RNA–Protein interactions for RNA: ENST00000550335.5

HCFC2-204, Transcript of host cell factor C2, humanhuman

TSL 5

Gene HCFC2, Length 1,223 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-204ENST00000550335 SPDYE3A6NKU9 549 aa8.01□□□□□ -1.13
HCFC2-204ENST00000550335 CELA2BP08218 269 aaPredicted RBP8.01□□□□□ -1.13
HCFC2-204ENST00000550335 ASPAP45381 313 aa8.01□□□□□ -1.13
HCFC2-204ENST00000550335 PMS1P54277 932 aaKnown RBP8.01□□□□□ -1.13
HCFC2-204ENST00000550335 DALRD3Q5D0E6 543 aaKnown RBP8.01□□□□□ -1.13
HCFC2-204ENST00000550335 TMEM67Q5HYA8 995 aa8.01□□□□□ -1.13
HCFC2-204ENST00000550335 PRAMEF13Q5VWM6 474 aa8.01□□□□□ -1.13
HCFC2-204ENST00000550335 UBE3DQ7Z6J8 389 aa8.01□□□□□ -1.13
HCFC2-204ENST00000550335 PPFIBP1Q86W92 1011 aa8.01□□□□□ -1.13
HCFC2-204ENST00000550335 SLFN12Q8IYM2 578 aa8.01□□□□□ -1.13
HCFC2-204ENST00000550335 JMYQ8N9B5 988 aa8.01□□□□□ -1.13
HCFC2-204ENST00000550335 EPN3Q9H201 632 aa8.01□□□□□ -1.13
HCFC2-204ENST00000550335 SUCOQ9UBS9 1254 aaKnown RBP8.01□□□□□ -1.13
HCFC2-204ENST00000550335 SUGT1Q9Y2Z0 365 aa8.01□□□□□ -1.13
HCFC2-204ENST00000550335 A0A0A0MRY4 1105 aa8□□□□□ -1.13
HCFC2-204ENST00000550335 C9IYK1 514 aa8□□□□□ -1.13
HCFC2-204ENST00000550335 IRS4O14654 1257 aaPredicted RBP8□□□□□ -1.13
HCFC2-204ENST00000550335 UBOX5O94941 541 aa8□□□□□ -1.13
HCFC2-204ENST00000550335 EPHX1P07099 455 aa8□□□□□ -1.13
HCFC2-204ENST00000550335 NAT2P11245 290 aa8□□□□□ -1.13
HCFC2-204ENST00000550335 ADH5P11766 374 aa8□□□□□ -1.13
HCFC2-204ENST00000550335 AMPD3Q01432 767 aa8□□□□□ -1.13
HCFC2-204ENST00000550335 SOX4Q06945 474 aaPredicted RBP8□□□□□ -1.13
HCFC2-204ENST00000550335 COL9A3Q14050 684 aaPredicted RBP8□□□□□ -1.13
HCFC2-204ENST00000550335 CBX2Q14781 532 aaPredicted RBP8□□□□□ -1.13
HCFC2-204ENST00000550335 FAM209AQ5JX71 171 aa8□□□□□ -1.13
HCFC2-204ENST00000550335 FDX2Q6P4F2 183 aa8□□□□□ -1.13
HCFC2-204ENST00000550335 FBXO11Q86XK2 927 aa8□□□□□ -1.13
HCFC2-204ENST00000550335 PHF6Q8IWS0 365 aaKnown RBP eCLIP8□□□□□ -1.13
HCFC2-204ENST00000550335 MRPL41Q8IXM3 137 aaKnown RBP8□□□□□ -1.13
HCFC2-204ENST00000550335 DTWD1Q8N5C7 304 aa8□□□□□ -1.13
HCFC2-204ENST00000550335 KCT2Q8NC54 265 aa8□□□□□ -1.13
HCFC2-204ENST00000550335 LGR4Q9BXB1 951 aa8□□□□□ -1.13
HCFC2-204ENST00000550335 TMPRSS13Q9BYE2 586 aa8□□□□□ -1.13
HCFC2-204ENST00000550335 MKRN2Q9H000 416 aaKnown RBP8□□□□□ -1.13
HCFC2-204ENST00000550335 RNF208Q9H0X6 261 aa8□□□□□ -1.13
HCFC2-204ENST00000550335 LGR6Q9HBX8 967 aa8□□□□□ -1.13
HCFC2-204ENST00000550335 A0A1W2PQU0 124 aa7.99□□□□□ -1.13
HCFC2-204ENST00000550335 ANKRD34BA5PLL1 514 aa7.99□□□□□ -1.13
HCFC2-204ENST00000550335 FAM229AH3BQW9 127 aa7.99□□□□□ -1.13
HCFC2-204ENST00000550335 ADCY3O60266 1144 aa7.99□□□□□ -1.13
HCFC2-204ENST00000550335 NEFMP07197 916 aa7.99□□□□□ -1.13
HCFC2-204ENST00000550335 MYCLP1P12525 358 aaPredicted RBP7.99□□□□□ -1.13
HCFC2-204ENST00000550335 CCNFP41002 786 aa7.99□□□□□ -1.13
HCFC2-204ENST00000550335 AXDND1Q5T1B0 1012 aaPredicted RBP7.99□□□□□ -1.13
HCFC2-204ENST00000550335 FOXB2Q5VYV0 432 aa7.99□□□□□ -1.13
HCFC2-204ENST00000550335 DCAF15Q66K64 600 aa7.99□□□□□ -1.13
HCFC2-204ENST00000550335 KIAA1211Q6ZU35 1233 aa7.99□□□□□ -1.13
HCFC2-204ENST00000550335 FMR1NBQ8N0W7 255 aaPredicted RBP7.99□□□□□ -1.13
HCFC2-204ENST00000550335 SYNPOQ8N3V7 929 aa7.99□□□□□ -1.13
HCFC2-204ENST00000550335 ISL2Q96A47 359 aa7.99□□□□□ -1.13
HCFC2-204ENST00000550335 HAUS7Q99871 368 aa7.99□□□□□ -1.13
HCFC2-204ENST00000550335 TRAV20A0A0B4J274 112 aa7.98□□□□□ -1.13
HCFC2-204ENST00000550335 RAPGEF3O95398 923 aa7.98□□□□□ -1.13
HCFC2-204ENST00000550335 TRIM28Q13263 835 aaKnown RBP7.98□□□□□ -1.13
HCFC2-204ENST00000550335 SLBPQ14493 270 aaKnown RBP eCLIP7.98□□□□□ -1.13
HCFC2-204ENST00000550335 HSP90AA2PQ14568 343 aaPredicted RBP7.98□□□□□ -1.13
HCFC2-204ENST00000550335 CT47A1Q5JQC4 288 aaPredicted RBP7.98□□□□□ -1.13
HCFC2-204ENST00000550335 YOD1Q5VVQ6 348 aaPredicted RBP7.98□□□□□ -1.13
HCFC2-204ENST00000550335 NIM1KQ8IY84 436 aa7.98□□□□□ -1.13
HCFC2-204ENST00000550335 AGGF1Q8N302 714 aaeCLIP7.98□□□□□ -1.13
HCFC2-204ENST00000550335 SGSM3Q96HU1 749 aa7.98□□□□□ -1.13
HCFC2-204ENST00000550335 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.98□□□□□ -1.13
HCFC2-204ENST00000550335 KLHL42Q9P2K6 505 aa7.98□□□□□ -1.13
HCFC2-204ENST00000550335 RAB6AP20340 208 aa7.97□□□□□ -1.13
HCFC2-204ENST00000550335 NTF4P34130 210 aa7.97□□□□□ -1.13
HCFC2-204ENST00000550335 EVA1CP58658 441 aa7.97□□□□□ -1.13
HCFC2-204ENST00000550335 PABPC4Q13310 644 aaKnown RBP eCLIP7.97□□□□□ -1.13
HCFC2-204ENST00000550335 NOL8Q76FK4 1167 aaKnown RBP7.97□□□□□ -1.13
HCFC2-204ENST00000550335 SMYD4Q8IYR2 804 aaPredicted RBP7.97□□□□□ -1.13
HCFC2-204ENST00000550335 UBR7Q8N806 425 aa7.97□□□□□ -1.13
HCFC2-204ENST00000550335 WHAMMQ8TF30 809 aa7.97□□□□□ -1.13
HCFC2-204ENST00000550335 CYB5D2Q8WUJ1 264 aa7.97□□□□□ -1.13
HCFC2-204ENST00000550335 DHRS4Q9BTZ2 278 aa7.97□□□□□ -1.13
HCFC2-204ENST00000550335 PLVAPQ9BX97 442 aa7.97□□□□□ -1.13
HCFC2-204ENST00000550335 FOXQ1Q9C009 403 aa7.97□□□□□ -1.13
HCFC2-204ENST00000550335 TMX1Q9H3N1 280 aa7.97□□□□□ -1.13
HCFC2-204ENST00000550335 METTL14Q9HCE5 456 aaKnown RBP7.97□□□□□ -1.13
HCFC2-204ENST00000550335 PLAAQ9Y263 795 aa7.97□□□□□ -1.13
HCFC2-204ENST00000550335 SYNGAP1Q96PV0 1343 aa7.97□□□□□ -1.13
HCFC2-204ENST00000550335 TRBV23-1A0A0A0MS06 115 aa7.96□□□□□ -1.14
HCFC2-204ENST00000550335 MEGF11A6BM72 1044 aa7.96□□□□□ -1.14
HCFC2-204ENST00000550335 PRODHO43272 600 aa7.96□□□□□ -1.14
HCFC2-204ENST00000550335 SART1O43290 800 aaKnown RBP7.96□□□□□ -1.14
HCFC2-204ENST00000550335 CST3P01034 146 aaPredicted RBP7.96□□□□□ -1.14
HCFC2-204ENST00000550335 ITGAVP06756 1048 aa7.96□□□□□ -1.14
HCFC2-204ENST00000550335 DGKGP49619 791 aa7.96□□□□□ -1.14
HCFC2-204ENST00000550335 USP11P51784 963 aa7.96□□□□□ -1.14
HCFC2-204ENST00000550335 PPP2R2AP63151 447 aa7.96□□□□□ -1.14
HCFC2-204ENST00000550335 LONRF2Q1L5Z9 754 aa7.96□□□□□ -1.14
HCFC2-204ENST00000550335 ZC3H12BQ5HYM0 836 aaKnown RBP7.96□□□□□ -1.14
HCFC2-204ENST00000550335 CNNM4Q6P4Q7 775 aa7.96□□□□□ -1.14
HCFC2-204ENST00000550335 SMG8Q8ND04 991 aaKnown RBP7.96□□□□□ -1.14
HCFC2-204ENST00000550335 ADCY4Q8NFM4 1077 aa7.96□□□□□ -1.14
HCFC2-204ENST00000550335 MFSD3Q96ES6 412 aa7.96□□□□□ -1.14
HCFC2-204ENST00000550335 EXOC2Q96KP1 924 aa7.96□□□□□ -1.14
HCFC2-204ENST00000550335 AARSD1Q9BTE6 412 aaKnown RBP7.96□□□□□ -1.14
HCFC2-204ENST00000550335 GBP3Q9H0R5 595 aa7.96□□□□□ -1.14
HCFC2-204ENST00000550335 FAM105AQ9NUU6 356 aa7.96□□□□□ -1.14
HCFC2-204ENST00000550335 DDX56Q9NY93 547 aaKnown RBP7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms