RNA–Protein interactions for RNA: ENST00000550325.5

VDR-208, Transcript of vitamin D receptor, humanhuman

TSL 1 (best) BASIC

Gene VDR, Length 3,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-208ENST00000550325 NOC3LQ8WTT2 800 aaKnown RBP13.64□□□□□ -0.23
VDR-208ENST00000550325 EPSTI1Q96J88 318 aa13.64□□□□□ -0.23
VDR-208ENST00000550325 METTL22Q9BUU2 404 aaPredicted RBP13.64□□□□□ -0.23
VDR-208ENST00000550325 NBPF3Q9H094 633 aa13.64□□□□□ -0.23
VDR-208ENST00000550325 PUS7LQ9H0K6 701 aaKnown RBP13.64□□□□□ -0.23
VDR-208ENST00000550325 SCLT1Q96NL6 688 aa13.64□□□□□ -0.23
VDR-208ENST00000550325 AMOTL2Q9Y2J4 779 aa13.64□□□□□ -0.23
VDR-208ENST00000550325 ITSN1Q15811 1721 aa13.64□□□□□ -0.23
VDR-208ENST00000550325 SF3A3Q12874 501 aaKnown RBP eCLIP13.63□□□□□ -0.23
VDR-208ENST00000550325 WDR93Q6P2C0 686 aa13.63□□□□□ -0.23
VDR-208ENST00000550325 NOSTRINQ8IVI9 506 aa13.63□□□□□ -0.23
VDR-208ENST00000550325 MB21D2Q8IYB1 491 aaPredicted RBP13.63□□□□□ -0.23
VDR-208ENST00000550325 RASSF8Q8NHQ8 419 aa13.63□□□□□ -0.23
VDR-208ENST00000550325 ADD3Q9UEY8 706 aaKnown RBP13.63□□□□□ -0.23
VDR-208ENST00000550325 SLC12A7Q9Y666 1083 aa13.63□□□□□ -0.23
VDR-208ENST00000550325 C3P01024 1663 aa13.63□□□□□ -0.23
VDR-208ENST00000550325 IDH1O75874 414 aaKnown RBP13.63□□□□□ -0.23
VDR-208ENST00000550325 CPP00450 1065 aa13.63□□□□□ -0.23
VDR-208ENST00000550325 EZH2Q15910 746 aaKnown RBP13.63□□□□□ -0.23
VDR-208ENST00000550325 SWT1Q5T5J6 900 aaKnown RBP13.63□□□□□ -0.23
VDR-208ENST00000550325 N4BP2L2Q92802 583 aaPredicted RBP13.63□□□□□ -0.23
VDR-208ENST00000550325 hCG_1642624A0A1W2PR95 340 aa13.63□□□□□ -0.23
VDR-208ENST00000550325 IFIT3O14879 490 aaKnown RBP13.63□□□□□ -0.23
VDR-208ENST00000550325 GPAA1O43292 621 aa13.63□□□□□ -0.23
VDR-208ENST00000550325 NAP1L1P55209 391 aaKnown RBP13.63□□□□□ -0.23
VDR-208ENST00000550325 CCDC181Q5TID7 509 aa13.63□□□□□ -0.23
VDR-208ENST00000550325 CCDC196A0A1B0GTZ2 297 aa13.62□□□□□ -0.23
VDR-208ENST00000550325 HSF2BPO75031 334 aa13.62□□□□□ -0.23
VDR-208ENST00000550325 CXCR5P32302 372 aa13.62□□□□□ -0.23
VDR-208ENST00000550325 GUCY1A2P33402 732 aa13.62□□□□□ -0.23
VDR-208ENST00000550325 ARHGAP25P42331 645 aa13.62□□□□□ -0.23
VDR-208ENST00000550325 CKAP4Q07065 602 aaKnown RBP13.62□□□□□ -0.23
VDR-208ENST00000550325 KRT31Q15323 416 aa13.62□□□□□ -0.23
VDR-208ENST00000550325 CYB5R4Q7L1T6 521 aa13.62□□□□□ -0.23
VDR-208ENST00000550325 RPAINQ86UA6 219 aa13.62□□□□□ -0.23
VDR-208ENST00000550325 PUS3Q9BZE2 481 aaKnown RBP13.62□□□□□ -0.23
VDR-208ENST00000550325 CEP126Q9P2H0 1117 aa13.62□□□□□ -0.23
VDR-208ENST00000550325 ABCC6O95255 1503 aa13.62□□□□□ -0.23
VDR-208ENST00000550325 NCAPD2Q15021 1401 aa13.62□□□□□ -0.23
VDR-208ENST00000550325 ZMYM6O95789 1325 aa13.62□□□□□ -0.23
VDR-208ENST00000550325 EIF3HO15372 352 aaKnown RBP eCLIP13.62□□□□□ -0.23
VDR-208ENST00000550325 NDUFA10O95299 355 aa13.62□□□□□ -0.23
VDR-208ENST00000550325 RFX5P48382 616 aaPredicted RBP13.62□□□□□ -0.23
VDR-208ENST00000550325 MDM2Q00987 491 aaPredicted RBP13.62□□□□□ -0.23
VDR-208ENST00000550325 VIPAS39Q9H9C1 493 aa13.62□□□□□ -0.23
VDR-208ENST00000550325 SLC24A3Q9HC58 644 aa13.62□□□□□ -0.23
VDR-208ENST00000550325 SMARCAL1Q9NZC9 954 aa13.62□□□□□ -0.23
VDR-208ENST00000550325 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.62□□□□□ -0.23
VDR-208ENST00000550325 CYP27A1Q02318 531 aa13.62□□□□□ -0.23
VDR-208ENST00000550325 APOA5Q6Q788 366 aa13.62□□□□□ -0.23
VDR-208ENST00000550325 TRIM22Q8IYM9 498 aa13.62□□□□□ -0.23
VDR-208ENST00000550325 DONSONQ9NYP3 566 aa13.62□□□□□ -0.23
VDR-208ENST00000550325 NEBLO76041 1014 aa13.61□□□□□ -0.23
VDR-208ENST00000550325 ADORA1P30542 326 aa13.61□□□□□ -0.23
VDR-208ENST00000550325 KIRREL3Q8IZU9 778 aa13.61□□□□□ -0.23
VDR-208ENST00000550325 ERCC5P28715 1186 aaPredicted RBP13.61□□□□□ -0.23
VDR-208ENST00000550325 HPDP32754 393 aaPredicted RBP13.61□□□□□ -0.23
VDR-208ENST00000550325 AARSP49588 968 aaKnown RBP eCLIP13.61□□□□□ -0.23
VDR-208ENST00000550325 IFT88Q13099 833 aa13.61□□□□□ -0.23
VDR-208ENST00000550325 E2F5Q15329 346 aa13.61□□□□□ -0.23
VDR-208ENST00000550325 KANK3Q6NY19 840 aa13.61□□□□□ -0.23
VDR-208ENST00000550325 TTC5Q8N0Z6 440 aa13.61□□□□□ -0.23
VDR-208ENST00000550325 HDAC7Q8WUI4 952 aa13.61□□□□□ -0.23
VDR-208ENST00000550325 IFT81Q8WYA0 676 aa13.61□□□□□ -0.23
VDR-208ENST00000550325 ARL8AQ96BM9 186 aa13.61□□□□□ -0.23
VDR-208ENST00000550325 TNRQ92752 1358 aa13.61□□□□□ -0.23
VDR-208ENST00000550325 OPA1O60313 960 aa13.61□□□□□ -0.23
VDR-208ENST00000550325 ZPR1O75312 459 aa13.61□□□□□ -0.23
VDR-208ENST00000550325 ZAP70P43403 619 aa13.61□□□□□ -0.23
VDR-208ENST00000550325 NBPF14Q5TI25 921 aa13.61□□□□□ -0.23
VDR-208ENST00000550325 CCNI2Q6ZMN8 369 aaPredicted RBP13.61□□□□□ -0.23
VDR-208ENST00000550325 LUC7L2Q9Y383 392 aaKnown RBP13.61□□□□□ -0.23
VDR-208ENST00000550325 MON2Q7Z3U7 1717 aa13.61□□□□□ -0.23
VDR-208ENST00000550325 CRYBG1Q9Y4K1 1723 aa13.61□□□□□ -0.23
VDR-208ENST00000550325 CEMIPQ8WUJ3 1361 aa13.61□□□□□ -0.23
VDR-208ENST00000550325 AGPSO00116 658 aa13.6□□□□□ -0.23
VDR-208ENST00000550325 GUCY1A3Q02108 690 aa13.6□□□□□ -0.23
VDR-208ENST00000550325 B4GALNT4Q76KP1 1039 aa13.6□□□□□ -0.23
VDR-208ENST00000550325 DUSP10Q9Y6W6 482 aa13.6□□□□□ -0.23
VDR-208ENST00000550325 MMP14P50281 582 aa13.6□□□□□ -0.23
VDR-208ENST00000550325 CCDC96Q2M329 555 aa13.6□□□□□ -0.23
VDR-208ENST00000550325 NKX2-3Q8TAU0 364 aa13.6□□□□□ -0.23
VDR-208ENST00000550325 SMCR8Q8TEV9 937 aaPredicted RBP13.6□□□□□ -0.23
VDR-208ENST00000550325 PALLDQ8WX93 1383 aa13.6□□□□□ -0.23
VDR-208ENST00000550325 SPATA31D1Q6ZQQ2 1576 aa13.6□□□□□ -0.23
VDR-208ENST00000550325 KRT86O43790 486 aa13.6□□□□□ -0.23
VDR-208ENST00000550325 RANBP6O60518 1105 aaKnown RBP13.6□□□□□ -0.23
VDR-208ENST00000550325 COPB1P53618 953 aaKnown RBP13.6□□□□□ -0.23
VDR-208ENST00000550325 CCDC114Q96M63 670 aa13.6□□□□□ -0.23
VDR-208ENST00000550325 VPS54Q9P1Q0 977 aa13.6□□□□□ -0.23
VDR-208ENST00000550325 FBXO2Q9UK22 296 aaPredicted RBP13.6□□□□□ -0.23
VDR-208ENST00000550325 UBN2Q6ZU65 1347 aa13.6□□□□□ -0.23
VDR-208ENST00000550325 CACNA1FO60840 1977 aa13.6□□□□□ -0.23
VDR-208ENST00000550325 PATL2C9JE40 543 aaKnown RBP13.59□□□□□ -0.23
VDR-208ENST00000550325 KRT14P02533 472 aa13.59□□□□□ -0.23
VDR-208ENST00000550325 PDE6BP35913 854 aa13.59□□□□□ -0.23
VDR-208ENST00000550325 AMPD2Q01433 879 aa13.59□□□□□ -0.23
VDR-208ENST00000550325 TRAPPC11Q7Z392 1133 aa13.59□□□□□ -0.23
VDR-208ENST00000550325 TBC1D10CQ8IV04 446 aa13.59□□□□□ -0.23
VDR-208ENST00000550325 OXER1Q8TDS5 423 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms