RNA–Protein interactions for RNA: ENST00000553099.5

RAB3IP-218, Transcript of RAB3A interacting protein, humanhuman

TSL 2 BASIC

Gene RAB3IP, Length 2,674 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-218ENST00000553099 EYA3Q99504 573 aa10.49□□□□□ -0.73
RAB3IP-218ENST00000553099 IL17RBQ9NRM6 502 aa10.49□□□□□ -0.73
RAB3IP-218ENST00000553099 DDX60LQ5H9U9 1706 aaKnown RBP10.48□□□□□ -0.73
RAB3IP-218ENST00000553099 ROBO3Q96MS0 1386 aa10.48□□□□□ -0.73
RAB3IP-218ENST00000553099 SLC39A14Q15043 492 aa10.48□□□□□ -0.73
RAB3IP-218ENST00000553099 SRBD1Q8N5C6 995 aaKnown RBP10.48□□□□□ -0.73
RAB3IP-218ENST00000553099 PDLIM2Q96JY6 352 aa10.48□□□□□ -0.73
RAB3IP-218ENST00000553099 SDF4Q9BRK5 362 aa10.48□□□□□ -0.73
RAB3IP-218ENST00000553099 RRAGDQ9NQL2 400 aaPredicted RBP10.48□□□□□ -0.73
RAB3IP-218ENST00000553099 GAKO14976 1311 aa10.48□□□□□ -0.73
RAB3IP-218ENST00000553099 CNTNAP5Q8WYK1 1306 aa10.48□□□□□ -0.73
RAB3IP-218ENST00000553099 A0A1W2PQ27 194 aa10.48□□□□□ -0.73
RAB3IP-218ENST00000553099 A0A1W2PQ64 194 aa10.48□□□□□ -0.73
RAB3IP-218ENST00000553099 A0A1W2PQD8 194 aa10.48□□□□□ -0.73
RAB3IP-218ENST00000553099 PRPF3O43395 683 aaKnown RBP10.48□□□□□ -0.73
RAB3IP-218ENST00000553099 WDHD1O75717 1129 aaPredicted RBP10.48□□□□□ -0.73
RAB3IP-218ENST00000553099 PTMAP06454 111 aaKnown RBP10.48□□□□□ -0.73
RAB3IP-218ENST00000553099 PKN1Q16512 942 aa10.48□□□□□ -0.73
RAB3IP-218ENST00000553099 UVSSAQ2YD98 709 aa10.48□□□□□ -0.73
RAB3IP-218ENST00000553099 RBM43Q6ZSC3 357 aaKnown RBP10.48□□□□□ -0.73
RAB3IP-218ENST00000553099 JMYQ8N9B5 988 aa10.48□□□□□ -0.73
RAB3IP-218ENST00000553099 ENGASEQ8NFI3 743 aa10.48□□□□□ -0.73
RAB3IP-218ENST00000553099 FAM200AQ8TCP9 573 aa10.48□□□□□ -0.73
RAB3IP-218ENST00000553099 DNAJC25Q9H1X3 360 aa10.48□□□□□ -0.73
RAB3IP-218ENST00000553099 ZNF287Q9HBT7 754 aa10.48□□□□□ -0.73
RAB3IP-218ENST00000553099 RASA1P20936 1047 aa10.47□□□□□ -0.73
RAB3IP-218ENST00000553099 KIF5BP33176 963 aa10.47□□□□□ -0.73
RAB3IP-218ENST00000553099 CDK8P49336 464 aa10.47□□□□□ -0.73
RAB3IP-218ENST00000553099 FUT2Q10981 343 aa10.47□□□□□ -0.73
RAB3IP-218ENST00000553099 LUZP1Q86V48 1076 aa10.47□□□□□ -0.73
RAB3IP-218ENST00000553099 FAM163AQ96GL9 167 aaPredicted RBP10.47□□□□□ -0.73
RAB3IP-218ENST00000553099 CAMKK2Q96RR4 588 aa10.47□□□□□ -0.73
RAB3IP-218ENST00000553099 FOXP1Q9H334 677 aaPredicted RBP10.47□□□□□ -0.73
RAB3IP-218ENST00000553099 KCNQ5Q9NR82 932 aa10.47□□□□□ -0.73
RAB3IP-218ENST00000553099 A0A087WWV3 80 aa10.47□□□□□ -0.73
RAB3IP-218ENST00000553099 ESPNB1AK53 854 aa10.47□□□□□ -0.73
RAB3IP-218ENST00000553099 CTAGE5O15320 804 aa10.47□□□□□ -0.73
RAB3IP-218ENST00000553099 PFKFB1P16118 471 aa10.47□□□□□ -0.73
RAB3IP-218ENST00000553099 DGKHQ86XP1 1220 aa10.47□□□□□ -0.73
RAB3IP-218ENST00000553099 FMR1NBQ8N0W7 255 aaPredicted RBP10.47□□□□□ -0.73
RAB3IP-218ENST00000553099 SHISA4Q96DD7 197 aa10.47□□□□□ -0.73
RAB3IP-218ENST00000553099 CLIC6Q96NY7 704 aa10.47□□□□□ -0.73
RAB3IP-218ENST00000553099 MAP3K14Q99558 947 aa10.47□□□□□ -0.73
RAB3IP-218ENST00000553099 PDGFDQ9GZP0 370 aaPredicted RBP10.47□□□□□ -0.73
RAB3IP-218ENST00000553099 CABP5Q9NP86 173 aa10.47□□□□□ -0.73
RAB3IP-218ENST00000553099 SCN9AQ15858 1988 aa10.46□□□□□ -0.73
RAB3IP-218ENST00000553099 KRT2P35908 639 aa10.46□□□□□ -0.73
RAB3IP-218ENST00000553099 PTPAQ15257 358 aa10.46□□□□□ -0.73
RAB3IP-218ENST00000553099 AXDND1Q5T1B0 1012 aaPredicted RBP10.46□□□□□ -0.73
RAB3IP-218ENST00000553099 C16orf86Q6ZW13 317 aa10.46□□□□□ -0.73
RAB3IP-218ENST00000553099 KIAA0825Q8IV33 1275 aa10.46□□□□□ -0.73
RAB3IP-218ENST00000553099 STAG2Q8N3U4 1231 aa10.46□□□□□ -0.73
RAB3IP-218ENST00000553099 FAM205CA6NFA0 338 aa10.46□□□□□ -0.74
RAB3IP-218ENST00000553099 ADCY5O95622 1261 aa10.46□□□□□ -0.74
RAB3IP-218ENST00000553099 RBM5P52756 815 aaKnown RBP eCLIP10.46□□□□□ -0.74
RAB3IP-218ENST00000553099 SF3B2Q13435 895 aaKnown RBP10.46□□□□□ -0.74
RAB3IP-218ENST00000553099 RILPL1Q5EBL4 403 aa10.46□□□□□ -0.74
RAB3IP-218ENST00000553099 DEFB132Q7Z7B7 95 aa10.46□□□□□ -0.74
RAB3IP-218ENST00000553099 KLHL34Q8N239 644 aa10.46□□□□□ -0.74
RAB3IP-218ENST00000553099 TEKT1Q969V4 418 aa10.46□□□□□ -0.74
RAB3IP-218ENST00000553099 BRMS1Q9HCU9 246 aa10.46□□□□□ -0.74
RAB3IP-218ENST00000553099 USP40Q9NVE5 1235 aa10.46□□□□□ -0.74
RAB3IP-218ENST00000553099 PCDHB6Q9Y5E3 794 aa10.46□□□□□ -0.74
RAB3IP-218ENST00000553099 SNED1Q8TER0 1413 aa10.46□□□□□ -0.74
RAB3IP-218ENST00000553099 PPP6R2O75170 966 aa10.45□□□□□ -0.74
RAB3IP-218ENST00000553099 ZNF202O95125 648 aa10.45□□□□□ -0.74
RAB3IP-218ENST00000553099 ZNF165P49910 485 aa10.45□□□□□ -0.74
RAB3IP-218ENST00000553099 TOB1P50616 345 aaPredicted RBP10.45□□□□□ -0.74
RAB3IP-218ENST00000553099 QSER1Q2KHR3 1735 aa10.45□□□□□ -0.74
RAB3IP-218ENST00000553099 SPECC1Q5M775 1068 aa10.45□□□□□ -0.74
RAB3IP-218ENST00000553099 STYK1Q6J9G0 422 aa10.45□□□□□ -0.74
RAB3IP-218ENST00000553099 RASGRP2Q7LDG7 609 aa10.45□□□□□ -0.74
RAB3IP-218ENST00000553099 CNKSR1Q969H4 720 aa10.45□□□□□ -0.74
RAB3IP-218ENST00000553099 PHF20Q9BVI0 1012 aa10.45□□□□□ -0.74
RAB3IP-218ENST00000553099 CBX8Q9HC52 389 aa10.45□□□□□ -0.74
RAB3IP-218ENST00000553099 DDX4Q9NQI0 724 aaKnown RBP10.45□□□□□ -0.74
RAB3IP-218ENST00000553099 SUGT1Q9Y2Z0 365 aa10.45□□□□□ -0.74
RAB3IP-218ENST00000553099 ECE2O60344 883 aa10.45□□□□□ -0.74
RAB3IP-218ENST00000553099 GOLGA8HP0CJ92 632 aa10.45□□□□□ -0.74
RAB3IP-218ENST00000553099 SCG2P13521 617 aa10.45□□□□□ -0.74
RAB3IP-218ENST00000553099 CMA1P23946 247 aa10.45□□□□□ -0.74
RAB3IP-218ENST00000553099 NLRP5P59047 1200 aa10.45□□□□□ -0.74
RAB3IP-218ENST00000553099 ZRSR1Q15695 479 aaKnown RBP10.45□□□□□ -0.74
RAB3IP-218ENST00000553099 AOC3Q16853 763 aa10.45□□□□□ -0.74
RAB3IP-218ENST00000553099 CCDC178Q5BJE1 867 aa10.45□□□□□ -0.74
RAB3IP-218ENST00000553099 PODNQ7Z5L7 613 aa10.45□□□□□ -0.74
RAB3IP-218ENST00000553099 GPKOWQ92917 476 aaPredicted RBP eCLIP10.45□□□□□ -0.74
RAB3IP-218ENST00000553099 TMEM47Q9BQJ4 181 aa10.45□□□□□ -0.74
RAB3IP-218ENST00000553099 VEGFAP15692 232 aaPredicted RBP10.44□□□□□ -0.74
RAB3IP-218ENST00000553099 MSNP26038 577 aaKnown RBP10.44□□□□□ -0.74
RAB3IP-218ENST00000553099 SYKP43405 635 aa10.44□□□□□ -0.74
RAB3IP-218ENST00000553099 STX1AQ16623 288 aa10.44□□□□□ -0.74
RAB3IP-218ENST00000553099 SHC4Q6S5L8 630 aa10.44□□□□□ -0.74
RAB3IP-218ENST00000553099 CACNB3P54284 484 aa10.44□□□□□ -0.74
RAB3IP-218ENST00000553099 EARS2Q5JPH6 523 aaKnown RBP10.44□□□□□ -0.74
RAB3IP-218ENST00000553099 C11orf57Q6ZUT1 292 aaPredicted RBP10.44□□□□□ -0.74
RAB3IP-218ENST00000553099 KRI1Q8N9T8 703 aaKnown RBP10.44□□□□□ -0.74
RAB3IP-218ENST00000553099 CEP95Q96GE4 821 aa10.44□□□□□ -0.74
RAB3IP-218ENST00000553099 BIN1O00499 593 aa10.43□□□□□ -0.74
RAB3IP-218ENST00000553099 C21orf2O43822 256 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms