RNA–Protein interactions for RNA: ENST00000552465.1

CACNB3-222, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-222ENST00000552465 ZNF512BQ96KM6 892 aaPredicted RBP20.69■□□□□ 0.9
CACNB3-222ENST00000552465 GUCD1Q96NT3 240 aa20.69■□□□□ 0.9
CACNB3-222ENST00000552465 PIH1D3Q9NQM4 214 aaKnown RBP20.69■□□□□ 0.9
CACNB3-222ENST00000552465 DDX20Q9UHI6 824 aaKnown RBP20.69■□□□□ 0.9
CACNB3-222ENST00000552465 ZAP70P43403 619 aa20.68■□□□□ 0.9
CACNB3-222ENST00000552465 ZYXQ15942 572 aaKnown RBP20.68■□□□□ 0.9
CACNB3-222ENST00000552465 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.68■□□□□ 0.9
CACNB3-222ENST00000552465 FEZ1Q99689 392 aa20.68■□□□□ 0.9
CACNB3-222ENST00000552465 IPO8O15397 1037 aaKnown RBP20.67■□□□□ 0.9
CACNB3-222ENST00000552465 MSCO60682 206 aa20.67■□□□□ 0.9
CACNB3-222ENST00000552465 HOXC6P09630 235 aa20.67■□□□□ 0.9
CACNB3-222ENST00000552465 TRIM27P14373 513 aa20.67■□□□□ 0.9
CACNB3-222ENST00000552465 CYP7A1P22680 504 aa20.67■□□□□ 0.9
CACNB3-222ENST00000552465 USP14P54578 494 aa20.67■□□□□ 0.9
CACNB3-222ENST00000552465 ATP2B2Q01814 1243 aa20.67■□□□□ 0.9
CACNB3-222ENST00000552465 WDR78Q5VTH9 848 aa20.67■□□□□ 0.9
CACNB3-222ENST00000552465 LPAR1Q92633 364 aa20.67■□□□□ 0.9
CACNB3-222ENST00000552465 KIAA1683Q9H0B3 1180 aa20.67■□□□□ 0.9
CACNB3-222ENST00000552465 TNNQ9UQP3 1299 aa20.67■□□□□ 0.9
CACNB3-222ENST00000552465 CNGA1P29973 690 aa20.66■□□□□ 0.9
CACNB3-222ENST00000552465 ATN1P54259 1190 aaPredicted RBP20.66■□□□□ 0.9
CACNB3-222ENST00000552465 POLA2Q14181 598 aa20.66■□□□□ 0.9
CACNB3-222ENST00000552465 LBX2Q6XYB7 198 aa20.66■□□□□ 0.9
CACNB3-222ENST00000552465 NPLOC4Q8TAT6 608 aa20.66■□□□□ 0.9
CACNB3-222ENST00000552465 BTBD7Q9P203 1132 aa20.66■□□□□ 0.9
CACNB3-222ENST00000552465 DNM1LO00429 736 aa20.65■□□□□ 0.9
CACNB3-222ENST00000552465 VCAM1P19320 739 aa20.65■□□□□ 0.9
CACNB3-222ENST00000552465 CYP2C19P33261 490 aa20.65■□□□□ 0.9
CACNB3-222ENST00000552465 GRB14Q14449 540 aa20.65■□□□□ 0.9
CACNB3-222ENST00000552465 RAB3GAP1Q15042 981 aa20.65■□□□□ 0.9
CACNB3-222ENST00000552465 TRPV1Q8NER1 839 aa20.65■□□□□ 0.9
CACNB3-222ENST00000552465 ACER1Q8TDN7 264 aa20.65■□□□□ 0.9
CACNB3-222ENST00000552465 FAM161BQ96MY7 647 aa20.65■□□□□ 0.9
CACNB3-222ENST00000552465 EHD4Q9H223 541 aa20.65■□□□□ 0.9
CACNB3-222ENST00000552465 SERPINB13Q9UIV8 391 aa20.65■□□□□ 0.9
CACNB3-222ENST00000552465 IVNS1ABPQ9Y6Y0 642 aa20.65■□□□□ 0.9
CACNB3-222ENST00000552465 CUL9Q8IWT3 2517 aa20.65■□□□□ 0.9
CACNB3-222ENST00000552465 A0A0C4DFX4 3053 aa20.64■□□□□ 0.9
CACNB3-222ENST00000552465 IGHA2P01877 340 aa20.64■□□□□ 0.89
CACNB3-222ENST00000552465 USP5P45974 858 aa20.64■□□□□ 0.89
CACNB3-222ENST00000552465 OS9Q13438 667 aaPredicted RBP20.64■□□□□ 0.89
CACNB3-222ENST00000552465 CERKLQ49MI3 558 aaPredicted RBP20.64■□□□□ 0.89
CACNB3-222ENST00000552465 MIGA1Q8NAN2 632 aa20.64■□□□□ 0.89
CACNB3-222ENST00000552465 PRKAG2Q9UGJ0 569 aa20.64■□□□□ 0.89
CACNB3-222ENST00000552465 RTP1P59025 263 aa20.63■□□□□ 0.89
CACNB3-222ENST00000552465 ABCB5Q2M3G0 1257 aa20.63■□□□□ 0.89
CACNB3-222ENST00000552465 TTC6Q86TZ1 520 aa20.63■□□□□ 0.89
CACNB3-222ENST00000552465 CERS3Q8IU89 383 aa20.63■□□□□ 0.89
CACNB3-222ENST00000552465 SSH3Q8TE77 659 aa20.63■□□□□ 0.89
CACNB3-222ENST00000552465 CLUAP1Q96AJ1 413 aa20.63■□□□□ 0.89
CACNB3-222ENST00000552465 MAST2Q6P0Q8 1798 aa20.63■□□□□ 0.89
CACNB3-222ENST00000552465 SPDYE16A6NNV3 312 aaPredicted RBP20.62■□□□□ 0.89
CACNB3-222ENST00000552465 SURF6O75683 361 aaKnown RBP20.62■□□□□ 0.89
CACNB3-222ENST00000552465 IDH1O75874 414 aaKnown RBP20.62■□□□□ 0.89
CACNB3-222ENST00000552465 CYBAP13498 195 aa20.62■□□□□ 0.89
CACNB3-222ENST00000552465 ATP8B2P98198 1209 aa20.62■□□□□ 0.89
CACNB3-222ENST00000552465 ZNF697Q5TEC3 545 aa20.62■□□□□ 0.89
CACNB3-222ENST00000552465 FRAT1Q92837 279 aaPredicted RBP20.62■□□□□ 0.89
CACNB3-222ENST00000552465 RPAP3Q9H6T3 665 aaPredicted RBP20.62■□□□□ 0.89
CACNB3-222ENST00000552465 CABP5Q9NP86 173 aa20.62■□□□□ 0.89
CACNB3-222ENST00000552465 DBNLQ9UJU6 430 aaKnown RBP20.62■□□□□ 0.89
CACNB3-222ENST00000552465 GJC2Q5T442 439 aaPredicted RBP20.61■□□□□ 0.89
CACNB3-222ENST00000552465 MAGEB6Q8N7X4 407 aa20.61■□□□□ 0.89
CACNB3-222ENST00000552465 ARRDC4Q8NCT1 418 aa20.61■□□□□ 0.89
CACNB3-222ENST00000552465 ATP11BQ9Y2G3 1177 aa20.61■□□□□ 0.89
CACNB3-222ENST00000552465 CDK5RAP2Q96SN8 1893 aa20.6■□□□□ 0.89
CACNB3-222ENST00000552465 FOCADQ5VW36 1801 aa20.6■□□□□ 0.89
CACNB3-222ENST00000552465 BCAR3O75815 825 aa20.6■□□□□ 0.89
CACNB3-222ENST00000552465 GUCY1A2P33402 732 aa20.6■□□□□ 0.89
CACNB3-222ENST00000552465 SHMT1P34896 483 aa20.6■□□□□ 0.89
CACNB3-222ENST00000552465 SHHQ15465 462 aa20.6■□□□□ 0.89
CACNB3-222ENST00000552465 OLFML2BQ68BL8 750 aa20.6■□□□□ 0.89
CACNB3-222ENST00000552465 SLC39A5Q6ZMH5 540 aa20.6■□□□□ 0.89
CACNB3-222ENST00000552465 DPP9Q86TI2 863 aa20.6■□□□□ 0.89
CACNB3-222ENST00000552465 CCDC8Q9H0W5 538 aaPredicted RBP20.6■□□□□ 0.89
CACNB3-222ENST00000552465 TLR7Q9NYK1 1049 aaKnown RBP20.6■□□□□ 0.89
CACNB3-222ENST00000552465 STRNO43815 780 aa20.59■□□□□ 0.89
CACNB3-222ENST00000552465 PLCD1P51178 756 aa20.59■□□□□ 0.89
CACNB3-222ENST00000552465 TMEM57Q8N5G2 664 aa20.59■□□□□ 0.89
CACNB3-222ENST00000552465 CDX2Q99626 313 aaPredicted RBP20.59■□□□□ 0.89
CACNB3-222ENST00000552465 MOV10L1Q9BXT6 1211 aaKnown RBP20.59■□□□□ 0.89
CACNB3-222ENST00000552465 NOP58Q9Y2X3 529 aaKnown RBP20.59■□□□□ 0.89
CACNB3-222ENST00000552465 ADORA2AP29274 412 aa20.58■□□□□ 0.89
CACNB3-222ENST00000552465 COG2Q14746 738 aa20.58■□□□□ 0.89
CACNB3-222ENST00000552465 EAF2Q96CJ1 260 aaPredicted RBP20.58■□□□□ 0.89
CACNB3-222ENST00000552465 SEMA6BQ9H3T3 888 aa20.58■□□□□ 0.89
CACNB3-222ENST00000552465 HOXC10Q9NYD6 342 aa20.58■□□□□ 0.89
CACNB3-222ENST00000552465 KBTBD13C9JR72 458 aa20.57■□□□□ 0.88
CACNB3-222ENST00000552465 MAP3K12Q12852 859 aa20.57■□□□□ 0.88
CACNB3-222ENST00000552465 SEPT2Q15019 361 aa20.57■□□□□ 0.88
CACNB3-222ENST00000552465 C9orf50Q5SZB4 431 aa20.57■□□□□ 0.88
CACNB3-222ENST00000552465 ANO1Q5XXA6 986 aa20.57■□□□□ 0.88
CACNB3-222ENST00000552465 TMED8Q6PL24 325 aaPredicted RBP20.57■□□□□ 0.88
CACNB3-222ENST00000552465 ANTXR1Q9H6X2 564 aa20.57■□□□□ 0.88
CACNB3-222ENST00000552465 FRMPD3Q5JV73 1810 aa20.57■□□□□ 0.88
CACNB3-222ENST00000552465 SEPT4O43236 478 aa20.56■□□□□ 0.88
CACNB3-222ENST00000552465 COBLO75128 1261 aa20.56■□□□□ 0.88
CACNB3-222ENST00000552465 GABPAQ06546 454 aa20.56■□□□□ 0.88
CACNB3-222ENST00000552465 SNX17Q15036 470 aa20.56■□□□□ 0.88
CACNB3-222ENST00000552465 SHCBP1Q8NEM2 672 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms