RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 DIP2AQ14689 1571 aa7.46□□□□□ -1.22
SCAF11-214ENST00000550893 ENC1O14682 589 aa7.45□□□□□ -1.22
SCAF11-214ENST00000550893 F13BP05160 661 aa7.45□□□□□ -1.22
SCAF11-214ENST00000550893 SLFN14P0C7P3 912 aa7.45□□□□□ -1.22
SCAF11-214ENST00000550893 COL19A1Q14993 1142 aa7.45□□□□□ -1.22
SCAF11-214ENST00000550893 RNF19AQ9NV58 838 aa7.45□□□□□ -1.22
SCAF11-214ENST00000550893 CRIM1Q9NZV1 1036 aa7.45□□□□□ -1.22
SCAF11-214ENST00000550893 FAM8A1Q9UBU6 413 aa7.45□□□□□ -1.22
SCAF11-214ENST00000550893 PRKAG2Q9UGJ0 569 aa7.45□□□□□ -1.22
SCAF11-214ENST00000550893 PCDHGC5Q9Y5F6 944 aa7.45□□□□□ -1.22
SCAF11-214ENST00000550893 PTPRUQ92729 1446 aa7.44□□□□□ -1.22
SCAF11-214ENST00000550893 COBLO75128 1261 aa7.44□□□□□ -1.22
SCAF11-214ENST00000550893 PRPF40AO75400 957 aaKnown RBP7.44□□□□□ -1.22
SCAF11-214ENST00000550893 PAGE1O75459 146 aa7.44□□□□□ -1.22
SCAF11-214ENST00000550893 USP17L7P0C7H9 530 aa7.44□□□□□ -1.22
SCAF11-214ENST00000550893 ADMP35318 185 aa7.44□□□□□ -1.22
SCAF11-214ENST00000550893 ID3Q02535 119 aa7.44□□□□□ -1.22
SCAF11-214ENST00000550893 MAP1SQ66K74 1059 aaPredicted RBP7.44□□□□□ -1.22
SCAF11-214ENST00000550893 TBC1D32Q96NH3 1257 aa7.44□□□□□ -1.22
SCAF11-214ENST00000550893 CEP44Q9C0F1 390 aa7.44□□□□□ -1.22
SCAF11-214ENST00000550893 PCMTD2Q9NV79 361 aa7.44□□□□□ -1.22
SCAF11-214ENST00000550893 NKTRP30414 1462 aaKnown RBP7.43□□□□□ -1.22
SCAF11-214ENST00000550893 BMP6P22004 513 aa7.43□□□□□ -1.22
SCAF11-214ENST00000550893 GNA15P30679 374 aa7.43□□□□□ -1.22
SCAF11-214ENST00000550893 ZNF252P-AS1Q0IIN9 211 aa7.43□□□□□ -1.22
SCAF11-214ENST00000550893 MAP7Q14244 749 aa7.43□□□□□ -1.22
SCAF11-214ENST00000550893 EAPPQ56P03 285 aaPredicted RBP7.43□□□□□ -1.22
SCAF11-214ENST00000550893 MPRIPQ6WCQ1 1025 aa7.43□□□□□ -1.22
SCAF11-214ENST00000550893 DNAJC14Q6Y2X3 702 aaPredicted RBP7.43□□□□□ -1.22
SCAF11-214ENST00000550893 ZAR1Q86SH2 424 aa7.43□□□□□ -1.22
SCAF11-214ENST00000550893 GRIN3AQ8TCU5 1115 aa7.43□□□□□ -1.22
SCAF11-214ENST00000550893 ANKRD24Q8TF21 1146 aa7.43□□□□□ -1.22
SCAF11-214ENST00000550893 GATA6Q92908 595 aa7.43□□□□□ -1.22
SCAF11-214ENST00000550893 FRMD6Q96NE9 622 aa7.43□□□□□ -1.22
SCAF11-214ENST00000550893 FANCD2OSQ96PS1 177 aa7.43□□□□□ -1.22
SCAF11-214ENST00000550893 EMILIN2Q9BXX0 1053 aa7.43□□□□□ -1.22
SCAF11-214ENST00000550893 CBX8Q9HC52 389 aa7.43□□□□□ -1.22
SCAF11-214ENST00000550893 DISC1Q9NRI5 854 aa7.43□□□□□ -1.22
SCAF11-214ENST00000550893 ATG3Q9NT62 314 aa7.43□□□□□ -1.22
SCAF11-214ENST00000550893 DAGLAQ9Y4D2 1042 aa7.43□□□□□ -1.22
SCAF11-214ENST00000550893 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.43□□□□□ -1.22
SCAF11-214ENST00000550893 KANK1Q14678 1352 aa7.43□□□□□ -1.22
SCAF11-214ENST00000550893 RIMS2Q9UQ26 1411 aa7.43□□□□□ -1.22
SCAF11-214ENST00000550893 ROBO1Q9Y6N7 1651 aa7.42□□□□□ -1.22
SCAF11-214ENST00000550893 DYNC1LI2O43237 492 aaPredicted RBP7.42□□□□□ -1.22
SCAF11-214ENST00000550893 HOXA10P31260 410 aaPredicted RBP7.42□□□□□ -1.22
SCAF11-214ENST00000550893 GRIK1P39086 918 aa7.42□□□□□ -1.22
SCAF11-214ENST00000550893 SEZ6L2Q6UXD5 910 aa7.42□□□□□ -1.22
SCAF11-214ENST00000550893 NPAS4Q8IUM7 802 aa7.42□□□□□ -1.22
SCAF11-214ENST00000550893 GIMAP7Q8NHV1 300 aa7.42□□□□□ -1.22
SCAF11-214ENST00000550893 GPBAR1Q8TDU6 330 aa7.42□□□□□ -1.22
SCAF11-214ENST00000550893 DUSP9Q99956 384 aaKnown RBP7.42□□□□□ -1.22
SCAF11-214ENST00000550893 OSBPL1AQ9BXW6 950 aa7.42□□□□□ -1.22
SCAF11-214ENST00000550893 LGR6Q9HBX8 967 aa7.42□□□□□ -1.22
SCAF11-214ENST00000550893 PLEKHG1Q9ULL1 1385 aa7.42□□□□□ -1.22
SCAF11-214ENST00000550893 KNDC1Q76NI1 1749 aa7.41□□□□□ -1.22
SCAF11-214ENST00000550893 KIAA1324LA8MWY0 1029 aaPredicted RBP7.41□□□□□ -1.22
SCAF11-214ENST00000550893 CELA3AP09093 270 aa7.41□□□□□ -1.22
SCAF11-214ENST00000550893 EIF4BP23588 611 aaKnown RBP7.41□□□□□ -1.22
SCAF11-214ENST00000550893 HNRNPUQ00839 825 aaKnown RBP eCLIP7.41□□□□□ -1.22
SCAF11-214ENST00000550893 RASIP1Q5U651 963 aa7.41□□□□□ -1.22
SCAF11-214ENST00000550893 INTS5Q6P9B9 1019 aaKnown RBP7.41□□□□□ -1.22
SCAF11-214ENST00000550893 KRTAP4-12Q9BQ66 201 aa7.41□□□□□ -1.22
SCAF11-214ENST00000550893 GZF1Q9H116 711 aaPredicted RBP7.41□□□□□ -1.22
SCAF11-214ENST00000550893 ATXN3LQ9H3M9 355 aa7.41□□□□□ -1.22
SCAF11-214ENST00000550893 C1GALT1Q9NS00 363 aa7.41□□□□□ -1.22
SCAF11-214ENST00000550893 CACNA2D2Q9NY47 1150 aa7.41□□□□□ -1.22
SCAF11-214ENST00000550893 PIM2Q9P1W9 311 aa7.41□□□□□ -1.22
SCAF11-214ENST00000550893 NUP155O75694 1391 aa7.41□□□□□ -1.22
SCAF11-214ENST00000550893 SPATA31E1Q6ZUB1 1445 aa7.41□□□□□ -1.22
SCAF11-214ENST00000550893 PRAG1Q86YV5 1406 aa7.41□□□□□ -1.22
SCAF11-214ENST00000550893 MED1Q15648 1581 aaPredicted RBP7.41□□□□□ -1.22
SCAF11-214ENST00000550893 COL16A1Q07092 1604 aaPredicted RBP7.41□□□□□ -1.22
SCAF11-214ENST00000550893 FAM170BA6NMN3 283 aa7.4□□□□□ -1.22
SCAF11-214ENST00000550893 TTLL4Q14679 1199 aa7.4□□□□□ -1.22
SCAF11-214ENST00000550893 ZC3H12AQ5D1E8 599 aaKnown RBP7.4□□□□□ -1.22
SCAF11-214ENST00000550893 PIDD1Q9HB75 910 aa7.4□□□□□ -1.22
SCAF11-214ENST00000550893 LEMD3Q9Y2U8 911 aa7.4□□□□□ -1.22
SCAF11-214ENST00000550893 SAMM50Q9Y512 469 aa7.4□□□□□ -1.22
SCAF11-214ENST00000550893 AK5Q9Y6K8 562 aa7.4□□□□□ -1.22
SCAF11-214ENST00000550893 LAMC1P11047 1609 aa7.4□□□□□ -1.22
SCAF11-214ENST00000550893 NHSL1Q5SYE7 1610 aa7.4□□□□□ -1.22
SCAF11-214ENST00000550893 SPINK2P20155 84 aa7.39□□□□□ -1.23
SCAF11-214ENST00000550893 FGD1P98174 961 aa7.39□□□□□ -1.23
SCAF11-214ENST00000550893 THEMISQ8N1K5 641 aaPredicted RBP7.39□□□□□ -1.23
SCAF11-214ENST00000550893 ACSBG1Q96GR2 724 aa7.39□□□□□ -1.23
SCAF11-214ENST00000550893 METTL22Q9BUU2 404 aaPredicted RBP7.39□□□□□ -1.23
SCAF11-214ENST00000550893 TTF2Q9UNY4 1162 aaKnown RBP7.39□□□□□ -1.23
SCAF11-214ENST00000550893 NRXN1Q9ULB1 1477 aa7.38□□□□□ -1.23
SCAF11-214ENST00000550893 RNGTTO60942 597 aaKnown RBP7.38□□□□□ -1.23
SCAF11-214ENST00000550893 TRIM37O94972 964 aa7.38□□□□□ -1.23
SCAF11-214ENST00000550893 HCLS1P14317 486 aaPredicted RBP7.38□□□□□ -1.23
SCAF11-214ENST00000550893 ITGAEP38570 1179 aa7.38□□□□□ -1.23
SCAF11-214ENST00000550893 CPSF6Q16630 551 aaKnown RBP eCLIP7.38□□□□□ -1.23
SCAF11-214ENST00000550893 PCNX4Q63HM2 1172 aa7.38□□□□□ -1.23
SCAF11-214ENST00000550893 LLGL2Q6P1M3 1020 aa7.38□□□□□ -1.23
SCAF11-214ENST00000550893 SV2BQ7L1I2 683 aa7.38□□□□□ -1.23
SCAF11-214ENST00000550893 ANKLE2Q86XL3 938 aa7.38□□□□□ -1.23
SCAF11-214ENST00000550893 DTX1Q86Y01 620 aa7.38□□□□□ -1.23
SCAF11-214ENST00000550893 SMYD4Q8IYR2 804 aaPredicted RBP7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms