RNA–Protein interactions for RNA: ENST00000548116.5

SMPDL3B-205, Transcript of sphingomyelin phosphodiesterase acid like 3B, humanhuman

TSL 2

Gene SMPDL3B, Length 1,913 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3B-205ENST00000548116 PLEKHA8P1O95397 391 aa15.84■□□□□ 0.13
SMPDL3B-205ENST00000548116 HLA-DOAP06340 250 aa15.84■□□□□ 0.13
SMPDL3B-205ENST00000548116 TMTC3Q6ZXV5 915 aa15.84■□□□□ 0.13
SMPDL3B-205ENST00000548116 CCDC82Q8N4S0 544 aa15.84■□□□□ 0.13
SMPDL3B-205ENST00000548116 TMEM47Q9BQJ4 181 aa15.84■□□□□ 0.13
SMPDL3B-205ENST00000548116 DHX36Q9H2U1 1008 aaKnown RBP15.84■□□□□ 0.13
SMPDL3B-205ENST00000548116 KAT14Q9H8E8 782 aa15.84■□□□□ 0.13
SMPDL3B-205ENST00000548116 HDAC9Q9UKV0 1011 aa15.84■□□□□ 0.13
SMPDL3B-205ENST00000548116 DDX49Q9Y6V7 483 aaKnown RBP15.84■□□□□ 0.13
SMPDL3B-205ENST00000548116 IGKV6D-41A0A0C4DH26 115 aa15.83■□□□□ 0.12
SMPDL3B-205ENST00000548116 FIBPO43427 364 aa15.83■□□□□ 0.12
SMPDL3B-205ENST00000548116 GADD45BO75293 160 aaPredicted RBP15.83■□□□□ 0.12
SMPDL3B-205ENST00000548116 ENTPD3O75355 529 aa15.83■□□□□ 0.12
SMPDL3B-205ENST00000548116 AKR1B1P15121 316 aa15.83■□□□□ 0.12
SMPDL3B-205ENST00000548116 NCLP19338 710 aaKnown RBP15.83■□□□□ 0.12
SMPDL3B-205ENST00000548116 OGFOD1Q8N543 542 aa15.83■□□□□ 0.12
SMPDL3B-205ENST00000548116 MTMR14Q8NCE2 650 aa15.83■□□□□ 0.12
SMPDL3B-205ENST00000548116 PNMA1Q8ND90 353 aa15.83■□□□□ 0.12
SMPDL3B-205ENST00000548116 CEP95Q96GE4 821 aa15.83■□□□□ 0.12
SMPDL3B-205ENST00000548116 ATRNL1Q5VV63 1379 aa15.83■□□□□ 0.12
SMPDL3B-205ENST00000548116 GREB1LQ9C091 1923 aaPredicted RBP15.82■□□□□ 0.12
SMPDL3B-205ENST00000548116 DLGAP5Q15398 846 aa15.82■□□□□ 0.12
SMPDL3B-205ENST00000548116 ZBED3Q96IU2 234 aaPredicted RBP15.82■□□□□ 0.12
SMPDL3B-205ENST00000548116 MAP3K14Q99558 947 aa15.82■□□□□ 0.12
SMPDL3B-205ENST00000548116 RNF26Q9BY78 433 aaPredicted RBP15.82■□□□□ 0.12
SMPDL3B-205ENST00000548116 MYH6P13533 1939 aa15.82■□□□□ 0.12
SMPDL3B-205ENST00000548116 COL2A1P02458 1487 aaPredicted RBP15.82■□□□□ 0.12
SMPDL3B-205ENST00000548116 KRT85P78386 507 aa15.82■□□□□ 0.12
SMPDL3B-205ENST00000548116 KRT40Q6A162 431 aa15.82■□□□□ 0.12
SMPDL3B-205ENST00000548116 METTL16Q86W50 562 aaKnown RBP15.82■□□□□ 0.12
SMPDL3B-205ENST00000548116 TRIM22Q8IYM9 498 aa15.82■□□□□ 0.12
SMPDL3B-205ENST00000548116 SRBD1Q8N5C6 995 aaKnown RBP15.82■□□□□ 0.12
SMPDL3B-205ENST00000548116 CTCFLQ8NI51 663 aaPredicted RBP15.82■□□□□ 0.12
SMPDL3B-205ENST00000548116 TFIP11Q9UBB9 837 aaKnown RBP15.82■□□□□ 0.12
SMPDL3B-205ENST00000548116 PI4KBQ9UBF8 816 aa15.82■□□□□ 0.12
SMPDL3B-205ENST00000548116 ZNF70Q9UC06 446 aaPredicted RBP15.82■□□□□ 0.12
SMPDL3B-205ENST00000548116 STX8Q9UNK0 236 aa15.82■□□□□ 0.12
SMPDL3B-205ENST00000548116 CNTNAP5Q8WYK1 1306 aa15.81■□□□□ 0.12
SMPDL3B-205ENST00000548116 SHTN1A0MZ66 631 aa15.81■□□□□ 0.12
SMPDL3B-205ENST00000548116 FZD9O00144 591 aa15.81■□□□□ 0.12
SMPDL3B-205ENST00000548116 DEXIO95424 95 aa15.81■□□□□ 0.12
SMPDL3B-205ENST00000548116 KIF23Q02241 960 aaPredicted RBP15.81■□□□□ 0.12
SMPDL3B-205ENST00000548116 GRM4Q14833 912 aa15.81■□□□□ 0.12
SMPDL3B-205ENST00000548116 TNIP1Q15025 636 aa15.81■□□□□ 0.12
SMPDL3B-205ENST00000548116 PKN1Q16512 942 aa15.81■□□□□ 0.12
SMPDL3B-205ENST00000548116 SPDYE2Q495Y8 402 aa15.81■□□□□ 0.12
SMPDL3B-205ENST00000548116 WASF1Q92558 559 aa15.81■□□□□ 0.12
SMPDL3B-205ENST00000548116 GZF1Q9H116 711 aaPredicted RBP15.81■□□□□ 0.12
SMPDL3B-205ENST00000548116 CLRN2A0PK11 232 aa15.8■□□□□ 0.12
SMPDL3B-205ENST00000548116 KIF28PB7ZC32 967 aa15.8■□□□□ 0.12
SMPDL3B-205ENST00000548116 PRPF3O43395 683 aaKnown RBP15.8■□□□□ 0.12
SMPDL3B-205ENST00000548116 FHDC1Q9C0D6 1143 aaPredicted RBP15.8■□□□□ 0.12
SMPDL3B-205ENST00000548116 MTMR4Q9NYA4 1195 aa15.8■□□□□ 0.12
SMPDL3B-205ENST00000548116 FAM196BA6NMK8 535 aa15.8■□□□□ 0.12
SMPDL3B-205ENST00000548116 GSE1Q14687 1217 aa15.8■□□□□ 0.12
SMPDL3B-205ENST00000548116 FOXP4Q8IVH2 680 aaPredicted RBP15.8■□□□□ 0.12
SMPDL3B-205ENST00000548116 ZSCAN29Q8IWY8 852 aaPredicted RBP15.8■□□□□ 0.12
SMPDL3B-205ENST00000548116 SHISA4Q96DD7 197 aa15.8■□□□□ 0.12
SMPDL3B-205ENST00000548116 MAD2L2Q9UI95 211 aa15.8■□□□□ 0.12
SMPDL3B-205ENST00000548116 TAOK2Q9UL54 1235 aa15.8■□□□□ 0.12
SMPDL3B-205ENST00000548116 CNTNAP1P78357 1384 aa15.8■□□□□ 0.12
SMPDL3B-205ENST00000548116 BAZ2BQ9UIF8 2168 aaKnown RBP15.79■□□□□ 0.12
SMPDL3B-205ENST00000548116 TCP10L2B9ZVM9 353 aa15.79■□□□□ 0.12
SMPDL3B-205ENST00000548116 TOP1P11387 765 aaKnown RBP15.79■□□□□ 0.12
SMPDL3B-205ENST00000548116 KIF5BP33176 963 aa15.79■□□□□ 0.12
SMPDL3B-205ENST00000548116 ZNF280AP59817 542 aaPredicted RBP15.79■□□□□ 0.12
SMPDL3B-205ENST00000548116 TATDN1Q6P1N9 297 aa15.79■□□□□ 0.12
SMPDL3B-205ENST00000548116 STAG2Q8N3U4 1231 aa15.79■□□□□ 0.12
SMPDL3B-205ENST00000548116 LEO1Q8WVC0 666 aaPredicted RBP15.79■□□□□ 0.12
SMPDL3B-205ENST00000548116 V9GY48 417 aaPredicted RBP15.79■□□□□ 0.12
SMPDL3B-205ENST00000548116 ELP1O95163 1332 aa15.79■□□□□ 0.12
SMPDL3B-205ENST00000548116 hCG_1642624A0A1W2PR95 340 aa15.78■□□□□ 0.12
SMPDL3B-205ENST00000548116 MBD3O95983 291 aa15.78■□□□□ 0.12
SMPDL3B-205ENST00000548116 RPS12P25398 132 aaKnown RBP15.78■□□□□ 0.12
SMPDL3B-205ENST00000548116 CSPP1Q1MSJ5 1256 aa15.78■□□□□ 0.12
SMPDL3B-205ENST00000548116 SLC35G1Q2M3R5 365 aa15.78■□□□□ 0.12
SMPDL3B-205ENST00000548116 RASGRP2Q7LDG7 609 aa15.78■□□□□ 0.12
SMPDL3B-205ENST00000548116 CLEC10AQ8IUN9 316 aa15.78■□□□□ 0.12
SMPDL3B-205ENST00000548116 SCAND2PQ9GZW5 306 aaPredicted RBP15.78■□□□□ 0.12
SMPDL3B-205ENST00000548116 MYOZ2Q9NPC6 264 aa15.78■□□□□ 0.12
SMPDL3B-205ENST00000548116 TMOD2Q9NZR1 351 aa15.78■□□□□ 0.12
SMPDL3B-205ENST00000548116 PALM3A6NDB9 673 aaPredicted RBP15.78■□□□□ 0.12
SMPDL3B-205ENST00000548116 WNT10BO00744 389 aa15.78■□□□□ 0.12
SMPDL3B-205ENST00000548116 UBE2HP62256 183 aa15.78■□□□□ 0.12
SMPDL3B-205ENST00000548116 FKBP1CQ5VVH2 108 aa15.78■□□□□ 0.12
SMPDL3B-205ENST00000548116 ILDR2Q71H61 639 aa15.78■□□□□ 0.12
SMPDL3B-205ENST00000548116 BRAPQ7Z569 592 aa15.78■□□□□ 0.12
SMPDL3B-205ENST00000548116 FAM151AQ8WW52 585 aa15.78■□□□□ 0.12
SMPDL3B-205ENST00000548116 CCDC17Q96LX7 622 aa15.78■□□□□ 0.12
SMPDL3B-205ENST00000548116 FTOQ9C0B1 505 aaKnown RBP eCLIP15.78■□□□□ 0.12
SMPDL3B-205ENST00000548116 U2AF2P26368 475 aaKnown RBP eCLIP15.77■□□□□ 0.12
SMPDL3B-205ENST00000548116 TRIM29Q14134 588 aa15.77■□□□□ 0.12
SMPDL3B-205ENST00000548116 SHROOM1Q2M3G4 852 aaPredicted RBP15.77■□□□□ 0.12
SMPDL3B-205ENST00000548116 NBPF9Q3BBW0 867 aa15.77■□□□□ 0.12
SMPDL3B-205ENST00000548116 ATL3Q6DD88 541 aa15.77■□□□□ 0.12
SMPDL3B-205ENST00000548116 SPATA32Q96LK8 384 aa15.77■□□□□ 0.12
SMPDL3B-205ENST00000548116 USP28Q96RU2 1077 aa15.77■□□□□ 0.12
SMPDL3B-205ENST00000548116 RBM27Q9P2N5 1060 aaKnown RBP15.77■□□□□ 0.12
SMPDL3B-205ENST00000548116 KCNJ14Q9UNX9 436 aa15.77■□□□□ 0.12
SMPDL3B-205ENST00000548116 ZNF541Q9H0D2 1346 aa15.77■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms