 aa15.49■□□□□ 0.07
ACTN1-207ENST00000553290 PDE1AP54750 535 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms