RNA–Protein interactions for RNA: ENST00000550016.5

DDX54-207, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-207ENST00000550016 MYH4Q9Y623 1939 aa23.01■■□□□ 1.27
DDX54-207ENST00000550016 LBX1P52954 281 aa23■■□□□ 1.27
DDX54-207ENST00000550016 HMGCS2P54868 508 aa23■■□□□ 1.27
DDX54-207ENST00000550016 MTMR2Q13614 643 aa23■■□□□ 1.27
DDX54-207ENST00000550016 CTNNA3Q9UI47 895 aa23■■□□□ 1.27
DDX54-207ENST00000550016 PDHXO00330 501 aa22.99■■□□□ 1.27
DDX54-207ENST00000550016 PRDM1O75626 825 aa22.99■■□□□ 1.27
DDX54-207ENST00000550016 TAF1CQ15572 869 aaPredicted RBP22.99■■□□□ 1.27
DDX54-207ENST00000550016 FEZ1Q99689 392 aa22.99■■□□□ 1.27
DDX54-207ENST00000550016 TMOD4Q9NZQ9 345 aa22.99■■□□□ 1.27
DDX54-207ENST00000550016 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.99■■□□□ 1.27
DDX54-207ENST00000550016 ZNF213O14771 459 aa22.98■■□□□ 1.27
DDX54-207ENST00000550016 HAND2P61296 217 aa22.98■■□□□ 1.27
DDX54-207ENST00000550016 CRHR2Q13324 411 aa22.98■■□□□ 1.27
DDX54-207ENST00000550016 USP17L2Q6R6M4 530 aa22.98■■□□□ 1.27
DDX54-207ENST00000550016 ACER1Q8TDN7 264 aa22.98■■□□□ 1.27
DDX54-207ENST00000550016 ESYT1Q9BSJ8 1104 aa22.98■■□□□ 1.27
DDX54-207ENST00000550016 KIAA1683Q9H0B3 1180 aa22.98■■□□□ 1.27
DDX54-207ENST00000550016 R3HDMLQ9H3Y0 253 aa22.98■■□□□ 1.27
DDX54-207ENST00000550016 KANSL2Q9H9L4 492 aa22.98■■□□□ 1.27
DDX54-207ENST00000550016 ZFYVE28Q9HCC9 887 aa22.98■■□□□ 1.27
DDX54-207ENST00000550016 AGTPBP1Q9UPW5 1226 aa22.98■■□□□ 1.27
DDX54-207ENST00000550016 SLC45A1Q9Y2W3 748 aa22.98■■□□□ 1.27
DDX54-207ENST00000550016 ORC4O43929 436 aa22.97■■□□□ 1.27
DDX54-207ENST00000550016 CDC45O75419 566 aa22.97■■□□□ 1.27
DDX54-207ENST00000550016 FGRP09769 529 aa22.97■■□□□ 1.27
DDX54-207ENST00000550016 CASC1Q6TDU7 716 aa22.97■■□□□ 1.27
DDX54-207ENST00000550016 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.97■■□□□ 1.27
DDX54-207ENST00000550016 ARHGEF10LQ9HCE6 1279 aa22.97■■□□□ 1.27
DDX54-207ENST00000550016 INCENPQ9NQS7 918 aa22.97■■□□□ 1.27
DDX54-207ENST00000550016 PRDM10Q9NQV6 1147 aa22.97■■□□□ 1.27
DDX54-207ENST00000550016 TACC3Q9Y6A5 838 aa22.97■■□□□ 1.27
DDX54-207ENST00000550016 USP14P54578 494 aa22.96■■□□□ 1.27
DDX54-207ENST00000550016 PTH1RQ03431 593 aa22.96■■□□□ 1.27
DDX54-207ENST00000550016 ICA1Q05084 483 aa22.96■■□□□ 1.27
DDX54-207ENST00000550016 NOM1Q5C9Z4 860 aaKnown RBP22.96■■□□□ 1.27
DDX54-207ENST00000550016 KIAA1211Q6ZU35 1233 aa22.96■■□□□ 1.27
DDX54-207ENST00000550016 SIAH1Q8IUQ4 282 aa22.96■■□□□ 1.27
DDX54-207ENST00000550016 EMILIN3Q9NT22 766 aa22.96■■□□□ 1.27
DDX54-207ENST00000550016 TSPY3P0CV98 308 aa22.95■■□□□ 1.26
DDX54-207ENST00000550016 TSPY8P0CW00 308 aa22.95■■□□□ 1.26
DDX54-207ENST00000550016 PCP11498 1178 aaKnown RBP22.95■■□□□ 1.26
DDX54-207ENST00000550016 TFAP4Q01664 338 aa22.95■■□□□ 1.26
DDX54-207ENST00000550016 PABPC4Q13310 644 aaKnown RBP eCLIP22.95■■□□□ 1.26
DDX54-207ENST00000550016 DGKZQ13574 1117 aa22.95■■□□□ 1.26
DDX54-207ENST00000550016 IMMTQ16891 758 aaKnown RBP22.95■■□□□ 1.26
DDX54-207ENST00000550016 AKNAD1Q5T1N1 836 aa22.95■■□□□ 1.26
DDX54-207ENST00000550016 TREML2Q5T2D2 321 aa22.95■■□□□ 1.26
DDX54-207ENST00000550016 CLEC10AQ8IUN9 316 aa22.95■■□□□ 1.26
DDX54-207ENST00000550016 NEDD1Q8NHV4 660 aa22.95■■□□□ 1.26
DDX54-207ENST00000550016 NBPF3Q9H094 633 aa22.95■■□□□ 1.26
DDX54-207ENST00000550016 A0A1W2PRG0 241 aa22.94■■□□□ 1.26
DDX54-207ENST00000550016 GPR25O00155 361 aa22.94■■□□□ 1.26
DDX54-207ENST00000550016 EEF2P13639 858 aaKnown RBP22.94■■□□□ 1.26
DDX54-207ENST00000550016 ZYXQ15942 572 aaKnown RBP22.94■■□□□ 1.26
DDX54-207ENST00000550016 FAM47AQ5JRC9 791 aa22.94■■□□□ 1.26
DDX54-207ENST00000550016 MFSD6Q6ZSS7 791 aa22.94■■□□□ 1.26
DDX54-207ENST00000550016 STAG1Q8WVM7 1258 aa22.94■■□□□ 1.26
DDX54-207ENST00000550016 C12orf42Q96LP6 360 aa22.94■■□□□ 1.26
DDX54-207ENST00000550016 RNF41Q9H4P4 317 aaPredicted RBP22.94■■□□□ 1.26
DDX54-207ENST00000550016 SH2D4AQ9H788 454 aa22.94■■□□□ 1.26
DDX54-207ENST00000550016 TMX2Q9Y320 296 aa22.94■■□□□ 1.26
DDX54-207ENST00000550016 U3KPZ7 1027 aaPredicted RBP22.94■■□□□ 1.26
DDX54-207ENST00000550016 PLIN4Q96Q06 1357 aa22.93■■□□□ 1.26
DDX54-207ENST00000550016 IGKV6D-41A0A0C4DH26 115 aa22.93■■□□□ 1.26
DDX54-207ENST00000550016 RANBP6O60518 1105 aaKnown RBP22.93■■□□□ 1.26
DDX54-207ENST00000550016 TLR2O60603 784 aa22.93■■□□□ 1.26
DDX54-207ENST00000550016 ATP2B2Q01814 1243 aa22.93■■□□□ 1.26
DDX54-207ENST00000550016 TBC1D10CQ8IV04 446 aa22.93■■□□□ 1.26
DDX54-207ENST00000550016 MAP4K1Q92918 833 aa22.93■■□□□ 1.26
DDX54-207ENST00000550016 PARK7Q99497 189 aaKnown RBP22.93■■□□□ 1.26
DDX54-207ENST00000550016 TOMM22Q9NS69 142 aa22.93■■□□□ 1.26
DDX54-207ENST00000550016 NYAP2Q9P242 653 aa22.93■■□□□ 1.26
DDX54-207ENST00000550016 TSPY2A6NKD2 308 aa22.92■■□□□ 1.26
DDX54-207ENST00000550016 HOXA7P31268 230 aaPredicted RBP22.92■■□□□ 1.26
DDX54-207ENST00000550016 RRP12Q5JTH9 1297 aaKnown RBP22.92■■□□□ 1.26
DDX54-207ENST00000550016 PNMA3Q9UL41 463 aa22.92■■□□□ 1.26
DDX54-207ENST00000550016 CYP2C8P10632 490 aa22.91■■□□□ 1.26
DDX54-207ENST00000550016 OSBPP22059 807 aa22.91■■□□□ 1.26
DDX54-207ENST00000550016 CEP95Q96GE4 821 aa22.91■■□□□ 1.26
DDX54-207ENST00000550016 MTMR4Q9NYA4 1195 aa22.91■■□□□ 1.26
DDX54-207ENST00000550016 FKTNO75072 461 aa22.9■■□□□ 1.26
DDX54-207ENST00000550016 PPP4R3BQ5MIZ7 849 aa22.9■■□□□ 1.26
DDX54-207ENST00000550016 ZNF296Q8WUU4 475 aaPredicted RBP22.9■■□□□ 1.26
DDX54-207ENST00000550016 LSG1Q9H089 658 aaKnown RBP22.9■■□□□ 1.26
DDX54-207ENST00000550016 ASCC2Q9H1I8 757 aaPredicted RBP22.9■■□□□ 1.26
DDX54-207ENST00000550016 VCPKMTQ9H867 229 aa22.9■■□□□ 1.26
DDX54-207ENST00000550016 CLIP2Q9UDT6 1046 aa22.9■■□□□ 1.26
DDX54-207ENST00000550016 ADGRA2Q96PE1 1338 aa22.89■■□□□ 1.26
DDX54-207ENST00000550016 TTLL1O95922 423 aa22.89■■□□□ 1.25
DDX54-207ENST00000550016 VCAM1P19320 739 aa22.89■■□□□ 1.25
DDX54-207ENST00000550016 NT5C2P49902 561 aa22.89■■□□□ 1.25
DDX54-207ENST00000550016 LPAR1Q92633 364 aa22.89■■□□□ 1.25
DDX54-207ENST00000550016 MKL1Q969V6 931 aa22.89■■□□□ 1.25
DDX54-207ENST00000550016 ANO2Q9NQ90 1003 aa22.89■■□□□ 1.25
DDX54-207ENST00000550016 RBM8AQ9Y5S9 174 aaKnown RBP22.89■■□□□ 1.25
DDX54-207ENST00000550016 MGAMO43451 1857 aa22.88■■□□□ 1.25
DDX54-207ENST00000550016 USP17L15C9J2P7 530 aa22.88■■□□□ 1.25
DDX54-207ENST00000550016 USP17L13C9JLJ4 530 aa22.88■■□□□ 1.25
DDX54-207ENST00000550016 USP17L11C9JVI0 530 aa22.88■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms