RNA–Protein interactions for RNA: ENST00000551418.5

PRPF40B-215, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-215ENST00000551418 RHPN1Q8TCX5 695 aa21.78■■□□□ 1.08
PRPF40B-215ENST00000551418 C12orf42Q96LP6 360 aa21.78■■□□□ 1.08
PRPF40B-215ENST00000551418 FEZ1Q99689 392 aa21.78■■□□□ 1.08
PRPF40B-215ENST00000551418 BCL11AQ9H165 835 aa21.78■■□□□ 1.08
PRPF40B-215ENST00000551418 EHD4Q9H223 541 aa21.78■■□□□ 1.08
PRPF40B-215ENST00000551418 ABCB5Q2M3G0 1257 aa21.77■■□□□ 1.08
PRPF40B-215ENST00000551418 SLFNL1Q499Z3 407 aa21.77■■□□□ 1.08
PRPF40B-215ENST00000551418 CATSPERGQ6ZRH7 1159 aa21.77■■□□□ 1.08
PRPF40B-215ENST00000551418 TTC6Q86TZ1 520 aa21.77■■□□□ 1.08
PRPF40B-215ENST00000551418 SOCS4Q8WXH5 440 aa21.77■■□□□ 1.08
PRPF40B-215ENST00000551418 EDC3Q96F86 508 aaKnown RBP21.77■■□□□ 1.08
PRPF40B-215ENST00000551418 GDF15Q99988 308 aa21.77■■□□□ 1.08
PRPF40B-215ENST00000551418 C11orf49Q9H6J7 331 aa21.77■■□□□ 1.08
PRPF40B-215ENST00000551418 BTBD7Q9P203 1132 aa21.77■■□□□ 1.08
PRPF40B-215ENST00000551418 PFASO15067 1338 aa21.77■■□□□ 1.07
PRPF40B-215ENST00000551418 USP17L15C9J2P7 530 aa21.76■■□□□ 1.07
PRPF40B-215ENST00000551418 USP17L13C9JLJ4 530 aa21.76■■□□□ 1.07
PRPF40B-215ENST00000551418 USP17L11C9JVI0 530 aa21.76■■□□□ 1.07
PRPF40B-215ENST00000551418 USP17L18D6R9N7 530 aa21.76■■□□□ 1.07
PRPF40B-215ENST00000551418 USP17L22D6RA61 530 aa21.76■■□□□ 1.07
PRPF40B-215ENST00000551418 USP17L17D6RBQ6 530 aa21.76■■□□□ 1.07
PRPF40B-215ENST00000551418 USP17L19D6RCP7 530 aa21.76■■□□□ 1.07
PRPF40B-215ENST00000551418 USP17L20D6RJB6 530 aa21.76■■□□□ 1.07
PRPF40B-215ENST00000551418 PDE6AP16499 860 aa21.76■■□□□ 1.07
PRPF40B-215ENST00000551418 ZKSCAN1P17029 563 aaPredicted RBP21.76■■□□□ 1.07
PRPF40B-215ENST00000551418 VCAM1P19320 739 aa21.76■■□□□ 1.07
PRPF40B-215ENST00000551418 USP17L24Q0WX57 530 aa21.76■■□□□ 1.07
PRPF40B-215ENST00000551418 PDE3AQ14432 1141 aa21.76■■□□□ 1.07
PRPF40B-215ENST00000551418 LHX8Q68G74 356 aa21.76■■□□□ 1.07
PRPF40B-215ENST00000551418 SIRT2Q8IXJ6 389 aa21.76■■□□□ 1.07
PRPF40B-215ENST00000551418 KIAA1683Q9H0B3 1180 aa21.76■■□□□ 1.07
PRPF40B-215ENST00000551418 FLRT1Q9NZU1 646 aa21.76■■□□□ 1.07
PRPF40B-215ENST00000551418 MAGEB6P1A0A0J9YX57 407 aa21.75■■□□□ 1.07
PRPF40B-215ENST00000551418 CYP2D6P10635 497 aa21.75■■□□□ 1.07
PRPF40B-215ENST00000551418 RGS2P41220 211 aa21.75■■□□□ 1.07
PRPF40B-215ENST00000551418 GABPAQ06546 454 aa21.75■■□□□ 1.07
PRPF40B-215ENST00000551418 SEPT2Q15019 361 aa21.75■■□□□ 1.07
PRPF40B-215ENST00000551418 SLC9C2Q5TAH2 1124 aa21.75■■□□□ 1.07
PRPF40B-215ENST00000551418 ERC1Q8IUD2 1116 aa21.75■■□□□ 1.07
PRPF40B-215ENST00000551418 CCAR1Q8IX12 1150 aaKnown RBP21.75■■□□□ 1.07
PRPF40B-215ENST00000551418 RABGAP1Q9Y3P9 1069 aa21.75■■□□□ 1.07
PRPF40B-215ENST00000551418 NAV1Q8NEY1 1877 aa21.75■■□□□ 1.07
PRPF40B-215ENST00000551418 A0A1W2PRG0 241 aa21.74■■□□□ 1.07
PRPF40B-215ENST00000551418 SMIM22K7EJ46 135 aa21.74■■□□□ 1.07
PRPF40B-215ENST00000551418 POLR3DP05423 398 aaPredicted RBP21.74■■□□□ 1.07
PRPF40B-215ENST00000551418 MAP2K5Q13163 448 aa21.74■■□□□ 1.07
PRPF40B-215ENST00000551418 ZNF532Q9HCE3 1301 aa21.74■■□□□ 1.07
PRPF40B-215ENST00000551418 TCRBV5S4A2TA0A5A2 114 aa21.73■■□□□ 1.07
PRPF40B-215ENST00000551418 GOLIM4O00461 696 aa21.73■■□□□ 1.07
PRPF40B-215ENST00000551418 CHGBP05060 677 aa21.73■■□□□ 1.07
PRPF40B-215ENST00000551418 KIAA1755Q5JYT7 1200 aa21.73■■□□□ 1.07
PRPF40B-215ENST00000551418 WDR78Q5VTH9 848 aa21.73■■□□□ 1.07
PRPF40B-215ENST00000551418 DIEXFQ68CQ4 756 aaKnown RBP21.73■■□□□ 1.07
PRPF40B-215ENST00000551418 CERS3Q8IU89 383 aa21.73■■□□□ 1.07
PRPF40B-215ENST00000551418 LCORLQ8N3X6 602 aa21.73■■□□□ 1.07
PRPF40B-215ENST00000551418 SLC44A5Q8NCS7 719 aa21.73■■□□□ 1.07
PRPF40B-215ENST00000551418 GTF3C2Q8WUA4 911 aaPredicted RBP21.73■■□□□ 1.07
PRPF40B-215ENST00000551418 SDR42E1Q8WUS8 393 aa21.73■■□□□ 1.07
PRPF40B-215ENST00000551418 DNAJC2Q99543 621 aaKnown RBP21.73■■□□□ 1.07
PRPF40B-215ENST00000551418 APBA2Q99767 749 aa21.73■■□□□ 1.07
PRPF40B-215ENST00000551418 RPAP3Q9H6T3 665 aaPredicted RBP21.73■■□□□ 1.07
PRPF40B-215ENST00000551418 LAMA3Q16787 3333 aa21.72■■□□□ 1.07
PRPF40B-215ENST00000551418 A0A1W2PPC1 479 aa21.72■■□□□ 1.07
PRPF40B-215ENST00000551418 SPDYE16A6NNV3 312 aaPredicted RBP21.72■■□□□ 1.07
PRPF40B-215ENST00000551418 COL6A1P12109 1028 aa21.72■■□□□ 1.07
PRPF40B-215ENST00000551418 NPLOC4Q8TAT6 608 aa21.72■■□□□ 1.07
PRPF40B-215ENST00000551418 CABP5Q9NP86 173 aa21.72■■□□□ 1.07
PRPF40B-215ENST00000551418 MCM9Q9NXL9 1143 aa21.72■■□□□ 1.07
PRPF40B-215ENST00000551418 RLFQ13129 1914 aa21.71■■□□□ 1.07
PRPF40B-215ENST00000551418 PRKAB2O43741 272 aa21.71■■□□□ 1.07
PRPF40B-215ENST00000551418 PTPREP23469 700 aa21.71■■□□□ 1.07
PRPF40B-215ENST00000551418 MAGEA10P43363 369 aaPredicted RBP21.71■■□□□ 1.07
PRPF40B-215ENST00000551418 USP14P54578 494 aa21.71■■□□□ 1.07
PRPF40B-215ENST00000551418 TRMT44Q8IYL2 757 aaKnown RBP21.71■■□□□ 1.07
PRPF40B-215ENST00000551418 DYNLL2Q96FJ2 89 aa21.71■■□□□ 1.07
PRPF40B-215ENST00000551418 CWC22Q9HCG8 908 aaKnown RBP21.71■■□□□ 1.07
PRPF40B-215ENST00000551418 COG6Q9Y2V7 657 aa21.71■■□□□ 1.07
PRPF40B-215ENST00000551418 FRMPD3Q5JV73 1810 aa21.71■■□□□ 1.07
PRPF40B-215ENST00000551418 BMP8BP34820 402 aa21.7■■□□□ 1.06
PRPF40B-215ENST00000551418 TTF1Q15361 905 aaPredicted RBP21.7■■□□□ 1.06
PRPF40B-215ENST00000551418 LRRC26Q2I0M4 334 aa21.7■■□□□ 1.06
PRPF40B-215ENST00000551418 CLEC10AQ8IUN9 316 aa21.7■■□□□ 1.06
PRPF40B-215ENST00000551418 CRNKL1Q9BZJ0 848 aaKnown RBP21.7■■□□□ 1.06
PRPF40B-215ENST00000551418 ARMT1Q9H993 441 aa21.7■■□□□ 1.06
PRPF40B-215ENST00000551418 DCP1AQ9NPI6 582 aaPredicted RBP21.7■■□□□ 1.06
PRPF40B-215ENST00000551418 BAZ2AQ9UIF9 1905 aaKnown RBP21.69■■□□□ 1.06
PRPF40B-215ENST00000551418 SLC15A5A6NIM6 579 aa21.69■■□□□ 1.06
PRPF40B-215ENST00000551418 MPHOSPH10O00566 681 aaKnown RBP21.69■■□□□ 1.06
PRPF40B-215ENST00000551418 HSP90AB4PQ58FF6 505 aa21.69■■□□□ 1.06
PRPF40B-215ENST00000551418 LBX2Q6XYB7 198 aa21.69■■□□□ 1.06
PRPF40B-215ENST00000551418 SIAH1Q8IUQ4 282 aa21.69■■□□□ 1.06
PRPF40B-215ENST00000551418 CLASRPQ8N2M8 674 aaKnown RBP21.69■■□□□ 1.06
PRPF40B-215ENST00000551418 TRPV1Q8NER1 839 aa21.69■■□□□ 1.06
PRPF40B-215ENST00000551418 KIF1BPQ96EK5 621 aa21.69■■□□□ 1.06
PRPF40B-215ENST00000551418 ZBED9Q6R2W3 1325 aa21.69■■□□□ 1.06
PRPF40B-215ENST00000551418 CYP2D7A0A087X1C5 515 aa21.68■■□□□ 1.06
PRPF40B-215ENST00000551418 CYP2C19P33261 490 aa21.68■■□□□ 1.06
PRPF40B-215ENST00000551418 CCNA1P78396 465 aa21.68■■□□□ 1.06
PRPF40B-215ENST00000551418 TMED8Q6PL24 325 aaPredicted RBP21.68■■□□□ 1.06
PRPF40B-215ENST00000551418 BOLA2Q9H3K6 86 aa21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms