RNA–Protein interactions for RNA: ENST00000551567.1

TROAP-216, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 3

Gene TROAP, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-216ENST00000551567 GJD2Q9UKL4 321 aa27.88■■■□□ 2.05
TROAP-216ENST00000551567 MPHOSPH10O00566 681 aaKnown RBP27.87■■■□□ 2.05
TROAP-216ENST00000551567 GUCY1A2P33402 732 aa27.87■■■□□ 2.05
TROAP-216ENST00000551567 USP14P54578 494 aa27.87■■■□□ 2.05
TROAP-216ENST00000551567 SEPT2Q15019 361 aa27.87■■■□□ 2.05
TROAP-216ENST00000551567 SLC44A5Q8NCS7 719 aa27.87■■■□□ 2.05
TROAP-216ENST00000551567 KIAA1683Q9H0B3 1180 aa27.87■■■□□ 2.05
TROAP-216ENST00000551567 SGPL1O95470 568 aa27.86■■■□□ 2.05
TROAP-216ENST00000551567 ERVK-9P63128 1117 aa27.86■■■□□ 2.05
TROAP-216ENST00000551567 ERVK-24P63145 666 aa27.86■■■□□ 2.05
TROAP-216ENST00000551567 DEFB118Q96PH6 123 aa27.86■■■□□ 2.05
TROAP-216ENST00000551567 USP17L15C9J2P7 530 aa27.85■■■□□ 2.05
TROAP-216ENST00000551567 USP17L13C9JLJ4 530 aa27.85■■■□□ 2.05
TROAP-216ENST00000551567 USP17L11C9JVI0 530 aa27.85■■■□□ 2.05
TROAP-216ENST00000551567 USP17L18D6R9N7 530 aa27.85■■■□□ 2.05
TROAP-216ENST00000551567 USP17L22D6RA61 530 aa27.85■■■□□ 2.05
TROAP-216ENST00000551567 USP17L17D6RBQ6 530 aa27.85■■■□□ 2.05
TROAP-216ENST00000551567 USP17L19D6RCP7 530 aa27.85■■■□□ 2.05
TROAP-216ENST00000551567 USP17L20D6RJB6 530 aa27.85■■■□□ 2.05
TROAP-216ENST00000551567 HMGCRP04035 888 aa27.85■■■□□ 2.05
TROAP-216ENST00000551567 VCAM1P19320 739 aa27.85■■■□□ 2.05
TROAP-216ENST00000551567 USP17L24Q0WX57 530 aa27.85■■■□□ 2.05
TROAP-216ENST00000551567 POTEEQ6S8J3 1075 aa27.85■■■□□ 2.05
TROAP-216ENST00000551567 GTF3C2Q8WUA4 911 aaPredicted RBP27.85■■■□□ 2.05
TROAP-216ENST00000551567 DYNLL2Q96FJ2 89 aa27.85■■■□□ 2.05
TROAP-216ENST00000551567 FARP2O94887 1054 aaPredicted RBP27.84■■■□□ 2.05
TROAP-216ENST00000551567 Q3C1V9 767 aa27.84■■■□□ 2.05
TROAP-216ENST00000551567 UBE2Q1Q7Z7E8 422 aa27.84■■■□□ 2.05
TROAP-216ENST00000551567 CCAR1Q8IX12 1150 aaKnown RBP27.84■■■□□ 2.05
TROAP-216ENST00000551567 PORCNQ9H237 461 aa27.84■■■□□ 2.05
TROAP-216ENST00000551567 PAK6Q9NQU5 681 aaPredicted RBP27.84■■■□□ 2.05
TROAP-216ENST00000551567 ATP8A2Q9NTI2 1148 aa27.84■■■□□ 2.05
TROAP-216ENST00000551567 ECHDC1Q9NTX5 307 aa27.84■■■□□ 2.05
TROAP-216ENST00000551567 CYP2B6P20813 491 aa27.83■■■□□ 2.05
TROAP-216ENST00000551567 MAPK4P31152 587 aa27.83■■■□□ 2.05
TROAP-216ENST00000551567 TRIM32Q13049 653 aa27.83■■■□□ 2.05
TROAP-216ENST00000551567 UBE3CQ15386 1083 aa27.83■■■□□ 2.05
TROAP-216ENST00000551567 DCTPP1Q9H773 170 aa27.83■■■□□ 2.05
TROAP-216ENST00000551567 CYP2D7A0A087X1C5 515 aa27.82■■■□□ 2.04
TROAP-216ENST00000551567 TFRCP02786 760 aaKnown RBP27.82■■■□□ 2.04
TROAP-216ENST00000551567 TSHZ3Q63HK5 1081 aa27.82■■■□□ 2.04
TROAP-216ENST00000551567 CATSPERGQ6ZRH7 1159 aa27.82■■■□□ 2.04
TROAP-216ENST00000551567 TRIB2Q92519 343 aa27.82■■■□□ 2.04
TROAP-216ENST00000551567 NUDT12Q9BQG2 462 aa27.82■■■□□ 2.04
TROAP-216ENST00000551567 XRN2Q9H0D6 950 aaKnown RBP eCLIP27.82■■■□□ 2.04
TROAP-216ENST00000551567 H0YGN5 161 aa27.81■■■□□ 2.04
TROAP-216ENST00000551567 SMIM22K7EJ46 135 aa27.81■■■□□ 2.04
TROAP-216ENST00000551567 ZSCAN25Q6NSZ9 544 aa27.81■■■□□ 2.04
TROAP-216ENST00000551567 SOCS4Q8WXH5 440 aa27.81■■■□□ 2.04
TROAP-216ENST00000551567 DPF3Q92784 378 aa27.81■■■□□ 2.04
TROAP-216ENST00000551567 PUS7LQ9H0K6 701 aaKnown RBP27.81■■■□□ 2.04
TROAP-216ENST00000551567 RPAP3Q9H6T3 665 aaPredicted RBP27.81■■■□□ 2.04
TROAP-216ENST00000551567 SWAP70Q9UH65 585 aa27.81■■■□□ 2.04
TROAP-216ENST00000551567 RABGAP1Q9Y3P9 1069 aa27.81■■■□□ 2.04
TROAP-216ENST00000551567 A0A1W2PRG0 241 aa27.8■■■□□ 2.04
TROAP-216ENST00000551567 CNMDO75829 334 aa27.8■■■□□ 2.04
TROAP-216ENST00000551567 HABP4Q5JVS0 413 aaKnown RBP27.8■■■□□ 2.04
TROAP-216ENST00000551567 GPR142Q7Z601 462 aa27.8■■■□□ 2.04
TROAP-216ENST00000551567 GPATCH3Q96I76 525 aa27.8■■■□□ 2.04
TROAP-216ENST00000551567 CWC22Q9HCG8 908 aaKnown RBP27.8■■■□□ 2.04
TROAP-216ENST00000551567 SLC4A4Q9Y6R1 1079 aa27.8■■■□□ 2.04
TROAP-216ENST00000551567 TMEM179Q6ZVK1 233 aa27.79■■■□□ 2.04
TROAP-216ENST00000551567 CLEC10AQ8IUN9 316 aa27.79■■■□□ 2.04
TROAP-216ENST00000551567 AMOTL1Q8IY63 956 aa27.79■■■□□ 2.04
TROAP-216ENST00000551567 DDRGK1Q96HY6 314 aa27.79■■■□□ 2.04
TROAP-216ENST00000551567 HTATIP2Q9BUP3 242 aa27.79■■■□□ 2.04
TROAP-216ENST00000551567 USP17L12C9JPN9 530 aa27.78■■■□□ 2.04
TROAP-216ENST00000551567 USP17L21D6R901 530 aa27.78■■■□□ 2.04
TROAP-216ENST00000551567 AKR1B1P15121 316 aa27.78■■■□□ 2.04
TROAP-216ENST00000551567 C12orf60Q5U649 245 aa27.78■■■□□ 2.04
TROAP-216ENST00000551567 PLEKHH3Q7Z736 793 aa27.78■■■□□ 2.04
TROAP-216ENST00000551567 RPTORQ8N122 1335 aa27.77■■■□□ 2.04
TROAP-216ENST00000551567 SPDYE16A6NNV3 312 aaPredicted RBP27.77■■■□□ 2.04
TROAP-216ENST00000551567 WDR78Q5VTH9 848 aa27.77■■■□□ 2.04
TROAP-216ENST00000551567 CRISPLD2Q9H0B8 497 aa27.77■■■□□ 2.04
TROAP-216ENST00000551567 HMX1Q9NP08 348 aaPredicted RBP27.77■■■□□ 2.04
TROAP-216ENST00000551567 CDK8P49336 464 aa27.76■■■□□ 2.03
TROAP-216ENST00000551567 CCNA1P78396 465 aa27.76■■■□□ 2.03
TROAP-216ENST00000551567 TANGO6Q9C0B7 1094 aa27.76■■■□□ 2.03
TROAP-216ENST00000551567 BTBD7Q9P203 1132 aa27.76■■■□□ 2.03
TROAP-216ENST00000551567 PCDHB15Q9Y5E8 787 aa27.76■■■□□ 2.03
TROAP-216ENST00000551567 A0A0G2JMZ2 1700 aa27.75■■■□□ 2.03
TROAP-216ENST00000551567 RLFQ13129 1914 aa27.75■■■□□ 2.03
TROAP-216ENST00000551567 XRCC5P13010 732 aaKnown RBP27.75■■■□□ 2.03
TROAP-216ENST00000551567 PRKAR2AP13861 404 aaKnown RBP27.75■■■□□ 2.03
TROAP-216ENST00000551567 ZKSCAN1P17029 563 aaPredicted RBP27.75■■■□□ 2.03
TROAP-216ENST00000551567 RGS2P41220 211 aa27.75■■■□□ 2.03
TROAP-216ENST00000551567 ICA1Q05084 483 aa27.75■■■□□ 2.03
TROAP-216ENST00000551567 MORN1Q5T089 497 aa27.75■■■□□ 2.03
TROAP-216ENST00000551567 LBX2Q6XYB7 198 aa27.75■■■□□ 2.03
TROAP-216ENST00000551567 KBTBD3Q8NAB2 608 aa27.75■■■□□ 2.03
TROAP-216ENST00000551567 USP6NLQ92738 828 aa27.75■■■□□ 2.03
TROAP-216ENST00000551567 RRP1P56182 461 aaKnown RBP27.74■■■□□ 2.03
TROAP-216ENST00000551567 CCL14Q16627 93 aa27.74■■■□□ 2.03
TROAP-216ENST00000551567 KIAA1755Q5JYT7 1200 aa27.74■■■□□ 2.03
TROAP-216ENST00000551567 CTR9Q6PD62 1173 aa27.74■■■□□ 2.03
TROAP-216ENST00000551567 C16orf86Q6ZW13 317 aa27.74■■■□□ 2.03
TROAP-216ENST00000551567 APBA2Q99767 749 aa27.74■■■□□ 2.03
TROAP-216ENST00000551567 COLQQ9Y215 455 aaPredicted RBP27.74■■■□□ 2.03
TROAP-216ENST00000551567 ALPK3Q96L96 1907 aa27.74■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 141.5 ms