RNA–Protein interactions for RNA: ENST00000550863.1

CPNE8-207, Transcript of copine 8, humanhuman

TSL 4

Gene CPNE8, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-207ENST00000550863 UBXN2AP68543 259 aa13.9□□□□□ -0.18
CPNE8-207ENST00000550863 GABPAQ06546 454 aa13.9□□□□□ -0.18
CPNE8-207ENST00000550863 IRF5Q13568 498 aa13.9□□□□□ -0.18
CPNE8-207ENST00000550863 SEPT2Q15019 361 aa13.9□□□□□ -0.18
CPNE8-207ENST00000550863 ABCB5Q2M3G0 1257 aa13.9□□□□□ -0.18
CPNE8-207ENST00000550863 CERKLQ49MI3 558 aaPredicted RBP13.9□□□□□ -0.18
CPNE8-207ENST00000550863 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.9□□□□□ -0.18
CPNE8-207ENST00000550863 COA7Q96BR5 231 aa13.9□□□□□ -0.18
CPNE8-207ENST00000550863 DCP1AQ9NPI6 582 aaPredicted RBP13.9□□□□□ -0.18
CPNE8-207ENST00000550863 GJD2Q9UKL4 321 aa13.9□□□□□ -0.18
CPNE8-207ENST00000550863 ZNF236Q9UL36 1845 aa13.9□□□□□ -0.18
CPNE8-207ENST00000550863 A0A1W2PRG0 241 aa13.89□□□□□ -0.19
CPNE8-207ENST00000550863 FARP2O94887 1054 aaPredicted RBP13.89□□□□□ -0.19
CPNE8-207ENST00000550863 POLR3DP05423 398 aaPredicted RBP13.89□□□□□ -0.19
CPNE8-207ENST00000550863 CYP2B6P20813 491 aa13.89□□□□□ -0.19
CPNE8-207ENST00000550863 HOXA7P31268 230 aaPredicted RBP13.89□□□□□ -0.19
CPNE8-207ENST00000550863 GCLCP48506 637 aaPredicted RBP13.89□□□□□ -0.19
CPNE8-207ENST00000550863 PABPC4Q13310 644 aaKnown RBP eCLIP13.89□□□□□ -0.19
CPNE8-207ENST00000550863 TTF1Q15361 905 aaPredicted RBP13.89□□□□□ -0.19
CPNE8-207ENST00000550863 CCL14Q16627 93 aa13.89□□□□□ -0.19
CPNE8-207ENST00000550863 HABP4Q5JVS0 413 aaKnown RBP13.89□□□□□ -0.19
CPNE8-207ENST00000550863 KIAA1755Q5JYT7 1200 aa13.89□□□□□ -0.19
CPNE8-207ENST00000550863 CRNKL1Q9BZJ0 848 aaKnown RBP13.89□□□□□ -0.19
CPNE8-207ENST00000550863 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.89□□□□□ -0.19
CPNE8-207ENST00000550863 COLQQ9Y215 455 aaPredicted RBP13.89□□□□□ -0.19
CPNE8-207ENST00000550863 C19orf81C9J6K1 198 aa13.88□□□□□ -0.19
CPNE8-207ENST00000550863 MPHOSPH10O00566 681 aaKnown RBP13.88□□□□□ -0.19
CPNE8-207ENST00000550863 RAB11FIP3O75154 756 aa13.88□□□□□ -0.19
CPNE8-207ENST00000550863 ATP5JP18859 108 aa13.88□□□□□ -0.19
CPNE8-207ENST00000550863 ERVK-9P63128 1117 aa13.88□□□□□ -0.19
CPNE8-207ENST00000550863 ERVK-24P63145 666 aa13.88□□□□□ -0.19
CPNE8-207ENST00000550863 USP17L2Q6R6M4 530 aa13.88□□□□□ -0.19
CPNE8-207ENST00000550863 TTC6Q86TZ1 520 aa13.88□□□□□ -0.19
CPNE8-207ENST00000550863 PXYLP1Q8TE99 480 aa13.88□□□□□ -0.19
CPNE8-207ENST00000550863 HAUS7Q99871 368 aa13.88□□□□□ -0.19
CPNE8-207ENST00000550863 LRRCC1Q9C099 1032 aa13.88□□□□□ -0.19
CPNE8-207ENST00000550863 PAK6Q9NQU5 681 aaPredicted RBP13.88□□□□□ -0.19
CPNE8-207ENST00000550863 SGPL1O95470 568 aa13.87□□□□□ -0.19
CPNE8-207ENST00000550863 HMGCRP04035 888 aa13.87□□□□□ -0.19
CPNE8-207ENST00000550863 AKR1B1P15121 316 aa13.87□□□□□ -0.19
CPNE8-207ENST00000550863 OTUD7AQ8TE49 926 aaPredicted RBP13.87□□□□□ -0.19
CPNE8-207ENST00000550863 C12orf42Q96LP6 360 aa13.87□□□□□ -0.19
CPNE8-207ENST00000550863 PUS7LQ9H0K6 701 aaKnown RBP13.87□□□□□ -0.19
CPNE8-207ENST00000550863 RPAP3Q9H6T3 665 aaPredicted RBP13.87□□□□□ -0.19
CPNE8-207ENST00000550863 BTBD7Q9P203 1132 aa13.87□□□□□ -0.19
CPNE8-207ENST00000550863 LAMA3Q16787 3333 aa13.87□□□□□ -0.19
CPNE8-207ENST00000550863 SPDYE16A6NNV3 312 aaPredicted RBP13.86□□□□□ -0.19
CPNE8-207ENST00000550863 IGSF3O75054 1194 aa13.86□□□□□ -0.19
CPNE8-207ENST00000550863 PDE3AQ14432 1141 aa13.86□□□□□ -0.19
CPNE8-207ENST00000550863 CHRDL2Q6WN34 429 aa13.86□□□□□ -0.19
CPNE8-207ENST00000550863 GPR142Q7Z601 462 aa13.86□□□□□ -0.19
CPNE8-207ENST00000550863 STK11IPQ8N1F8 1099 aa13.86□□□□□ -0.19
CPNE8-207ENST00000550863 GPRC5AQ8NFJ5 357 aa13.86□□□□□ -0.19
CPNE8-207ENST00000550863 DPF3Q92784 378 aa13.86□□□□□ -0.19
CPNE8-207ENST00000550863 KIAA1683Q9H0B3 1180 aa13.86□□□□□ -0.19
CPNE8-207ENST00000550863 CERS3Q8IU89 383 aa13.85□□□□□ -0.19
CPNE8-207ENST00000550863 SPICE1Q8N0Z3 855 aa13.85□□□□□ -0.19
CPNE8-207ENST00000550863 NKX2-3Q8TAU0 364 aa13.85□□□□□ -0.19
CPNE8-207ENST00000550863 GINM1Q9NU53 330 aa13.85□□□□□ -0.19
CPNE8-207ENST00000550863 FLRT1Q9NZU1 646 aa13.85□□□□□ -0.19
CPNE8-207ENST00000550863 PCDHB15Q9Y5E8 787 aa13.85□□□□□ -0.19
CPNE8-207ENST00000550863 MCM3APO60318 1980 aa13.84□□□□□ -0.19
CPNE8-207ENST00000550863 DNAH12Q6ZR08 3092 aa13.84□□□□□ -0.19
CPNE8-207ENST00000550863 USP17L15C9J2P7 530 aa13.84□□□□□ -0.19
CPNE8-207ENST00000550863 USP17L13C9JLJ4 530 aa13.84□□□□□ -0.19
CPNE8-207ENST00000550863 USP17L11C9JVI0 530 aa13.84□□□□□ -0.19
CPNE8-207ENST00000550863 USP17L18D6R9N7 530 aa13.84□□□□□ -0.19
CPNE8-207ENST00000550863 USP17L22D6RA61 530 aa13.84□□□□□ -0.19
CPNE8-207ENST00000550863 USP17L17D6RBQ6 530 aa13.84□□□□□ -0.19
CPNE8-207ENST00000550863 USP17L19D6RCP7 530 aa13.84□□□□□ -0.19
CPNE8-207ENST00000550863 USP17L20D6RJB6 530 aa13.84□□□□□ -0.19
CPNE8-207ENST00000550863 TFRCP02786 760 aaKnown RBP13.84□□□□□ -0.19
CPNE8-207ENST00000550863 PRKAR2AP13861 404 aaKnown RBP13.84□□□□□ -0.19
CPNE8-207ENST00000550863 CCND3P30281 292 aaPredicted RBP13.84□□□□□ -0.19
CPNE8-207ENST00000550863 MNX1P50219 401 aaPredicted RBP13.84□□□□□ -0.19
CPNE8-207ENST00000550863 FXR1P51114 621 aaKnown RBP eCLIP13.84□□□□□ -0.19
CPNE8-207ENST00000550863 USP17L24Q0WX57 530 aa13.84□□□□□ -0.19
CPNE8-207ENST00000550863 WDR78Q5VTH9 848 aa13.84□□□□□ -0.19
CPNE8-207ENST00000550863 CATSPERGQ6ZRH7 1159 aa13.84□□□□□ -0.19
CPNE8-207ENST00000550863 USP6NLQ92738 828 aa13.84□□□□□ -0.19
CPNE8-207ENST00000550863 PAWRQ96IZ0 340 aaKnown RBP13.84□□□□□ -0.19
CPNE8-207ENST00000550863 CRISPLD2Q9H0B8 497 aa13.84□□□□□ -0.19
CPNE8-207ENST00000550863 CABP5Q9NP86 173 aa13.84□□□□□ -0.19
CPNE8-207ENST00000550863 SLC4A4Q9Y6R1 1079 aa13.84□□□□□ -0.19
CPNE8-207ENST00000550863 USP17L12C9JPN9 530 aa13.83□□□□□ -0.2
CPNE8-207ENST00000550863 USP17L21D6R901 530 aa13.83□□□□□ -0.2
CPNE8-207ENST00000550863 MORN1Q5T089 497 aa13.83□□□□□ -0.2
CPNE8-207ENST00000550863 SAMD1Q6SPF0 538 aaPredicted RBP13.83□□□□□ -0.2
CPNE8-207ENST00000550863 SIAH1Q8IUQ4 282 aa13.83□□□□□ -0.2
CPNE8-207ENST00000550863 TANGO6Q9C0B7 1094 aa13.83□□□□□ -0.2
CPNE8-207ENST00000550863 EPB41L4AQ9HCS5 686 aaPredicted RBP13.83□□□□□ -0.2
CPNE8-207ENST00000550863 M0R2C6 588 aa13.82□□□□□ -0.2
CPNE8-207ENST00000550863 ZKSCAN1P17029 563 aaPredicted RBP13.82□□□□□ -0.2
CPNE8-207ENST00000550863 CDK8P49336 464 aa13.82□□□□□ -0.2
CPNE8-207ENST00000550863 ICA1Q05084 483 aa13.82□□□□□ -0.2
CPNE8-207ENST00000550863 CACNB2Q08289 660 aaPredicted RBP13.82□□□□□ -0.2
CPNE8-207ENST00000550863 MAP3K21Q5TCX8 1036 aa13.82□□□□□ -0.2
CPNE8-207ENST00000550863 C12orf60Q5U649 245 aa13.82□□□□□ -0.2
CPNE8-207ENST00000550863 CTR9Q6PD62 1173 aa13.82□□□□□ -0.2
CPNE8-207ENST00000550863 PLEKHH3Q7Z736 793 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms