RNA–Protein interactions for RNA: ENST00000550419.5

CDK4-207, Transcript of cyclin dependent kinase 4, humanhuman

TSL 3

Gene CDK4, Length 919 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-207ENST00000550419 CTNNA3Q9UI47 895 aa20.77■□□□□ 0.92
CDK4-207ENST00000550419 AGTPBP1Q9UPW5 1226 aa20.77■□□□□ 0.92
CDK4-207ENST00000550419 PDHXO00330 501 aa20.76■□□□□ 0.91
CDK4-207ENST00000550419 TBC1D8O95759 1140 aa20.76■□□□□ 0.91
CDK4-207ENST00000550419 NT5C2P49902 561 aa20.76■□□□□ 0.91
CDK4-207ENST00000550419 LBX1P52954 281 aa20.76■□□□□ 0.91
CDK4-207ENST00000550419 USP14P54578 494 aa20.76■□□□□ 0.91
CDK4-207ENST00000550419 HMGCS2P54868 508 aa20.76■□□□□ 0.91
CDK4-207ENST00000550419 MTMR2Q13614 643 aa20.76■□□□□ 0.91
CDK4-207ENST00000550419 C12orf42Q96LP6 360 aa20.76■□□□□ 0.91
CDK4-207ENST00000550419 LOC285556D6RIA3 1793 aa20.76■□□□□ 0.91
CDK4-207ENST00000550419 PLIN4Q96Q06 1357 aa20.75■□□□□ 0.91
CDK4-207ENST00000550419 ORC4O43929 436 aa20.75■□□□□ 0.91
CDK4-207ENST00000550419 CRHR2Q13324 411 aa20.75■□□□□ 0.91
CDK4-207ENST00000550419 TAF1CQ15572 869 aaPredicted RBP20.75■□□□□ 0.91
CDK4-207ENST00000550419 GADL1Q6ZQY3 521 aa20.75■□□□□ 0.91
CDK4-207ENST00000550419 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.75■□□□□ 0.91
CDK4-207ENST00000550419 ZFYVE28Q9HCC9 887 aa20.75■□□□□ 0.91
CDK4-207ENST00000550419 TMOD4Q9NZQ9 345 aa20.75■□□□□ 0.91
CDK4-207ENST00000550419 TSKSQ9UJT2 592 aa20.75■□□□□ 0.91
CDK4-207ENST00000550419 GREB1LQ9C091 1923 aaPredicted RBP20.74■□□□□ 0.91
CDK4-207ENST00000550419 ICA1Q05084 483 aa20.74■□□□□ 0.91
CDK4-207ENST00000550419 CTDSPL2Q05D32 466 aa20.74■□□□□ 0.91
CDK4-207ENST00000550419 PABPC4Q13310 644 aaKnown RBP eCLIP20.74■□□□□ 0.914e-12■■■□□ 17.5
CDK4-207ENST00000550419 USP17L2Q6R6M4 530 aa20.74■□□□□ 0.91
CDK4-207ENST00000550419 SIAH1Q8IUQ4 282 aa20.74■□□□□ 0.91
CDK4-207ENST00000550419 SH2D4AQ9H788 454 aa20.74■□□□□ 0.91
CDK4-207ENST00000550419 IGKV6D-41A0A0C4DH26 115 aa20.73■□□□□ 0.91
CDK4-207ENST00000550419 GPR25O00155 361 aa20.73■□□□□ 0.91
CDK4-207ENST00000550419 ZNF213O14771 459 aa20.73■□□□□ 0.91
CDK4-207ENST00000550419 TLR2O60603 784 aa20.73■□□□□ 0.91
CDK4-207ENST00000550419 PRDM1O75626 825 aa20.73■□□□□ 0.91
CDK4-207ENST00000550419 HOXA7P31268 230 aaPredicted RBP20.73■□□□□ 0.91
CDK4-207ENST00000550419 STK11IPQ8N1F8 1099 aa20.73■□□□□ 0.91
CDK4-207ENST00000550419 NEDD1Q8NHV4 660 aa20.73■□□□□ 0.91
CDK4-207ENST00000550419 ACER1Q8TDN7 264 aa20.73■□□□□ 0.91
CDK4-207ENST00000550419 STAG1Q8WVM7 1258 aa20.73■□□□□ 0.91
CDK4-207ENST00000550419 PARK7Q99497 189 aaKnown RBP20.73■□□□□ 0.91
CDK4-207ENST00000550419 FEZ1Q99689 392 aa20.73■□□□□ 0.91
CDK4-207ENST00000550419 ESYT1Q9BSJ8 1104 aa20.73■□□□□ 0.91
CDK4-207ENST00000550419 RNF41Q9H4P4 317 aaPredicted RBP20.73■□□□□ 0.91
CDK4-207ENST00000550419 ARHGEF10LQ9HCE6 1279 aa20.73■□□□□ 0.91
CDK4-207ENST00000550419 EMILIN3Q9NT22 766 aa20.73■□□□□ 0.91
CDK4-207ENST00000550419 TMX2Q9Y320 296 aa20.73■□□□□ 0.91
CDK4-207ENST00000550419 A0A1W2PRG0 241 aa20.72■□□□□ 0.91
CDK4-207ENST00000550419 CDC45O75419 566 aa20.72■□□□□ 0.91
CDK4-207ENST00000550419 IMMTQ16891 758 aaKnown RBP20.72■□□□□ 0.91
CDK4-207ENST00000550419 PPP4R3BQ5MIZ7 849 aa20.72■□□□□ 0.91
CDK4-207ENST00000550419 AKNAD1Q5T1N1 836 aa20.72■□□□□ 0.91
CDK4-207ENST00000550419 TREML2Q5T2D2 321 aa20.72■□□□□ 0.91
CDK4-207ENST00000550419 CASC1Q6TDU7 716 aa20.72■□□□□ 0.91
CDK4-207ENST00000550419 NBPF3Q9H094 633 aa20.72■□□□□ 0.91
CDK4-207ENST00000550419 R3HDMLQ9H3Y0 253 aa20.72■□□□□ 0.91
CDK4-207ENST00000550419 NYAP2Q9P242 653 aa20.72■□□□□ 0.91
CDK4-207ENST00000550419 PNMA3Q9UL41 463 aa20.72■□□□□ 0.91
CDK4-207ENST00000550419 SYNPO2Q9UMS6 1093 aa20.72■□□□□ 0.91
CDK4-207ENST00000550419 TSPY3P0CV98 308 aa20.71■□□□□ 0.91
CDK4-207ENST00000550419 TSPY8P0CW00 308 aa20.71■□□□□ 0.91
CDK4-207ENST00000550419 COL13A1Q5TAT6 717 aaPredicted RBP20.71■□□□□ 0.91
CDK4-207ENST00000550419 LPAR1Q92633 364 aa20.71■□□□□ 0.91
CDK4-207ENST00000550419 MAP4K1Q92918 833 aa20.71■□□□□ 0.91
CDK4-207ENST00000550419 TACC3Q9Y6A5 838 aa20.71■□□□□ 0.91
CDK4-207ENST00000550419 U3KPZ7 1027 aaPredicted RBP20.71■□□□□ 0.91
CDK4-207ENST00000550419 ADGRA2Q96PE1 1338 aa20.71■□□□□ 0.91
CDK4-207ENST00000550419 LAMA4Q16363 1823 aa20.71■□□□□ 0.91
CDK4-207ENST00000550419 EEF2P13639 858 aaKnown RBP20.7■□□□□ 0.9
CDK4-207ENST00000550419 HAND2P61296 217 aa20.7■□□□□ 0.9
CDK4-207ENST00000550419 TFAP4Q01664 338 aa20.7■□□□□ 0.9
CDK4-207ENST00000550419 PTH1RQ03431 593 aa20.7■□□□□ 0.9
CDK4-207ENST00000550419 MFSD6Q6ZSS7 791 aa20.7■□□□□ 0.9
CDK4-207ENST00000550419 KIAA1211Q6ZU35 1233 aa20.7■□□□□ 0.9
CDK4-207ENST00000550419 MTMR4Q9NYA4 1195 aa20.7■□□□□ 0.9
CDK4-207ENST00000550419 DGKZQ13574 1117 aa20.69■□□□□ 0.9
CDK4-207ENST00000550419 CLEC10AQ8IUN9 316 aa20.69■□□□□ 0.9
CDK4-207ENST00000550419 TBC1D10CQ8IV04 446 aa20.69■□□□□ 0.9
CDK4-207ENST00000550419 ZNF296Q8WUU4 475 aaPredicted RBP20.69■□□□□ 0.9
CDK4-207ENST00000550419 MKL1Q969V6 931 aa20.69■□□□□ 0.9
CDK4-207ENST00000550419 INCENPQ9NQS7 918 aa20.69■□□□□ 0.9
CDK4-207ENST00000550419 TSPY2A6NKD2 308 aa20.68■□□□□ 0.9
CDK4-207ENST00000550419 FKTNO75072 461 aa20.68■□□□□ 0.9
CDK4-207ENST00000550419 VCAM1P19320 739 aa20.68■□□□□ 0.9
CDK4-207ENST00000550419 OSBPP22059 807 aa20.68■□□□□ 0.9
CDK4-207ENST00000550419 NOVP48745 357 aa20.68■□□□□ 0.9
CDK4-207ENST00000550419 C17orf99Q6UX52 265 aa20.68■□□□□ 0.9
CDK4-207ENST00000550419 CEP95Q96GE4 821 aa20.68■□□□□ 0.9
CDK4-207ENST00000550419 ASCC2Q9H1I8 757 aaPredicted RBP20.68■□□□□ 0.9
CDK4-207ENST00000550419 VCPKMTQ9H867 229 aa20.68■□□□□ 0.9
CDK4-207ENST00000550419 TCP11L1Q9NUJ3 509 aa20.68■□□□□ 0.9
CDK4-207ENST00000550419 USP17L15C9J2P7 530 aa20.67■□□□□ 0.9
CDK4-207ENST00000550419 USP17L13C9JLJ4 530 aa20.67■□□□□ 0.9
CDK4-207ENST00000550419 USP17L11C9JVI0 530 aa20.67■□□□□ 0.9
CDK4-207ENST00000550419 USP17L18D6R9N7 530 aa20.67■□□□□ 0.9
CDK4-207ENST00000550419 USP17L22D6RA61 530 aa20.67■□□□□ 0.9
CDK4-207ENST00000550419 USP17L17D6RBQ6 530 aa20.67■□□□□ 0.9
CDK4-207ENST00000550419 USP17L19D6RCP7 530 aa20.67■□□□□ 0.9
CDK4-207ENST00000550419 USP17L20D6RJB6 530 aa20.67■□□□□ 0.9
CDK4-207ENST00000550419 RANBP6O60518 1105 aaKnown RBP20.67■□□□□ 0.9
CDK4-207ENST00000550419 TTLL1O95922 423 aa20.67■□□□□ 0.9
CDK4-207ENST00000550419 CYP2C8P10632 490 aa20.67■□□□□ 0.9
CDK4-207ENST00000550419 GCLCP48506 637 aaPredicted RBP20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms