RNA–Protein interactions for RNA: ENST00000550020.6

TMEM116-209, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-209ENST00000550020 GUCY1A2P33402 732 aa10.22□□□□□ -0.77
TMEM116-209ENST00000550020 GTF2F1P35269 517 aaKnown RBP eCLIP10.22□□□□□ -0.77
TMEM116-209ENST00000550020 TOB1P50616 345 aaPredicted RBP10.22□□□□□ -0.77
TMEM116-209ENST00000550020 FUT2Q10981 343 aa10.22□□□□□ -0.77
TMEM116-209ENST00000550020 SEMA3FQ13275 785 aa10.22□□□□□ -0.77
TMEM116-209ENST00000550020 PFKFB3Q16875 520 aaPredicted RBP10.22□□□□□ -0.77
TMEM116-209ENST00000550020 TPD52L1Q16890 204 aaPredicted RBP10.22□□□□□ -0.77
TMEM116-209ENST00000550020 CRY2Q49AN0 593 aa10.22□□□□□ -0.77
TMEM116-209ENST00000550020 PPP4R3BQ5MIZ7 849 aa10.22□□□□□ -0.77
TMEM116-209ENST00000550020 TTC38Q5R3I4 469 aa10.22□□□□□ -0.77
TMEM116-209ENST00000550020 NT5DC1Q5TFE4 455 aa10.22□□□□□ -0.77
TMEM116-209ENST00000550020 CCDC82Q8N4S0 544 aa10.22□□□□□ -0.77
TMEM116-209ENST00000550020 MPNDQ8N594 471 aa10.22□□□□□ -0.77
TMEM116-209ENST00000550020 NKX2-3Q8TAU0 364 aa10.22□□□□□ -0.77
TMEM116-209ENST00000550020 PODXL2Q9NZ53 605 aa10.22□□□□□ -0.77
TMEM116-209ENST00000550020 PYCARDQ9ULZ3 195 aa10.22□□□□□ -0.77
TMEM116-209ENST00000550020 SUGT1Q9Y2Z0 365 aa10.22□□□□□ -0.77
TMEM116-209ENST00000550020 IRS2Q9Y4H2 1338 aa10.22□□□□□ -0.77
TMEM116-209ENST00000550020 LY75O60449 1722 aa10.21□□□□□ -0.77
TMEM116-209ENST00000550020 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.21□□□□□ -0.77
TMEM116-209ENST00000550020 BIN1O00499 593 aa10.21□□□□□ -0.77
TMEM116-209ENST00000550020 PRDM1O75626 825 aa10.21□□□□□ -0.77
TMEM116-209ENST00000550020 UFL1O94874 794 aa10.21□□□□□ -0.77
TMEM116-209ENST00000550020 TSPY3P0CV98 308 aa10.21□□□□□ -0.77
TMEM116-209ENST00000550020 TSPY8P0CW00 308 aa10.21□□□□□ -0.77
TMEM116-209ENST00000550020 IL1R1P14778 569 aa10.21□□□□□ -0.77
TMEM116-209ENST00000550020 SFPQP23246 707 aaKnown RBP eCLIP10.21□□□□□ -0.77
TMEM116-209ENST00000550020 KLRK1P26718 216 aa10.21□□□□□ -0.77
TMEM116-209ENST00000550020 SMARCA1P28370 1054 aa10.21□□□□□ -0.77
TMEM116-209ENST00000550020 ERCC5P28715 1186 aaPredicted RBP10.21□□□□□ -0.77
TMEM116-209ENST00000550020 HOXA10P31260 410 aaPredicted RBP10.21□□□□□ -0.77
TMEM116-209ENST00000550020 TFAP4Q01664 338 aa10.21□□□□□ -0.77
TMEM116-209ENST00000550020 HSP90AA2PQ14568 343 aaPredicted RBP10.21□□□□□ -0.77
TMEM116-209ENST00000550020 PKN1Q16512 942 aa10.21□□□□□ -0.77
TMEM116-209ENST00000550020 LONRF3Q496Y0 759 aa10.21□□□□□ -0.77
TMEM116-209ENST00000550020 ARL6IP4Q66PJ3 421 aaKnown RBP10.21□□□□□ -0.77
TMEM116-209ENST00000550020 PRR5LQ6MZQ0 368 aa10.21□□□□□ -0.77
TMEM116-209ENST00000550020 FILIP1Q7Z7B0 1213 aa10.21□□□□□ -0.77
TMEM116-209ENST00000550020 SEPT12Q8IYM1 358 aa10.21□□□□□ -0.77
TMEM116-209ENST00000550020 ZNF384Q8TF68 577 aa10.21□□□□□ -0.77
TMEM116-209ENST00000550020 CACTINQ8WUQ7 758 aaKnown RBP10.21□□□□□ -0.77
TMEM116-209ENST00000550020 CLIC6Q96NY7 704 aa10.21□□□□□ -0.77
TMEM116-209ENST00000550020 GTPBP4Q9BZE4 634 aaKnown RBP10.21□□□□□ -0.77
TMEM116-209ENST00000550020 ANO8Q9HCE9 1232 aaPredicted RBP10.21□□□□□ -0.77
TMEM116-209ENST00000550020 IFNKQ9P0W0 207 aa10.21□□□□□ -0.77
TMEM116-209ENST00000550020 VPS54Q9P1Q0 977 aa10.21□□□□□ -0.77
TMEM116-209ENST00000550020 TAOK2Q9UL54 1235 aa10.21□□□□□ -0.77
TMEM116-209ENST00000550020 PCDHB6Q9Y5E3 794 aa10.21□□□□□ -0.77
TMEM116-209ENST00000550020 PCDHA5Q9Y5H7 936 aa10.21□□□□□ -0.77
TMEM116-209ENST00000550020 AFF2P51816 1311 aa10.21□□□□□ -0.78
TMEM116-209ENST00000550020 CNTNAP5Q8WYK1 1306 aa10.21□□□□□ -0.78
TMEM116-209ENST00000550020 KIAA1551Q9HCM1 1747 aa10.21□□□□□ -0.78
TMEM116-209ENST00000550020 MYO5AQ9Y4I1 1855 aaKnown RBP10.21□□□□□ -0.78
TMEM116-209ENST00000550020 CYP2D7A0A087X1C5 515 aa10.2□□□□□ -0.78
TMEM116-209ENST00000550020 LAD1O00515 517 aa10.2□□□□□ -0.78
TMEM116-209ENST00000550020 POLR2DO15514 142 aaKnown RBP10.2□□□□□ -0.78
TMEM116-209ENST00000550020 PLEKHA8P1O95397 391 aa10.2□□□□□ -0.78
TMEM116-209ENST00000550020 SERPINB2P05120 415 aa10.2□□□□□ -0.78
TMEM116-209ENST00000550020 SLFN14P0C7P3 912 aa10.2□□□□□ -0.78
TMEM116-209ENST00000550020 UBASH3AP57075 661 aa10.2□□□□□ -0.78
TMEM116-209ENST00000550020 FANCCQ00597 558 aa10.2□□□□□ -0.78
TMEM116-209ENST00000550020 NR5A1Q13285 461 aa10.2□□□□□ -0.78
TMEM116-209ENST00000550020 PNOCQ13519 176 aa10.2□□□□□ -0.78
TMEM116-209ENST00000550020 GRM4Q14833 912 aa10.2□□□□□ -0.78
TMEM116-209ENST00000550020 METTL16Q86W50 562 aaKnown RBP10.2□□□□□ -0.78
TMEM116-209ENST00000550020 IQUBQ8NA54 791 aa10.2□□□□□ -0.78
TMEM116-209ENST00000550020 PNMA1Q8ND90 353 aa10.2□□□□□ -0.78
TMEM116-209ENST00000550020 ENOX1Q8TC92 643 aaKnown RBP10.2□□□□□ -0.78
TMEM116-209ENST00000550020 FBXW7Q969H0 707 aa10.2□□□□□ -0.78
TMEM116-209ENST00000550020 FAM163AQ96GL9 167 aaPredicted RBP10.2□□□□□ -0.78
TMEM116-209ENST00000550020 GSDMAQ96QA5 445 aa10.2□□□□□ -0.78
TMEM116-209ENST00000550020 XPO4Q9C0E2 1151 aaKnown RBP10.2□□□□□ -0.78
TMEM116-209ENST00000550020 PDCL3Q9H2J4 239 aa10.2□□□□□ -0.78
TMEM116-209ENST00000550020 CD209Q9NNX6 404 aa10.2□□□□□ -0.78
TMEM116-209ENST00000550020 RMND1Q9NWS8 449 aa10.2□□□□□ -0.78
TMEM116-209ENST00000550020 NRBP1Q9UHY1 535 aa10.2□□□□□ -0.78
TMEM116-209ENST00000550020 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.19□□□□□ -0.78
TMEM116-209ENST00000550020 GPR75-ASB3A0A0A6YYF3 556 aa10.19□□□□□ -0.78
TMEM116-209ENST00000550020 PSDA5PKW4 1024 aaPredicted RBP10.19□□□□□ -0.78
TMEM116-209ENST00000550020 hCG_1984214I3L0E3 225 aa10.19□□□□□ -0.78
TMEM116-209ENST00000550020 ATP2B1P20020 1258 aa10.19□□□□□ -0.78
TMEM116-209ENST00000550020 CDK11BP21127 795 aaKnown RBP10.19□□□□□ -0.78
TMEM116-209ENST00000550020 LONP1P36776 959 aaKnown RBP10.19□□□□□ -0.78
TMEM116-209ENST00000550020 SARSP49591 514 aaKnown RBP10.19□□□□□ -0.78
TMEM116-209ENST00000550020 GPSM2P81274 684 aa10.19□□□□□ -0.78
TMEM116-209ENST00000550020 ATP2C1P98194 919 aaPredicted RBP10.19□□□□□ -0.78
TMEM116-209ENST00000550020 MDM2Q00987 491 aaPredicted RBP10.19□□□□□ -0.78
TMEM116-209ENST00000550020 ORC2Q13416 577 aaPredicted RBP10.19□□□□□ -0.78
TMEM116-209ENST00000550020 MORC3Q14149 939 aa10.19□□□□□ -0.78
TMEM116-209ENST00000550020 NCAPHQ15003 741 aa10.19□□□□□ -0.78
TMEM116-209ENST00000550020 PTPN14Q15678 1187 aa10.19□□□□□ -0.78
TMEM116-209ENST00000550020 CFAP100Q494V2 611 aa10.19□□□□□ -0.78
TMEM116-209ENST00000550020 GLIPR1L2Q4G1C9 344 aa10.19□□□□□ -0.78
TMEM116-209ENST00000550020 FAM47AQ5JRC9 791 aa10.19□□□□□ -0.78
TMEM116-209ENST00000550020 PTF1AQ7RTS3 328 aa10.19□□□□□ -0.78
TMEM116-209ENST00000550020 TMC6Q7Z403 805 aa10.19□□□□□ -0.78
TMEM116-209ENST00000550020 FCHSD1Q86WN1 690 aa10.19□□□□□ -0.78
TMEM116-209ENST00000550020 BLIDQ8IZY5 108 aa10.19□□□□□ -0.78
TMEM116-209ENST00000550020 CMTR1Q8N1G2 835 aaKnown RBP10.19□□□□□ -0.78
TMEM116-209ENST00000550020 SRBD1Q8N5C6 995 aaKnown RBP10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms