RNA–Protein interactions for RNA: ENST00000552237.1

USP44-207, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 3

Gene USP44, Length 463 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-207ENST00000552237 NFIXQ14938 502 aa6.99□□□□□ -1.29
USP44-207ENST00000552237 ZNF385BQ569K4 471 aa6.99□□□□□ -1.29
USP44-207ENST00000552237 CDH24Q86UP0 819 aa6.99□□□□□ -1.29
USP44-207ENST00000552237 LILRA2Q8N149 483 aa6.99□□□□□ -1.29
USP44-207ENST00000552237 PDZD8Q8NEN9 1154 aa6.99□□□□□ -1.29
USP44-207ENST00000552237 MCOLN1Q9GZU1 580 aa6.99□□□□□ -1.29
USP44-207ENST00000552237 C19orf44Q9H6X5 657 aa6.99□□□□□ -1.29
USP44-207ENST00000552237 SNCAIPQ9Y6H5 919 aa6.99□□□□□ -1.29
USP44-207ENST00000552237 LMNB1P20700 586 aa6.98□□□□□ -1.29
USP44-207ENST00000552237 GRK4P32298 578 aa6.98□□□□□ -1.29
USP44-207ENST00000552237 ETV3P41162 512 aa6.98□□□□□ -1.29
USP44-207ENST00000552237 PLCB3Q01970 1234 aa6.98□□□□□ -1.29
USP44-207ENST00000552237 ENOX2Q16206 610 aaKnown RBP6.98□□□□□ -1.29
USP44-207ENST00000552237 DBX2Q6ZNG2 339 aa6.98□□□□□ -1.29
USP44-207ENST00000552237 BIN2Q9UBW5 565 aaPredicted RBP6.98□□□□□ -1.29
USP44-207ENST00000552237 DUSP13Q9UII6 198 aa6.98□□□□□ -1.29
USP44-207ENST00000552237 A0A0G2JLL6 359 aaPredicted RBP6.97□□□□□ -1.29
USP44-207ENST00000552237 FITM1A5D6W6 292 aa6.97□□□□□ -1.29
USP44-207ENST00000552237 PDE6BP35913 854 aa6.97□□□□□ -1.29
USP44-207ENST00000552237 PTPN11Q06124 597 aaPredicted RBP6.97□□□□□ -1.29
USP44-207ENST00000552237 EGR3Q06889 387 aa6.97□□□□□ -1.29
USP44-207ENST00000552237 TXNDC2Q86VQ3 553 aa6.97□□□□□ -1.29
USP44-207ENST00000552237 CWC22Q9HCG8 908 aaKnown RBP6.97□□□□□ -1.29
USP44-207ENST00000552237 DCTN4Q9UJW0 460 aa6.97□□□□□ -1.29
USP44-207ENST00000552237 PEX10O60683 326 aa6.96□□□□□ -1.3
USP44-207ENST00000552237 LTKP29376 864 aa6.96□□□□□ -1.3
USP44-207ENST00000552237 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.96□□□□□ -1.3
USP44-207ENST00000552237 TMEM151BQ8IW70 566 aa6.96□□□□□ -1.3
USP44-207ENST00000552237 DHX38Q92620 1227 aaKnown RBP6.96□□□□□ -1.3
USP44-207ENST00000552237 DPH2Q9BQC3 489 aaPredicted RBP6.96□□□□□ -1.3
USP44-207ENST00000552237 GPATCH2Q9NW75 528 aa6.96□□□□□ -1.3
USP44-207ENST00000552237 WASH4PA8MWX3 477 aa6.95□□□□□ -1.3
USP44-207ENST00000552237 FBF1Q8TES7 1133 aa6.95□□□□□ -1.3
USP44-207ENST00000552237 INTS4Q96HW7 963 aaKnown RBP6.95□□□□□ -1.3
USP44-207ENST00000552237 KCNC2Q96PR1 638 aa6.95□□□□□ -1.3
USP44-207ENST00000552237 GPR160Q9UJ42 338 aa6.95□□□□□ -1.3
USP44-207ENST00000552237 KCTD3Q9Y597 815 aa6.95□□□□□ -1.3
USP44-207ENST00000552237 MYOCOSA0A1B0GUC4 107 aa6.94□□□□□ -1.3
USP44-207ENST00000552237 MAPK1P28482 360 aa6.94□□□□□ -1.3
USP44-207ENST00000552237 MAPK8P45983 427 aa6.94□□□□□ -1.3
USP44-207ENST00000552237 ERICH6BQ5W0A0 696 aa6.94□□□□□ -1.3
USP44-207ENST00000552237 GAL3ST3Q96A11 431 aa6.94□□□□□ -1.3
USP44-207ENST00000552237 TEX51A0A1B0GUA7 166 aa6.93□□□□□ -1.3
USP44-207ENST00000552237 GIPC1O14908 333 aa6.93□□□□□ -1.3
USP44-207ENST00000552237 SASH1O94885 1247 aa6.93□□□□□ -1.3
USP44-207ENST00000552237 PGRP06401 933 aa6.93□□□□□ -1.3
USP44-207ENST00000552237 ZGLP1P0C6A0 271 aa6.93□□□□□ -1.3
USP44-207ENST00000552237 CDK8P49336 464 aa6.93□□□□□ -1.3
USP44-207ENST00000552237 DSC3Q14574 896 aa6.93□□□□□ -1.3
USP44-207ENST00000552237 MARCH10Q8NA82 808 aaPredicted RBP6.93□□□□□ -1.3
USP44-207ENST00000552237 SGPP1Q9BX95 441 aa6.93□□□□□ -1.3
USP44-207ENST00000552237 OSBPL7Q9BZF2 842 aa6.93□□□□□ -1.3
USP44-207ENST00000552237 TTF2Q9UNY4 1162 aaKnown RBP6.93□□□□□ -1.3
USP44-207ENST00000552237 YBX2Q9Y2T7 364 aaKnown RBP6.93□□□□□ -1.3
USP44-207ENST00000552237 TREHO43280 583 aa6.92□□□□□ -1.3
USP44-207ENST00000552237 TIGD5Q53EQ6 642 aa6.92□□□□□ -1.3
USP44-207ENST00000552237 TTBK2Q6IQ55 1244 aa6.92□□□□□ -1.3
USP44-207ENST00000552237 SPPL2CQ8IUH8 684 aa6.92□□□□□ -1.3
USP44-207ENST00000552237 ANKRD24Q8TF21 1146 aa6.92□□□□□ -1.3
USP44-207ENST00000552237 Q96M66 194 aa6.92□□□□□ -1.3
USP44-207ENST00000552237 DUSP15Q9H1R2 295 aaPredicted RBP6.92□□□□□ -1.3
USP44-207ENST00000552237 RTEL1Q9NZ71 1219 aa6.92□□□□□ -1.3
USP44-207ENST00000552237 KCNH3Q9ULD8 1083 aa6.92□□□□□ -1.3
USP44-207ENST00000552237 SPG7Q9UQ90 795 aa6.92□□□□□ -1.3
USP44-207ENST00000552237 SOWAHDA6NJG2 315 aa6.91□□□□□ -1.3
USP44-207ENST00000552237 RBAK-RBAKDNI3L0D1 243 aa6.91□□□□□ -1.3
USP44-207ENST00000552237 TRIM13O60858 407 aa6.91□□□□□ -1.3
USP44-207ENST00000552237 CHRNEQ04844 493 aa6.91□□□□□ -1.3
USP44-207ENST00000552237 GAB4Q2WGN9 574 aa6.91□□□□□ -1.3
USP44-207ENST00000552237 SV2BQ7L1I2 683 aa6.91□□□□□ -1.3
USP44-207ENST00000552237 PRRT2Q7Z6L0 340 aaPredicted RBP6.91□□□□□ -1.3
USP44-207ENST00000552237 MRPL41Q8IXM3 137 aaKnown RBP6.91□□□□□ -1.3
USP44-207ENST00000552237 TMEM87BQ96K49 555 aa6.91□□□□□ -1.3
USP44-207ENST00000552237 ZNF552Q9H707 407 aaPredicted RBP6.91□□□□□ -1.3
USP44-207ENST00000552237 SP110Q9HB58 689 aa6.91□□□□□ -1.3
USP44-207ENST00000552237 FAM8A1Q9UBU6 413 aa6.91□□□□□ -1.3
USP44-207ENST00000552237 TJP2Q9UDY2 1190 aa6.91□□□□□ -1.3
USP44-207ENST00000552237 USP17L7P0C7H9 530 aa6.9□□□□□ -1.3
USP44-207ENST00000552237 ATP2B2Q01814 1243 aa6.9□□□□□ -1.3
USP44-207ENST00000552237 PDE4BQ07343 736 aa6.9□□□□□ -1.3
USP44-207ENST00000552237 DUSP4Q13115 394 aa6.9□□□□□ -1.3
USP44-207ENST00000552237 NR0B2Q15466 257 aa6.9□□□□□ -1.3
USP44-207ENST00000552237 SLC6A19Q695T7 634 aa6.9□□□□□ -1.3
USP44-207ENST00000552237 ALG1LQ6GMV1 187 aa6.9□□□□□ -1.3
USP44-207ENST00000552237 TSPYL5Q86VY4 417 aaPredicted RBP6.9□□□□□ -1.3
USP44-207ENST00000552237 PCDHA11Q9Y5I1 949 aa6.9□□□□□ -1.3
USP44-207ENST00000552237 PI3P19957 117 aa6.89□□□□□ -1.31
USP44-207ENST00000552237 SEPT6Q14141 434 aa6.89□□□□□ -1.31
USP44-207ENST00000552237 SSPNQ14714 243 aa6.89□□□□□ -1.31
USP44-207ENST00000552237 SNX17Q15036 470 aa6.89□□□□□ -1.31
USP44-207ENST00000552237 CXorf38Q8TB03 319 aa6.89□□□□□ -1.31
USP44-207ENST00000552237 PPP1R13LQ8WUF5 828 aa6.89□□□□□ -1.31
USP44-207ENST00000552237 BORCS6Q96GS4 357 aa6.89□□□□□ -1.31
USP44-207ENST00000552237 GPR62Q9BZJ7 368 aa6.89□□□□□ -1.31
USP44-207ENST00000552237 C12orf49Q9H741 205 aa6.89□□□□□ -1.31
USP44-207ENST00000552237 IRAK3Q9Y616 596 aa6.89□□□□□ -1.31
USP44-207ENST00000552237 TACC3Q9Y6A5 838 aa6.89□□□□□ -1.31
USP44-207ENST00000552237 OR14I1A6ND48 311 aa6.88□□□□□ -1.31
USP44-207ENST00000552237 CELA3BP08861 270 aa6.88□□□□□ -1.31
USP44-207ENST00000552237 ANKS4BQ8N8V4 417 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms