RNA–Protein interactions for RNA: ENST00000548211.1

RPAP3-205, Transcript of RNA polymerase II associated protein 3, human

TSL 2

Gene RPAP3, Length 555 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPAP3-205	ENST00000548211	CCDC180	Q9P1Z9	1646 aa		6.94	□□□□□ -1.3
RPAP3-205	ENST00000548211	CTSH	P09668	335 aa		6.93	□□□□□ -1.3
RPAP3-205	ENST00000548211	C1QTNF9	P0C862	333 aa		6.93	□□□□□ -1.3
RPAP3-205	ENST00000548211	KIR3DL1	P43629	444 aa		6.93	□□□□□ -1.3
RPAP3-205	ENST00000548211	HK2	P52789	917 aa		6.93	□□□□□ -1.3
RPAP3-205	ENST00000548211	TSNAXIP1	Q2TAA8	658 aa		6.93	□□□□□ -1.3
RPAP3-205	ENST00000548211	C1QL4	Q86Z23	238 aa		6.93	□□□□□ -1.3
RPAP3-205	ENST00000548211	CREG2	Q8IUH2	290 aa		6.93	□□□□□ -1.3
RPAP3-205	ENST00000548211	NSUN3	Q9H649	340 aa	Known RBP	6.93	□□□□□ -1.3
RPAP3-205	ENST00000548211	TACC3	Q9Y6A5	838 aa		6.93	□□□□□ -1.3
RPAP3-205	ENST00000548211	TRHR	P34981	398 aa	Predicted RBP	6.92	□□□□□ -1.3
RPAP3-205	ENST00000548211	RPL6	Q02878	288 aa	Known RBP	6.92	□□□□□ -1.3
RPAP3-205	ENST00000548211	BNC2	Q6ZN30	1099 aa	Predicted RBP	6.92	□□□□□ -1.3
RPAP3-205	ENST00000548211	PHC3	Q8NDX5	983 aa		6.92	□□□□□ -1.3
RPAP3-205	ENST00000548211	BHLHE22	Q8NFJ8	381 aa	Predicted RBP	6.92	□□□□□ -1.3
RPAP3-205	ENST00000548211	CEP131	Q9UPN4	1083 aa		6.92	□□□□□ -1.3
RPAP3-205	ENST00000548211	LRRN2	O75325	713 aa		6.91	□□□□□ -1.3
RPAP3-205	ENST00000548211	TSPAN15	O95858	294 aa		6.91	□□□□□ -1.3
RPAP3-205	ENST00000548211	TPP2	P29144	1249 aa	Predicted RBP	6.91	□□□□□ -1.3
RPAP3-205	ENST00000548211	ETV3	P41162	512 aa		6.91	□□□□□ -1.3
RPAP3-205	ENST00000548211	LCNL1	Q6ZST4	164 aa		6.91	□□□□□ -1.3
RPAP3-205	ENST00000548211	ABHD4	Q8TB40	342 aa		6.91	□□□□□ -1.3
RPAP3-205	ENST00000548211	PLCG1	P19174	1290 aa		6.9	□□□□□ -1.3
RPAP3-205	ENST00000548211	PDE4B	Q07343	736 aa		6.9	□□□□□ -1.3
RPAP3-205	ENST00000548211	TAF1C	Q15572	869 aa	Predicted RBP	6.9	□□□□□ -1.3
RPAP3-205	ENST00000548211	GAB4	Q2WGN9	574 aa		6.9	□□□□□ -1.3
RPAP3-205	ENST00000548211	TMPRSS7	Q7RTY8	843 aa		6.9	□□□□□ -1.3
RPAP3-205	ENST00000548211	PIWIL2	Q8TC59	973 aa	Known RBP	6.9	□□□□□ -1.3
RPAP3-205	ENST00000548211	COX4I2	Q96KJ9	171 aa		6.9	□□□□□ -1.3
RPAP3-205	ENST00000548211	KRTAP4-9	Q9BYQ8	210 aa		6.9	□□□□□ -1.3
RPAP3-205	ENST00000548211	TMEM59L	Q9UK28	342 aa		6.9	□□□□□ -1.3
RPAP3-205	ENST00000548211	SRF	P11831	508 aa		6.89	□□□□□ -1.31
RPAP3-205	ENST00000548211	DAB2	P98082	770 aa		6.89	□□□□□ -1.31
RPAP3-205	ENST00000548211	TAGLN	Q01995	201 aa	Known RBP	6.89	□□□□□ -1.31
RPAP3-205	ENST00000548211	PSMD2	Q13200	908 aa		6.89	□□□□□ -1.31
RPAP3-205	ENST00000548211	DTWD2	Q8NBA8	298 aa		6.89	□□□□□ -1.31
RPAP3-205	ENST00000548211	FBXO15	Q8NCQ5	510 aa	Predicted RBP	6.89	□□□□□ -1.31
RPAP3-205	ENST00000548211	FAM13C	Q8NE31	585 aa		6.89	□□□□□ -1.31
RPAP3-205	ENST00000548211	MYLIP	Q8WY64	445 aa		6.89	□□□□□ -1.31
RPAP3-205	ENST00000548211	C19orf44	Q9H6X5	657 aa		6.89	□□□□□ -1.31
RPAP3-205	ENST00000548211	SP110	Q9HB58	689 aa		6.89	□□□□□ -1.31
RPAP3-205	ENST00000548211	ADAM30	Q9UKF2	790 aa		6.89	□□□□□ -1.31
RPAP3-205	ENST00000548211	FAM221A	A4D161	298 aa		6.88	□□□□□ -1.31
RPAP3-205	ENST00000548211	KRTAP9-7	A8MTY7	169 aa		6.88	□□□□□ -1.31
RPAP3-205	ENST00000548211	CILP	O75339	1184 aa		6.88	□□□□□ -1.31
RPAP3-205	ENST00000548211	F13A1	P00488	732 aa		6.88	□□□□□ -1.31
RPAP3-205	ENST00000548211	LRRC56	Q8IYG6	542 aa	Predicted RBP	6.88	□□□□□ -1.31
RPAP3-205	ENST00000548211	PPP1R16B	Q96T49	567 aa		6.88	□□□□□ -1.31
RPAP3-205	ENST00000548211	NOC4L	Q9BVI4	516 aa	Known RBP	6.88	□□□□□ -1.31
RPAP3-205	ENST00000548211	USP31	Q70CQ4	1352 aa		6.87	□□□□□ -1.31
RPAP3-205	ENST00000548211	PF4	P02776	101 aa		6.87	□□□□□ -1.31
RPAP3-205	ENST00000548211	HPX	P02790	462 aa		6.87	□□□□□ -1.31
RPAP3-205	ENST00000548211	RAC2	P15153	192 aa		6.87	□□□□□ -1.31
RPAP3-205	ENST00000548211	EGR3	Q06889	387 aa		6.87	□□□□□ -1.31
RPAP3-205	ENST00000548211	CAMK2G	Q13555	558 aa	Predicted RBP	6.87	□□□□□ -1.31
RPAP3-205	ENST00000548211	TIGD5	Q53EQ6	642 aa		6.87	□□□□□ -1.31
RPAP3-205	ENST00000548211	SND1	Q7KZF4	910 aa	Known RBP eCLIP	6.87	□□□□□ -1.31
RPAP3-205	ENST00000548211	ANKLE2	Q86XL3	938 aa		6.87	□□□□□ -1.31
RPAP3-205	ENST00000548211	CYB5D2	Q8WUJ1	264 aa		6.87	□□□□□ -1.31
RPAP3-205	ENST00000548211	CCDC120	Q96HB5	630 aa		6.87	□□□□□ -1.31
RPAP3-205	ENST00000548211	TOX2	Q96NM4	488 aa		6.87	□□□□□ -1.31
RPAP3-205	ENST00000548211	DCP1A	Q9NPI6	582 aa	Predicted RBP	6.87	□□□□□ -1.31
RPAP3-205	ENST00000548211	DUSP13	Q9UII6	198 aa		6.87	□□□□□ -1.31
RPAP3-205	ENST00000548211	CHURC1-FNTB	B4DL54	471 aa		6.86	□□□□□ -1.31
RPAP3-205	ENST00000548211	NPIPB6	E9PJ23	425 aa		6.86	□□□□□ -1.31
RPAP3-205	ENST00000548211	GRIN3B	O60391	1043 aa		6.86	□□□□□ -1.31
RPAP3-205	ENST00000548211	ST13	P50502	369 aa	Known RBP	6.86	□□□□□ -1.31
RPAP3-205	ENST00000548211	DNAJC14	Q6Y2X3	702 aa	Predicted RBP	6.86	□□□□□ -1.31
RPAP3-205	ENST00000548211	TSPYL5	Q86VY4	417 aa	Predicted RBP	6.86	□□□□□ -1.31
RPAP3-205	ENST00000548211	GPR62	Q9BZJ7	368 aa		6.86	□□□□□ -1.31
RPAP3-205	ENST00000548211	RNF32	Q9H0A6	362 aa		6.86	□□□□□ -1.31
RPAP3-205	ENST00000548211	EBF1	Q9UH73	591 aa		6.86	□□□□□ -1.31
RPAP3-205	ENST00000548211	SHISA3	A0PJX4	238 aa		6.85	□□□□□ -1.31
RPAP3-205	ENST00000548211	NFIB	O00712	420 aa		6.85	□□□□□ -1.31
RPAP3-205	ENST00000548211	DNAJA2	O60884	412 aa		6.85	□□□□□ -1.31
RPAP3-205	ENST00000548211	ZGLP1	P0C6A0	271 aa		6.85	□□□□□ -1.31
RPAP3-205	ENST00000548211	RLBP1	P12271	317 aa		6.85	□□□□□ -1.31
RPAP3-205	ENST00000548211	TMEM201	Q5SNT2	666 aa		6.85	□□□□□ -1.31
RPAP3-205	ENST00000548211	TMC4	Q7Z404	712 aa		6.85	□□□□□ -1.31
RPAP3-205	ENST00000548211	AEBP1	Q8IUX7	1158 aa		6.85	□□□□□ -1.31
RPAP3-205	ENST00000548211	BAHD1	Q8TBE0	780 aa	Predicted RBP	6.85	□□□□□ -1.31
RPAP3-205	ENST00000548211	GATAD2B	Q8WXI9	593 aa		6.85	□□□□□ -1.31
RPAP3-205	ENST00000548211	EPB41L4B	Q9H329	900 aa		6.85	□□□□□ -1.31
RPAP3-205	ENST00000548211	TRIT1	Q9H3H1	467 aa	Known RBP	6.85	□□□□□ -1.31
RPAP3-205	ENST00000548211	GPATCH2	Q9NW75	528 aa		6.85	□□□□□ -1.31
RPAP3-205	ENST00000548211	REV1	Q9UBZ9	1251 aa		6.85	□□□□□ -1.31
RPAP3-205	ENST00000548211	KLHL3	Q9UH77	587 aa		6.85	□□□□□ -1.31
RPAP3-205	ENST00000548211	POLR3K	Q9Y2Y1	108 aa	Predicted RBP	6.85	□□□□□ -1.31
RPAP3-205	ENST00000548211	PCDHA11	Q9Y5I1	949 aa		6.85	□□□□□ -1.31
RPAP3-205	ENST00000548211	ETV2	O00321	342 aa	Predicted RBP	6.84	□□□□□ -1.31
RPAP3-205	ENST00000548211	BPNT1	O95861	308 aa		6.84	□□□□□ -1.31
RPAP3-205	ENST00000548211	TMEM253	P0C7T8	217 aa		6.84	□□□□□ -1.31
RPAP3-205	ENST00000548211	ZSCAN22	P10073	491 aa	Predicted RBP	6.84	□□□□□ -1.31
RPAP3-205	ENST00000548211	XPC	Q01831	940 aa	Predicted RBP	6.84	□□□□□ -1.31
RPAP3-205	ENST00000548211	LMNB2	Q03252	620 aa		6.84	□□□□□ -1.31
RPAP3-205	ENST00000548211	FAM160A1	Q05DH4	1040 aa		6.84	□□□□□ -1.31
RPAP3-205	ENST00000548211	KRTAP19-4	Q3LI73	84 aa		6.84	□□□□□ -1.31
RPAP3-205	ENST00000548211	ATG14	Q6ZNE5	492 aa		6.84	□□□□□ -1.31
RPAP3-205	ENST00000548211	CCDC84	Q86UT8	332 aa	Predicted RBP	6.84	□□□□□ -1.31
RPAP3-205	ENST00000548211	FBXO27	Q8NI29	283 aa		6.84	□□□□□ -1.31

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