RNA–Protein interactions for RNA: ENST00000552890.5

TRAFD1-208, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 1,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-208ENST00000552890 EPB41L4AQ9HCS5 686 aaPredicted RBP12.15□□□□□ -0.46
TRAFD1-208ENST00000552890 NYAP2Q9P242 653 aa12.15□□□□□ -0.46
TRAFD1-208ENST00000552890 DDX60LQ5H9U9 1706 aaKnown RBP12.14□□□□□ -0.47
TRAFD1-208ENST00000552890 FAM196BA6NMK8 535 aa12.14□□□□□ -0.47
TRAFD1-208ENST00000552890 TLR2O60603 784 aa12.14□□□□□ -0.47
TRAFD1-208ENST00000552890 GDF11O95390 407 aa12.14□□□□□ -0.47
TRAFD1-208ENST00000552890 TTLL1O95922 423 aa12.14□□□□□ -0.47
TRAFD1-208ENST00000552890 FGRP09769 529 aa12.14□□□□□ -0.47
TRAFD1-208ENST00000552890 HOXA7P31268 230 aaPredicted RBP12.14□□□□□ -0.47
TRAFD1-208ENST00000552890 SART3Q15020 963 aaKnown RBP12.14□□□□□ -0.47
TRAFD1-208ENST00000552890 SLFNL1Q499Z3 407 aa12.14□□□□□ -0.47
TRAFD1-208ENST00000552890 NEDD1Q8NHV4 660 aa12.14□□□□□ -0.47
TRAFD1-208ENST00000552890 SMCR8Q8TEV9 937 aaPredicted RBP12.14□□□□□ -0.47
TRAFD1-208ENST00000552890 STAG1Q8WVM7 1258 aa12.14□□□□□ -0.47
TRAFD1-208ENST00000552890 BRI3BPQ8WY22 251 aa12.14□□□□□ -0.47
TRAFD1-208ENST00000552890 ERO1AQ96HE7 468 aa12.14□□□□□ -0.47
TRAFD1-208ENST00000552890 TTC14Q96N46 770 aa12.14□□□□□ -0.47
TRAFD1-208ENST00000552890 TOMM22Q9NS69 142 aa12.14□□□□□ -0.47
TRAFD1-208ENST00000552890 HOXC10Q9NYD6 342 aa12.14□□□□□ -0.47
TRAFD1-208ENST00000552890 LAMB1P07942 1786 aa12.14□□□□□ -0.47
TRAFD1-208ENST00000552890 PLIN4Q96Q06 1357 aa12.14□□□□□ -0.47
TRAFD1-208ENST00000552890 OTOFQ9HC10 1997 aa12.14□□□□□ -0.47
TRAFD1-208ENST00000552890 USP17L15C9J2P7 530 aa12.13□□□□□ -0.47
TRAFD1-208ENST00000552890 BTBD19C9JJ37 291 aa12.13□□□□□ -0.47
TRAFD1-208ENST00000552890 USP17L13C9JLJ4 530 aa12.13□□□□□ -0.47
TRAFD1-208ENST00000552890 USP17L11C9JVI0 530 aa12.13□□□□□ -0.47
TRAFD1-208ENST00000552890 USP17L18D6R9N7 530 aa12.13□□□□□ -0.47
TRAFD1-208ENST00000552890 USP17L22D6RA61 530 aa12.13□□□□□ -0.47
TRAFD1-208ENST00000552890 USP17L17D6RBQ6 530 aa12.13□□□□□ -0.47
TRAFD1-208ENST00000552890 USP17L19D6RCP7 530 aa12.13□□□□□ -0.47
TRAFD1-208ENST00000552890 USP17L20D6RJB6 530 aa12.13□□□□□ -0.47
TRAFD1-208ENST00000552890 PDHXO00330 501 aa12.13□□□□□ -0.47
TRAFD1-208ENST00000552890 FKTNO75072 461 aa12.13□□□□□ -0.47
TRAFD1-208ENST00000552890 FDX1P10109 184 aa12.13□□□□□ -0.47
TRAFD1-208ENST00000552890 ZKSCAN1P17029 563 aaPredicted RBP12.13□□□□□ -0.47
TRAFD1-208ENST00000552890 RASA1P20936 1047 aa12.13□□□□□ -0.47
TRAFD1-208ENST00000552890 HOXD10P28358 340 aa12.13□□□□□ -0.47
TRAFD1-208ENST00000552890 GJA5P36382 358 aa12.13□□□□□ -0.47
TRAFD1-208ENST00000552890 HMGCS2P54868 508 aa12.13□□□□□ -0.47
TRAFD1-208ENST00000552890 PRMT2P55345 433 aa12.13□□□□□ -0.47
TRAFD1-208ENST00000552890 USP17L24Q0WX57 530 aa12.13□□□□□ -0.47
TRAFD1-208ENST00000552890 MTMR2Q13614 643 aa12.13□□□□□ -0.47
TRAFD1-208ENST00000552890 SLC4A8Q2Y0W8 1093 aa12.13□□□□□ -0.47
TRAFD1-208ENST00000552890 RCSD1Q6JBY9 416 aa12.13□□□□□ -0.47
TRAFD1-208ENST00000552890 CCDC129Q6ZRS4 1044 aa12.13□□□□□ -0.47
TRAFD1-208ENST00000552890 ZNF589Q86UQ0 364 aaPredicted RBP12.13□□□□□ -0.47
TRAFD1-208ENST00000552890 MB21D1Q8N884 522 aa12.13□□□□□ -0.47
TRAFD1-208ENST00000552890 MKL1Q969V6 931 aa12.13□□□□□ -0.47
TRAFD1-208ENST00000552890 DYNLL2Q96FJ2 89 aa12.13□□□□□ -0.47
TRAFD1-208ENST00000552890 MTA3Q9BTC8 594 aa12.13□□□□□ -0.47
TRAFD1-208ENST00000552890 TCP11L1Q9NUJ3 509 aa12.13□□□□□ -0.47
TRAFD1-208ENST00000552890 TMX2Q9Y320 296 aa12.13□□□□□ -0.47
TRAFD1-208ENST00000552890 MYPNQ86TC9 1320 aa12.12□□□□□ -0.47
TRAFD1-208ENST00000552890 MYH8P13535 1937 aa12.12□□□□□ -0.47
TRAFD1-208ENST00000552890 BAZ2AQ9UIF9 1905 aaKnown RBP12.12□□□□□ -0.47
TRAFD1-208ENST00000552890 RANBP6O60518 1105 aaKnown RBP12.12□□□□□ -0.47
TRAFD1-208ENST00000552890 CHGBP05060 677 aa12.12□□□□□ -0.47
TRAFD1-208ENST00000552890 CYP2D6P10635 497 aa12.12□□□□□ -0.47
TRAFD1-208ENST00000552890 CCNA1P78396 465 aa12.12□□□□□ -0.47
TRAFD1-208ENST00000552890 TFAP4Q01664 338 aa12.12□□□□□ -0.47
TRAFD1-208ENST00000552890 KRT32Q14532 448 aa12.12□□□□□ -0.47
TRAFD1-208ENST00000552890 SEPT2Q15019 361 aa12.12□□□□□ -0.47
TRAFD1-208ENST00000552890 RALYLQ86SE5 291 aaKnown RBP12.12□□□□□ -0.47
TRAFD1-208ENST00000552890 MAP4K1Q92918 833 aa12.12□□□□□ -0.47
TRAFD1-208ENST00000552890 ESYT1Q9BSJ8 1104 aa12.12□□□□□ -0.47
TRAFD1-208ENST00000552890 VCPKMTQ9H867 229 aa12.12□□□□□ -0.47
TRAFD1-208ENST00000552890 PNMA2Q9UL42 364 aa12.12□□□□□ -0.47
TRAFD1-208ENST00000552890 ERICH2A1L162 156 aa12.11□□□□□ -0.47
TRAFD1-208ENST00000552890 GPR25O00155 361 aa12.11□□□□□ -0.47
TRAFD1-208ENST00000552890 IGF2BP3O00425 579 aaKnown RBP eCLIP12.11□□□□□ -0.47
TRAFD1-208ENST00000552890 WDR46O15213 610 aaKnown RBP12.11□□□□□ -0.47
TRAFD1-208ENST00000552890 FOXN1O15353 648 aa12.11□□□□□ -0.47
TRAFD1-208ENST00000552890 AKR1B1P15121 316 aa12.11□□□□□ -0.47
TRAFD1-208ENST00000552890 MCCP23508 829 aa12.11□□□□□ -0.47
TRAFD1-208ENST00000552890 COPB2P35606 906 aa12.11□□□□□ -0.47
TRAFD1-208ENST00000552890 SP3Q02447 781 aa12.11□□□□□ -0.47
TRAFD1-208ENST00000552890 CCAR1Q8IX12 1150 aaKnown RBP12.11□□□□□ -0.47
TRAFD1-208ENST00000552890 CNKSR2Q8WXI2 1034 aa12.11□□□□□ -0.47
TRAFD1-208ENST00000552890 ANO2Q9NQ90 1003 aa12.11□□□□□ -0.47
TRAFD1-208ENST00000552890 MTMR4Q9NYA4 1195 aa12.11□□□□□ -0.47
TRAFD1-208ENST00000552890 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.11□□□□□ -0.47
TRAFD1-208ENST00000552890 CYP2D7A0A087X1C5 515 aa12.1□□□□□ -0.47
TRAFD1-208ENST00000552890 HMGB1P09429 215 aaKnown RBP12.1□□□□□ -0.47
TRAFD1-208ENST00000552890 HSPA8P11142 646 aaKnown RBP12.1□□□□□ -0.47
TRAFD1-208ENST00000552890 EEF2P13639 858 aaKnown RBP12.1□□□□□ -0.47
TRAFD1-208ENST00000552890 ATP2B2Q01814 1243 aa12.1□□□□□ -0.47
TRAFD1-208ENST00000552890 CRHR2Q13324 411 aa12.1□□□□□ -0.47
TRAFD1-208ENST00000552890 COG2Q14746 738 aa12.1□□□□□ -0.47
TRAFD1-208ENST00000552890 VPS53Q5VIR6 699 aa12.1□□□□□ -0.47
TRAFD1-208ENST00000552890 DGKHQ86XP1 1220 aa12.1□□□□□ -0.47
TRAFD1-208ENST00000552890 FAM43AQ8N2R8 423 aa12.1□□□□□ -0.47
TRAFD1-208ENST00000552890 TMTC2Q8N394 836 aa12.1□□□□□ -0.47
TRAFD1-208ENST00000552890 SLC44A5Q8NCS7 719 aa12.1□□□□□ -0.47
TRAFD1-208ENST00000552890 GMCL1P1Q8NEA9 526 aa12.1□□□□□ -0.47
TRAFD1-208ENST00000552890 ZIC5Q96T25 663 aa12.1□□□□□ -0.47
TRAFD1-208ENST00000552890 PTPN18Q99952 460 aa12.1□□□□□ -0.47
TRAFD1-208ENST00000552890 UBAC1Q9BSL1 405 aa12.1□□□□□ -0.47
TRAFD1-208ENST00000552890 ATAD5Q96QE3 1844 aa12.09□□□□□ -0.47
TRAFD1-208ENST00000552890 TOP1P11387 765 aaKnown RBP12.09□□□□□ -0.47
TRAFD1-208ENST00000552890 LBX1P52954 281 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms