RNA–Protein interactions for RNA: ENST00000552000.2

HOXB3-213, Transcript of homeobox B3, humanhuman

TSL 3

Gene HOXB3, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-213ENST00000552000 IFIT5Q13325 482 aaKnown RBP6.83□□□□□ -1.32
HOXB3-213ENST00000552000 MOGSQ13724 837 aa6.83□□□□□ -1.32
HOXB3-213ENST00000552000 WDR43Q15061 677 aaKnown RBP eCLIP6.83□□□□□ -1.324e-9■■□□□ 12.8
HOXB3-213ENST00000552000 LRIT3Q3SXY7 679 aa6.83□□□□□ -1.32
HOXB3-213ENST00000552000 DCAF15Q66K64 600 aa6.83□□□□□ -1.32
HOXB3-213ENST00000552000 SMYD5Q6GMV2 418 aa6.83□□□□□ -1.32
HOXB3-213ENST00000552000 NECAB2Q7Z6G3 386 aa6.83□□□□□ -1.32
HOXB3-213ENST00000552000 TDRD7Q8NHU6 1098 aaKnown RBP6.83□□□□□ -1.32
HOXB3-213ENST00000552000 ZNF594Q96JF6 807 aaPredicted RBP6.83□□□□□ -1.32
HOXB3-213ENST00000552000 PARK7Q99497 189 aaKnown RBP6.83□□□□□ -1.32
HOXB3-213ENST00000552000 STK31Q9BXU1 1019 aa6.83□□□□□ -1.32
HOXB3-213ENST00000552000 ZNF341Q9BYN7 854 aa6.83□□□□□ -1.32
HOXB3-213ENST00000552000 TMOD2Q9NZR1 351 aa6.83□□□□□ -1.32
HOXB3-213ENST00000552000 IQSEC3Q9UPP2 1182 aaPredicted RBP6.83□□□□□ -1.32
HOXB3-213ENST00000552000 KCNH4Q9UQ05 1017 aa6.83□□□□□ -1.32
HOXB3-213ENST00000552000 MUC3AQ02505 3323 aa6.83□□□□□ -1.32
HOXB3-213ENST00000552000 PTPRFP10586 1907 aa6.82□□□□□ -1.32
HOXB3-213ENST00000552000 RALBP1Q15311 655 aa6.82□□□□□ -1.32
HOXB3-213ENST00000552000 TAF7LQ5H9L4 462 aa6.82□□□□□ -1.32
HOXB3-213ENST00000552000 FAM83AQ86UY5 434 aa6.82□□□□□ -1.32
HOXB3-213ENST00000552000 TDHQ8IZJ6 230 aa6.82□□□□□ -1.32
HOXB3-213ENST00000552000 HOOK2Q96ED9 719 aa6.82□□□□□ -1.32
HOXB3-213ENST00000552000 FAM84BQ96KN1 310 aaPredicted RBP6.82□□□□□ -1.32
HOXB3-213ENST00000552000 CHMP4AQ9BY43 222 aa6.82□□□□□ -1.32
HOXB3-213ENST00000552000 UBE2OQ9C0C9 1292 aaKnown RBP6.82□□□□□ -1.32
HOXB3-213ENST00000552000 MYH16Q9H6N6 1097 aa6.82□□□□□ -1.32
HOXB3-213ENST00000552000 PAK6Q9NQU5 681 aaPredicted RBP6.82□□□□□ -1.32
HOXB3-213ENST00000552000 CNNM1Q9NRU3 951 aa6.82□□□□□ -1.32
HOXB3-213ENST00000552000 ADAMTS8Q9UP79 889 aa6.82□□□□□ -1.32
HOXB3-213ENST00000552000 RPTORQ8N122 1335 aa6.81□□□□□ -1.32
HOXB3-213ENST00000552000 CDH23Q9H251 3354 aa6.81□□□□□ -1.32
HOXB3-213ENST00000552000 TNPO2O14787 897 aaKnown RBP6.81□□□□□ -1.32
HOXB3-213ENST00000552000 KDM4AO75164 1064 aa6.81□□□□□ -1.32
HOXB3-213ENST00000552000 CAPN2P17655 700 aa6.81□□□□□ -1.32
HOXB3-213ENST00000552000 FOXO4P98177 505 aa6.81□□□□□ -1.32
HOXB3-213ENST00000552000 CALD1Q05682 793 aaKnown RBP6.81□□□□□ -1.32
HOXB3-213ENST00000552000 UBE4AQ14139 1066 aa6.81□□□□□ -1.32
HOXB3-213ENST00000552000 FKBP1CQ5VVH2 108 aa6.81□□□□□ -1.32
HOXB3-213ENST00000552000 GPAT2Q6NUI2 795 aa6.81□□□□□ -1.32
HOXB3-213ENST00000552000 LMBR1LQ6UX01 489 aa6.81□□□□□ -1.32
HOXB3-213ENST00000552000 LDHAL6AQ6ZMR3 332 aa6.81□□□□□ -1.32
HOXB3-213ENST00000552000 KCTD17Q8N5Z5 321 aa6.81□□□□□ -1.32
HOXB3-213ENST00000552000 DNAAF4Q8WXU2 420 aa6.81□□□□□ -1.32
HOXB3-213ENST00000552000 TEKT1Q969V4 418 aa6.81□□□□□ -1.32
HOXB3-213ENST00000552000 ZFP42Q96MM3 310 aa6.81□□□□□ -1.32
HOXB3-213ENST00000552000 GUCD1Q96NT3 240 aa6.81□□□□□ -1.32
HOXB3-213ENST00000552000 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.81□□□□□ -1.32
HOXB3-213ENST00000552000 BRWD1Q9NSI6 2320 aa6.81□□□□□ -1.32
HOXB3-213ENST00000552000 CXCL11O14625 94 aa6.8□□□□□ -1.32
HOXB3-213ENST00000552000 APAF1O14727 1248 aa6.8□□□□□ -1.32
HOXB3-213ENST00000552000 FRAT2O75474 233 aaPredicted RBP6.8□□□□□ -1.32
HOXB3-213ENST00000552000 JUNDP17535 347 aa6.8□□□□□ -1.32
HOXB3-213ENST00000552000 HDLBPQ00341 1268 aaKnown RBP6.8□□□□□ -1.32
HOXB3-213ENST00000552000 FLIIQ13045 1269 aa6.8□□□□□ -1.32
HOXB3-213ENST00000552000 FKBP5Q13451 457 aaPredicted RBP6.8□□□□□ -1.32
HOXB3-213ENST00000552000 IRF5Q13568 498 aa6.8□□□□□ -1.32
HOXB3-213ENST00000552000 CCDC57Q2TAC2 916 aa6.8□□□□□ -1.32
HOXB3-213ENST00000552000 DDX60LQ5H9U9 1706 aaKnown RBP6.8□□□□□ -1.32
HOXB3-213ENST00000552000 EPHA10Q5JZY3 1008 aa6.8□□□□□ -1.32
HOXB3-213ENST00000552000 APOBEC3HQ6NTF7 200 aaKnown RBP6.8□□□□□ -1.32
HOXB3-213ENST00000552000 GADL1Q6ZQY3 521 aa6.8□□□□□ -1.32
HOXB3-213ENST00000552000 VPS37DQ86XT2 251 aa6.8□□□□□ -1.32
HOXB3-213ENST00000552000 LINS1Q8NG48 757 aa6.8□□□□□ -1.32
HOXB3-213ENST00000552000 ZDHHC15Q96MV8 337 aa6.8□□□□□ -1.32
HOXB3-213ENST00000552000 FAM161BQ96MY7 647 aa6.8□□□□□ -1.32
HOXB3-213ENST00000552000 PRDM6Q9NQX0 595 aa6.8□□□□□ -1.32
HOXB3-213ENST00000552000 RPAP1Q9BWH6 1393 aaPredicted RBP6.8□□□□□ -1.32
HOXB3-213ENST00000552000 SIAH2O43255 324 aa6.79□□□□□ -1.32
HOXB3-213ENST00000552000 USP46P62068 366 aa6.79□□□□□ -1.32
HOXB3-213ENST00000552000 KCNMA1Q12791 1236 aa6.79□□□□□ -1.32
HOXB3-213ENST00000552000 TCP10Q12799 353 aa6.79□□□□□ -1.32
HOXB3-213ENST00000552000 NOL9Q5SY16 702 aaKnown RBP6.79□□□□□ -1.32
HOXB3-213ENST00000552000 FBXO33Q7Z6M2 555 aa6.79□□□□□ -1.32
HOXB3-213ENST00000552000 SMCR8Q8TEV9 937 aaPredicted RBP6.79□□□□□ -1.32
HOXB3-213ENST00000552000 TBC1D22AQ8WUA7 517 aa6.79□□□□□ -1.32
HOXB3-213ENST00000552000 TSR2Q969E8 191 aaKnown RBP6.79□□□□□ -1.32
HOXB3-213ENST00000552000 COA7Q96BR5 231 aa6.79□□□□□ -1.32
HOXB3-213ENST00000552000 PUS3Q9BZE2 481 aaKnown RBP6.79□□□□□ -1.32
HOXB3-213ENST00000552000 C11orf49Q9H6J7 331 aa6.79□□□□□ -1.32
HOXB3-213ENST00000552000 ZNF112Q9UJU3 913 aa6.79□□□□□ -1.32
HOXB3-213ENST00000552000 MYH13Q9UKX3 1938 aa6.79□□□□□ -1.32
HOXB3-213ENST00000552000 MYBBP1AQ9BQG0 1328 aaKnown RBP6.78□□□□□ -1.32
HOXB3-213ENST00000552000 A0A0G2JLL6 359 aaPredicted RBP6.78□□□□□ -1.32
HOXB3-213ENST00000552000 HMGCRP04035 888 aa6.78□□□□□ -1.32
HOXB3-213ENST00000552000 CD46P15529 392 aa6.78□□□□□ -1.32
HOXB3-213ENST00000552000 MDM2Q00987 491 aaPredicted RBP6.78□□□□□ -1.32
HOXB3-213ENST00000552000 NFIAQ12857 509 aa6.78□□□□□ -1.32
HOXB3-213ENST00000552000 TWISTNBQ3B726 338 aaPredicted RBP6.78□□□□□ -1.32
HOXB3-213ENST00000552000 FASTKD5Q7L8L6 764 aaKnown RBP6.78□□□□□ -1.32
HOXB3-213ENST00000552000 PRRT2Q7Z6L0 340 aaPredicted RBP6.78□□□□□ -1.32
HOXB3-213ENST00000552000 ANKRD13CQ8N6S4 541 aa6.78□□□□□ -1.32
HOXB3-213ENST00000552000 FAM151AQ8WW52 585 aa6.78□□□□□ -1.32
HOXB3-213ENST00000552000 PHOX2BQ99453 314 aa6.78□□□□□ -1.32
HOXB3-213ENST00000552000 NUDT12Q9BQG2 462 aa6.78□□□□□ -1.32
HOXB3-213ENST00000552000 MRIQ9BWK5 157 aa6.78□□□□□ -1.32
HOXB3-213ENST00000552000 HMX1Q9NP08 348 aaPredicted RBP6.78□□□□□ -1.32
HOXB3-213ENST00000552000 ZHX2Q9Y6X8 837 aa6.78□□□□□ -1.32
HOXB3-213ENST00000552000 MAST3O60307 1309 aa6.77□□□□□ -1.32
HOXB3-213ENST00000552000 F6X3S4 739 aa6.77□□□□□ -1.33
HOXB3-213ENST00000552000 FAM109BQ6ICB4 259 aaPredicted RBP6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms