RNA–Protein interactions for RNA: ENST00000550442.5

LETMD1-223, Transcript of LETM1 domain containing 1, human

TSL 4

Gene LETMD1, Length 469 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LETMD1-223	ENST00000550442	ZNF165	P49910	485 aa		13.63	□□□□□ -0.23
LETMD1-223	ENST00000550442	FXR1	P51114	621 aa	Known RBP eCLIP	13.63	□□□□□ -0.23
LETMD1-223	ENST00000550442	PPARA	Q07869	468 aa		13.63	□□□□□ -0.23
LETMD1-223	ENST00000550442	GNL2	Q13823	731 aa	Known RBP	13.63	□□□□□ -0.23
LETMD1-223	ENST00000550442	NTRK3	Q16288	839 aa		13.63	□□□□□ -0.23
LETMD1-223	ENST00000550442	KANK3	Q6NY19	840 aa		13.63	□□□□□ -0.23
LETMD1-223	ENST00000550442	TBC1D10C	Q8IV04	446 aa		13.63	□□□□□ -0.23
LETMD1-223	ENST00000550442	SLF2	Q8IX21	1173 aa		13.63	□□□□□ -0.23
LETMD1-223	ENST00000550442	AMOTL1	Q8IY63	956 aa		13.63	□□□□□ -0.23
LETMD1-223	ENST00000550442	ZNF579	Q8NAF0	562 aa	Known RBP	13.63	□□□□□ -0.23
LETMD1-223	ENST00000550442	HELB	Q8NG08	1087 aa	Predicted RBP	13.63	□□□□□ -0.23
LETMD1-223	ENST00000550442	CHAMP1	Q96JM3	812 aa		13.63	□□□□□ -0.23
LETMD1-223	ENST00000550442	FAM84B	Q96KN1	310 aa	Predicted RBP	13.63	□□□□□ -0.23
LETMD1-223	ENST00000550442	PYM1	Q9BRP8	204 aa	Known RBP	13.63	□□□□□ -0.23
LETMD1-223	ENST00000550442	NBPF3	Q9H094	633 aa		13.63	□□□□□ -0.23
LETMD1-223	ENST00000550442	NCOA5	Q9HCD5	579 aa	Known RBP	13.63	□□□□□ -0.23
LETMD1-223	ENST00000550442	RAI14	Q9P0K7	980 aa		13.63	□□□□□ -0.23
LETMD1-223	ENST00000550442	ARPP21	Q9UBL0	812 aa	Predicted RBP	13.63	□□□□□ -0.23
LETMD1-223	ENST00000550442	PGAP2	Q9UHJ9	254 aa		13.63	□□□□□ -0.23
LETMD1-223	ENST00000550442	SNED1	Q8TER0	1413 aa		13.63	□□□□□ -0.23
LETMD1-223	ENST00000550442	FAM155A	B1AL88	458 aa	Predicted RBP	13.62	□□□□□ -0.23
LETMD1-223	ENST00000550442		B4E1Z4	1266 aa		13.62	□□□□□ -0.23
LETMD1-223	ENST00000550442	NR1I2	O75469	434 aa		13.62	□□□□□ -0.23
LETMD1-223	ENST00000550442	DDAH1	O94760	285 aa		13.62	□□□□□ -0.23
LETMD1-223	ENST00000550442	AKAP17A	Q02040	695 aa	Known RBP	13.62	□□□□□ -0.23
LETMD1-223	ENST00000550442	PDE4B	Q07343	736 aa		13.62	□□□□□ -0.23
LETMD1-223	ENST00000550442	SNW1	Q13573	536 aa	Known RBP	13.62	□□□□□ -0.23
LETMD1-223	ENST00000550442	RTN1	Q16799	776 aa		13.62	□□□□□ -0.23
LETMD1-223	ENST00000550442	CYB5R4	Q7L1T6	521 aa		13.62	□□□□□ -0.23
LETMD1-223	ENST00000550442	CEP57L1	Q8IYX8	460 aa		13.62	□□□□□ -0.23
LETMD1-223	ENST00000550442	FMR1NB	Q8N0W7	255 aa	Predicted RBP	13.62	□□□□□ -0.23
LETMD1-223	ENST00000550442	SDF4	Q9BRK5	362 aa		13.62	□□□□□ -0.23
LETMD1-223	ENST00000550442	RIOK1	Q9BRS2	568 aa	Known RBP	13.62	□□□□□ -0.23
LETMD1-223	ENST00000550442	MRVI1	Q9Y6F6	885 aa		13.62	□□□□□ -0.23
LETMD1-223	ENST00000550442	MYH15	Q9Y2K3	1946 aa		13.61	□□□□□ -0.23
LETMD1-223	ENST00000550442	SMTNL1	A8MU46	457 aa		13.61	□□□□□ -0.23
LETMD1-223	ENST00000550442	PPIP5K2	O43314	1243 aa		13.61	□□□□□ -0.23
LETMD1-223	ENST00000550442	CUTA	O60888	179 aa		13.61	□□□□□ -0.23
LETMD1-223	ENST00000550442	BAG3	O95817	575 aa		13.61	□□□□□ -0.23
LETMD1-223	ENST00000550442	ZNF157	P51786	506 aa	Predicted RBP	13.61	□□□□□ -0.23
LETMD1-223	ENST00000550442	COL9A3	Q14050	684 aa	Predicted RBP	13.61	□□□□□ -0.23
LETMD1-223	ENST00000550442	SLFNL1	Q499Z3	407 aa		13.61	□□□□□ -0.23
LETMD1-223	ENST00000550442	CATIP	Q7Z7H3	387 aa		13.61	□□□□□ -0.23
LETMD1-223	ENST00000550442	C2orf69	Q8N8R5	385 aa		13.61	□□□□□ -0.23
LETMD1-223	ENST00000550442	FSIP1	Q8NA03	581 aa		13.61	□□□□□ -0.23
LETMD1-223	ENST00000550442	FANCB	Q8NB91	859 aa		13.61	□□□□□ -0.23
LETMD1-223	ENST00000550442	MRFAP1L1	Q96HT8	127 aa		13.61	□□□□□ -0.23
LETMD1-223	ENST00000550442	ARMT1	Q9H993	441 aa		13.61	□□□□□ -0.23
LETMD1-223	ENST00000550442	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	13.61	□□□□□ -0.23
LETMD1-223	ENST00000550442	BRMS1	Q9HCU9	246 aa		13.61	□□□□□ -0.23
LETMD1-223	ENST00000550442	PCDHA7	Q9UN72	937 aa		13.61	□□□□□ -0.23
LETMD1-223	ENST00000550442	FAM177B	A6PVY3	158 aa		13.6	□□□□□ -0.23
LETMD1-223	ENST00000550442	BECN2	A8MW95	431 aa		13.6	□□□□□ -0.23
LETMD1-223	ENST00000550442	DLL1	O00548	723 aa		13.6	□□□□□ -0.23
LETMD1-223	ENST00000550442	BBOX1	O75936	387 aa		13.6	□□□□□ -0.23
LETMD1-223	ENST00000550442	PLCG2	P16885	1265 aa		13.6	□□□□□ -0.23
LETMD1-223	ENST00000550442	GMPS	P49915	693 aa	Predicted RBP	13.6	□□□□□ -0.23
LETMD1-223	ENST00000550442	GNAQ	P50148	359 aa		13.6	□□□□□ -0.23
LETMD1-223	ENST00000550442	PPP4C	P60510	307 aa		13.6	□□□□□ -0.23
LETMD1-223	ENST00000550442	SEMA3F	Q13275	785 aa		13.6	□□□□□ -0.23
LETMD1-223	ENST00000550442	KRT40	Q6A162	431 aa		13.6	□□□□□ -0.23
LETMD1-223	ENST00000550442	CHST3	Q7LGC8	479 aa		13.6	□□□□□ -0.23
LETMD1-223	ENST00000550442	REM2	Q8IYK8	340 aa	Predicted RBP	13.6	□□□□□ -0.23
LETMD1-223	ENST00000550442	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	13.6	□□□□□ -0.23
LETMD1-223	ENST00000550442	PIBF1	Q8WXW3	757 aa		13.6	□□□□□ -0.23
LETMD1-223	ENST00000550442	TMX4	Q9H1E5	349 aa	Predicted RBP	13.6	□□□□□ -0.23
LETMD1-223	ENST00000550442	GBA2	Q9HCG7	927 aa	Predicted RBP	13.6	□□□□□ -0.23
LETMD1-223	ENST00000550442	PRPF3	O43395	683 aa	Known RBP	13.59	□□□□□ -0.23
LETMD1-223	ENST00000550442	MMP1	P03956	469 aa		13.59	□□□□□ -0.23
LETMD1-223	ENST00000550442	KIF5B	P33176	963 aa		13.59	□□□□□ -0.23
LETMD1-223	ENST00000550442	TRAPPC10	P48553	1259 aa		13.59	□□□□□ -0.23
LETMD1-223	ENST00000550442	GRAP	Q13588	217 aa		13.59	□□□□□ -0.23
LETMD1-223	ENST00000550442	ANO6	Q4KMQ2	910 aa		13.59	□□□□□ -0.23
LETMD1-223	ENST00000550442	FAM173B	Q6P4H8	233 aa		13.59	□□□□□ -0.23
LETMD1-223	ENST00000550442	ZNF804A	Q7Z570	1209 aa		13.59	□□□□□ -0.23
LETMD1-223	ENST00000550442	NOSTRIN	Q8IVI9	506 aa		13.59	□□□□□ -0.23
LETMD1-223	ENST00000550442	LCORL	Q8N3X6	602 aa		13.59	□□□□□ -0.23
LETMD1-223	ENST00000550442	GRAPL	Q8TC17	118 aa	Predicted RBP	13.59	□□□□□ -0.23
LETMD1-223	ENST00000550442	ANKS1A	Q92625	1134 aa		13.59	□□□□□ -0.23
LETMD1-223	ENST00000550442	RPGR	Q92834	1020 aa	Known RBP	13.59	□□□□□ -0.23
LETMD1-223	ENST00000550442	NSUN4	Q96CB9	384 aa	Known RBP	13.59	□□□□□ -0.23
LETMD1-223	ENST00000550442	RTN4	Q9NQC3	1192 aa	Known RBP	13.59	□□□□□ -0.23
LETMD1-223	ENST00000550442	KIAA1468	Q9P260	1216 aa		13.59	□□□□□ -0.23
LETMD1-223	ENST00000550442	ABCF2	Q9UG63	623 aa		13.59	□□□□□ -0.23
LETMD1-223	ENST00000550442	SUGT1	Q9Y2Z0	365 aa		13.59	□□□□□ -0.23
LETMD1-223	ENST00000550442	NEDD4	P46934	1319 aa		13.59	□□□□□ -0.23
LETMD1-223	ENST00000550442	XDH	P47989	1333 aa		13.59	□□□□□ -0.23
LETMD1-223	ENST00000550442	IKBKB	O14920	756 aa		13.58	□□□□□ -0.24
LETMD1-223	ENST00000550442	NRDC	O43847	1150 aa		13.58	□□□□□ -0.24
LETMD1-223	ENST00000550442	TUBB4A	P04350	444 aa		13.58	□□□□□ -0.24
LETMD1-223	ENST00000550442	ATP2B4	P23634	1241 aa		13.58	□□□□□ -0.24
LETMD1-223	ENST00000550442	GALNT17	Q6IS24	598 aa		13.58	□□□□□ -0.24
LETMD1-223	ENST00000550442	DGKH	Q86XP1	1220 aa		13.58	□□□□□ -0.24
LETMD1-223	ENST00000550442	ZNF654	Q8IZM8	581 aa		13.58	□□□□□ -0.24
LETMD1-223	ENST00000550442	TBC1D22A	Q8WUA7	517 aa		13.58	□□□□□ -0.24
LETMD1-223	ENST00000550442	PRIMPOL	Q96LW4	560 aa		13.58	□□□□□ -0.24
LETMD1-223	ENST00000550442	CSRNP1	Q96S65	589 aa		13.58	□□□□□ -0.24
LETMD1-223	ENST00000550442	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	13.58	□□□□□ -0.24
LETMD1-223	ENST00000550442	LZTS2	Q9BRK4	669 aa		13.58	□□□□□ -0.24
LETMD1-223	ENST00000550442	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	13.58	□□□□□ -0.24

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