RNA–Protein interactions for RNA: ENST00000548277.1

TRAFD1-205, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-205ENST00000548277 MORN1Q5T089 497 aa14.58□□□□□ -0.08
TRAFD1-205ENST00000548277 ACER1Q8TDN7 264 aa14.58□□□□□ -0.08
TRAFD1-205ENST00000548277 USP6NLQ92738 828 aa14.58□□□□□ -0.08
TRAFD1-205ENST00000548277 EDC3Q96F86 508 aaKnown RBP14.58□□□□□ -0.08
TRAFD1-205ENST00000548277 FLRT1Q9NZU1 646 aa14.58□□□□□ -0.08
TRAFD1-205ENST00000548277 SMCHD1A6NHR9 2005 aa14.58□□□□□ -0.08
TRAFD1-205ENST00000548277 USP17L15C9J2P7 530 aa14.57□□□□□ -0.08
TRAFD1-205ENST00000548277 USP17L13C9JLJ4 530 aa14.57□□□□□ -0.08
TRAFD1-205ENST00000548277 USP17L11C9JVI0 530 aa14.57□□□□□ -0.08
TRAFD1-205ENST00000548277 USP17L18D6R9N7 530 aa14.57□□□□□ -0.08
TRAFD1-205ENST00000548277 USP17L22D6RA61 530 aa14.57□□□□□ -0.08
TRAFD1-205ENST00000548277 USP17L17D6RBQ6 530 aa14.57□□□□□ -0.08
TRAFD1-205ENST00000548277 USP17L19D6RCP7 530 aa14.57□□□□□ -0.08
TRAFD1-205ENST00000548277 USP17L20D6RJB6 530 aa14.57□□□□□ -0.08
TRAFD1-205ENST00000548277 CNMDO75829 334 aa14.57□□□□□ -0.08
TRAFD1-205ENST00000548277 PLCD1P51178 756 aa14.57□□□□□ -0.08
TRAFD1-205ENST00000548277 USP17L24Q0WX57 530 aa14.57□□□□□ -0.08
TRAFD1-205ENST00000548277 MAP2K5Q13163 448 aa14.57□□□□□ -0.08
TRAFD1-205ENST00000548277 ABCB5Q2M3G0 1257 aa14.57□□□□□ -0.08
TRAFD1-205ENST00000548277 LHX8Q68G74 356 aa14.57□□□□□ -0.08
TRAFD1-205ENST00000548277 FTSJ3Q8IY81 847 aaKnown RBP14.57□□□□□ -0.08
TRAFD1-205ENST00000548277 SENP6Q9GZR1 1112 aaPredicted RBP14.57□□□□□ -0.08
TRAFD1-205ENST00000548277 GINM1Q9NU53 330 aa14.57□□□□□ -0.08
TRAFD1-205ENST00000548277 BAZ2AQ9UIF9 1905 aaKnown RBP14.56□□□□□ -0.08
TRAFD1-205ENST00000548277 POLR3DP05423 398 aaPredicted RBP14.56□□□□□ -0.08
TRAFD1-205ENST00000548277 ATP2B2Q01814 1243 aa14.56□□□□□ -0.08
TRAFD1-205ENST00000548277 TATDN1Q6P1N9 297 aa14.56□□□□□ -0.08
TRAFD1-205ENST00000548277 CATSPERGQ6ZRH7 1159 aa14.56□□□□□ -0.08
TRAFD1-205ENST00000548277 TRMT44Q8IYL2 757 aaKnown RBP14.56□□□□□ -0.08
TRAFD1-205ENST00000548277 TDHQ8IZJ6 230 aa14.56□□□□□ -0.08
TRAFD1-205ENST00000548277 MIER1Q8N108 512 aa14.56□□□□□ -0.08
TRAFD1-205ENST00000548277 NPLOC4Q8TAT6 608 aa14.56□□□□□ -0.08
TRAFD1-205ENST00000548277 ZNF512BQ96KM6 892 aaPredicted RBP14.56□□□□□ -0.08
TRAFD1-205ENST00000548277 APBA2Q99767 749 aa14.56□□□□□ -0.08
TRAFD1-205ENST00000548277 CABP5Q9NP86 173 aa14.56□□□□□ -0.08
TRAFD1-205ENST00000548277 BTBD7Q9P203 1132 aa14.56□□□□□ -0.08
TRAFD1-205ENST00000548277 SERPINB13Q9UIV8 391 aa14.56□□□□□ -0.08
TRAFD1-205ENST00000548277 EXOC6BQ9Y2D4 811 aa14.56□□□□□ -0.08
TRAFD1-205ENST00000548277 RABGAP1Q9Y3P9 1069 aa14.56□□□□□ -0.08
TRAFD1-205ENST00000548277 NAV1Q8NEY1 1877 aa14.56□□□□□ -0.08
TRAFD1-205ENST00000548277 APBB1O00213 710 aa14.55□□□□□ -0.08
TRAFD1-205ENST00000548277 MPHOSPH10O00566 681 aaKnown RBP14.55□□□□□ -0.08
TRAFD1-205ENST00000548277 MYCNP04198 464 aaPredicted RBP14.55□□□□□ -0.08
TRAFD1-205ENST00000548277 RLBP1P12271 317 aa14.55□□□□□ -0.08
TRAFD1-205ENST00000548277 ATN1P54259 1190 aaPredicted RBP14.55□□□□□ -0.08
TRAFD1-205ENST00000548277 CCNA1P78396 465 aa14.55□□□□□ -0.08
TRAFD1-205ENST00000548277 EVX2Q03828 476 aa14.55□□□□□ -0.08
TRAFD1-205ENST00000548277 MAP3K12Q12852 859 aa14.55□□□□□ -0.08
TRAFD1-205ENST00000548277 SEPT2Q15019 361 aa14.55□□□□□ -0.08
TRAFD1-205ENST00000548277 MFSD14CQ5VZR4 134 aa14.55□□□□□ -0.08
TRAFD1-205ENST00000548277 SAMD1Q6SPF0 538 aaPredicted RBP14.55□□□□□ -0.08
TRAFD1-205ENST00000548277 TTC6Q86TZ1 520 aa14.55□□□□□ -0.08
TRAFD1-205ENST00000548277 AACSQ86V21 672 aa14.55□□□□□ -0.08
TRAFD1-205ENST00000548277 GTF3C2Q8WUA4 911 aaPredicted RBP14.55□□□□□ -0.08
TRAFD1-205ENST00000548277 IL1RAPL2Q9NP60 686 aa14.55□□□□□ -0.08
TRAFD1-205ENST00000548277 NOP58Q9Y2X3 529 aaKnown RBP14.55□□□□□ -0.08
TRAFD1-205ENST00000548277 GLRX3O76003 335 aaKnown RBP14.54□□□□□ -0.08
TRAFD1-205ENST00000548277 COL6A1P12109 1028 aa14.54□□□□□ -0.08
TRAFD1-205ENST00000548277 VCAM1P19320 739 aa14.54□□□□□ -0.08
TRAFD1-205ENST00000548277 PTPREP23469 700 aa14.54□□□□□ -0.08
TRAFD1-205ENST00000548277 CYP2C19P33261 490 aa14.54□□□□□ -0.08
TRAFD1-205ENST00000548277 USP14P54578 494 aa14.54□□□□□ -0.08
TRAFD1-205ENST00000548277 ANO1Q5XXA6 986 aa14.54□□□□□ -0.08
TRAFD1-205ENST00000548277 DIEXFQ68CQ4 756 aaKnown RBP14.54□□□□□ -0.08
TRAFD1-205ENST00000548277 RPAP3Q9H6T3 665 aaPredicted RBP14.54□□□□□ -0.08
TRAFD1-205ENST00000548277 IVNS1ABPQ9Y6Y0 642 aa14.54□□□□□ -0.08
TRAFD1-205ENST00000548277 MAGEB6P1A0A0J9YX57 407 aa14.53□□□□□ -0.08
TRAFD1-205ENST00000548277 SLC15A5A6NIM6 579 aa14.53□□□□□ -0.08
TRAFD1-205ENST00000548277 GUCY1A2P33402 732 aa14.53□□□□□ -0.08
TRAFD1-205ENST00000548277 SHMT1P34896 483 aa14.53□□□□□ -0.08
TRAFD1-205ENST00000548277 LRIT3Q3SXY7 679 aa14.53□□□□□ -0.08
TRAFD1-205ENST00000548277 C12orf42Q96LP6 360 aa14.53□□□□□ -0.08
TRAFD1-205ENST00000548277 FAM161BQ96MY7 647 aa14.53□□□□□ -0.08
TRAFD1-205ENST00000548277 LAMA3Q16787 3333 aa14.53□□□□□ -0.08
TRAFD1-205ENST00000548277 COL11A1P12107 1806 aaPredicted RBP14.52□□□□□ -0.08
TRAFD1-205ENST00000548277 SPDYE16A6NNV3 312 aaPredicted RBP14.52□□□□□ -0.09
TRAFD1-205ENST00000548277 GJC2Q5T442 439 aaPredicted RBP14.52□□□□□ -0.09
TRAFD1-205ENST00000548277 DPP9Q86TI2 863 aa14.52□□□□□ -0.09
TRAFD1-205ENST00000548277 KIAA1683Q9H0B3 1180 aa14.52□□□□□ -0.09
TRAFD1-205ENST00000548277 MTMR10Q9NXD2 777 aa14.52□□□□□ -0.09
TRAFD1-205ENST00000548277 MCM9Q9NXL9 1143 aa14.52□□□□□ -0.09
TRAFD1-205ENST00000548277 DDX20Q9UHI6 824 aaKnown RBP14.52□□□□□ -0.09
TRAFD1-205ENST00000548277 RLFQ13129 1914 aa14.52□□□□□ -0.09
TRAFD1-205ENST00000548277 A0A1W2PRG0 241 aa14.51□□□□□ -0.09
TRAFD1-205ENST00000548277 CYP2D6P10635 497 aa14.51□□□□□ -0.09
TRAFD1-205ENST00000548277 HNRNPUQ00839 825 aaKnown RBP eCLIP14.51□□□□□ -0.09
TRAFD1-205ENST00000548277 PLS1Q14651 629 aa14.51□□□□□ -0.09
TRAFD1-205ENST00000548277 PRAMEF19Q5SWL8 479 aa14.51□□□□□ -0.09
TRAFD1-205ENST00000548277 SLC9C2Q5TAH2 1124 aa14.51□□□□□ -0.09
TRAFD1-205ENST00000548277 CEP85Q6P2H3 762 aa14.51□□□□□ -0.09
TRAFD1-205ENST00000548277 TRPV1Q8NER1 839 aa14.51□□□□□ -0.09
TRAFD1-205ENST00000548277 SDR42E1Q8WUS8 393 aa14.51□□□□□ -0.09
TRAFD1-205ENST00000548277 DNAJC2Q99543 621 aaKnown RBP14.51□□□□□ -0.09
TRAFD1-205ENST00000548277 LBHD1Q9BQE6 289 aaPredicted RBP14.51□□□□□ -0.09
TRAFD1-205ENST00000548277 TANGO6Q9C0B7 1094 aa14.51□□□□□ -0.09
TRAFD1-205ENST00000548277 EHD4Q9H223 541 aa14.51□□□□□ -0.09
TRAFD1-205ENST00000548277 COL6A3P12111 3177 aa14.51□□□□□ -0.09
TRAFD1-205ENST00000548277 COG2Q14746 738 aa14.5□□□□□ -0.09
TRAFD1-205ENST00000548277 SLFNL1Q499Z3 407 aa14.5□□□□□ -0.09
TRAFD1-205ENST00000548277 SLC44A5Q8NCS7 719 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms