RNA–Protein interactions for RNA: ENST00000547967.5

RNF41-203, Transcript of ring finger protein 41, humanhuman

TSL 1 (best)

Gene RNF41, Length 2,552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41-203ENST00000547967 LUZP1Q86V48 1076 aa13.59□□□□□ -0.23
RNF41-203ENST00000547967 MAP3K14Q99558 947 aa13.59□□□□□ -0.23
RNF41-203ENST00000547967 CABP5Q9NP86 173 aa13.59□□□□□ -0.23
RNF41-203ENST00000547967 ECM29Q5VYK3 1845 aa13.58□□□□□ -0.23
RNF41-203ENST00000547967 TOB1P50616 345 aaPredicted RBP13.58□□□□□ -0.24
RNF41-203ENST00000547967 AXDND1Q5T1B0 1012 aaPredicted RBP13.58□□□□□ -0.24
RNF41-203ENST00000547967 RBM43Q6ZSC3 357 aaKnown RBP13.58□□□□□ -0.24
RNF41-203ENST00000547967 FMR1NBQ8N0W7 255 aaPredicted RBP13.58□□□□□ -0.24
RNF41-203ENST00000547967 STAG2Q8N3U4 1231 aa13.58□□□□□ -0.24
RNF41-203ENST00000547967 RGS22Q8NE09 1264 aa13.58□□□□□ -0.24
RNF41-203ENST00000547967 EYA3Q99504 573 aa13.58□□□□□ -0.24
RNF41-203ENST00000547967 DNAJC25Q9H1X3 360 aa13.58□□□□□ -0.24
RNF41-203ENST00000547967 LRRC37AA6NMS7 1700 aa13.58□□□□□ -0.24
RNF41-203ENST00000547967 COL11A2P13942 1736 aaPredicted RBP13.58□□□□□ -0.24
RNF41-203ENST00000547967 LTBP1Q14766 1721 aa13.58□□□□□ -0.24
RNF41-203ENST00000547967 NRXN2Q9P2S2 1712 aa13.58□□□□□ -0.24
RNF41-203ENST00000547967 LAMB1P07942 1786 aa13.58□□□□□ -0.24
RNF41-203ENST00000547967 A0A1W2PQ27 194 aa13.58□□□□□ -0.24
RNF41-203ENST00000547967 A0A1W2PQ64 194 aa13.58□□□□□ -0.24
RNF41-203ENST00000547967 A0A1W2PQD8 194 aa13.58□□□□□ -0.24
RNF41-203ENST00000547967 FAM205CA6NFA0 338 aa13.58□□□□□ -0.24
RNF41-203ENST00000547967 XBP1P17861 261 aa13.58□□□□□ -0.24
RNF41-203ENST00000547967 PTPAQ15257 358 aa13.58□□□□□ -0.24
RNF41-203ENST00000547967 DGKHQ86XP1 1220 aa13.58□□□□□ -0.24
RNF41-203ENST00000547967 CERS3Q8IU89 383 aa13.58□□□□□ -0.24
RNF41-203ENST00000547967 KIAA0825Q8IV33 1275 aa13.58□□□□□ -0.24
RNF41-203ENST00000547967 FOXP1Q9H334 677 aaPredicted RBP13.58□□□□□ -0.24
RNF41-203ENST00000547967 SPECC1Q5M775 1068 aa13.57□□□□□ -0.24
RNF41-203ENST00000547967 RASGRP2Q7LDG7 609 aa13.57□□□□□ -0.24
RNF41-203ENST00000547967 FAM43AQ8N2R8 423 aa13.57□□□□□ -0.24
RNF41-203ENST00000547967 DDX4Q9NQI0 724 aaKnown RBP13.57□□□□□ -0.24
RNF41-203ENST00000547967 USP40Q9NVE5 1235 aa13.57□□□□□ -0.24
RNF41-203ENST00000547967 TNS1Q9HBL0 1735 aaKnown RBP13.57□□□□□ -0.24
RNF41-203ENST00000547967 CNTNAP5Q8WYK1 1306 aa13.57□□□□□ -0.24
RNF41-203ENST00000547967 PFKFB1P16118 471 aa13.57□□□□□ -0.24
RNF41-203ENST00000547967 UVSSAQ2YD98 709 aa13.57□□□□□ -0.24
RNF41-203ENST00000547967 C16orf86Q6ZW13 317 aa13.57□□□□□ -0.24
RNF41-203ENST00000547967 ZNF287Q9HBT7 754 aa13.57□□□□□ -0.24
RNF41-203ENST00000547967 PCDHB6Q9Y5E3 794 aa13.57□□□□□ -0.24
RNF41-203ENST00000547967 PCDHAC2Q9Y5I4 1007 aa13.57□□□□□ -0.24
RNF41-203ENST00000547967 MYH6P13533 1939 aa13.56□□□□□ -0.24
RNF41-203ENST00000547967 ROBO3Q96MS0 1386 aa13.56□□□□□ -0.24
RNF41-203ENST00000547967 ESPNB1AK53 854 aa13.56□□□□□ -0.24
RNF41-203ENST00000547967 ZNF202O95125 648 aa13.56□□□□□ -0.24
RNF41-203ENST00000547967 ADCY5O95622 1261 aa13.56□□□□□ -0.24
RNF41-203ENST00000547967 GOLGA8HP0CJ92 632 aa13.56□□□□□ -0.24
RNF41-203ENST00000547967 KIF5BP33176 963 aa13.56□□□□□ -0.24
RNF41-203ENST00000547967 EARS2Q5JPH6 523 aaKnown RBP13.56□□□□□ -0.24
RNF41-203ENST00000547967 STYK1Q6J9G0 422 aa13.56□□□□□ -0.24
RNF41-203ENST00000547967 FAM200AQ8TCP9 573 aa13.56□□□□□ -0.24
RNF41-203ENST00000547967 TMEM47Q9BQJ4 181 aa13.56□□□□□ -0.24
RNF41-203ENST00000547967 CMA1P23946 247 aa13.56□□□□□ -0.24
RNF41-203ENST00000547967 RBM5P52756 815 aaKnown RBP eCLIP13.56□□□□□ -0.24
RNF41-203ENST00000547967 CACNB3P54284 484 aa13.56□□□□□ -0.24
RNF41-203ENST00000547967 AOC3Q16853 763 aa13.56□□□□□ -0.24
RNF41-203ENST00000547967 NOM1Q5C9Z4 860 aaKnown RBP13.56□□□□□ -0.24
RNF41-203ENST00000547967 PODNQ7Z5L7 613 aa13.56□□□□□ -0.24
RNF41-203ENST00000547967 JMYQ8N9B5 988 aa13.56□□□□□ -0.24
RNF41-203ENST00000547967 PHF20Q9BVI0 1012 aa13.56□□□□□ -0.24
RNF41-203ENST00000547967 CBX8Q9HC52 389 aa13.56□□□□□ -0.24
RNF41-203ENST00000547967 SLX4Q8IY92 1834 aa13.55□□□□□ -0.24
RNF41-203ENST00000547967 AP5Z1O43299 807 aa13.55□□□□□ -0.24
RNF41-203ENST00000547967 SLURP2P0DP57 97 aa13.55□□□□□ -0.24
RNF41-203ENST00000547967 ZNF165P49910 485 aa13.55□□□□□ -0.24
RNF41-203ENST00000547967 SHC4Q6S5L8 630 aa13.55□□□□□ -0.24
RNF41-203ENST00000547967 CNKSR1Q969H4 720 aa13.55□□□□□ -0.24
RNF41-203ENST00000547967 TEKT1Q969V4 418 aa13.55□□□□□ -0.24
RNF41-203ENST00000547967 CPVLQ9H3G5 476 aa13.55□□□□□ -0.24
RNF41-203ENST00000547967 NAV1Q8NEY1 1877 aa13.55□□□□□ -0.24
RNF41-203ENST00000547967 CTAGE5O15320 804 aa13.55□□□□□ -0.24
RNF41-203ENST00000547967 C21orf2O43822 256 aa13.55□□□□□ -0.24
RNF41-203ENST00000547967 ECE2O60344 883 aa13.55□□□□□ -0.24
RNF41-203ENST00000547967 PPP6R2O75170 966 aa13.55□□□□□ -0.24
RNF41-203ENST00000547967 PTMAP06454 111 aaKnown RBP13.55□□□□□ -0.24
RNF41-203ENST00000547967 KRT2P35908 639 aa13.55□□□□□ -0.24
RNF41-203ENST00000547967 GRIN1Q05586 938 aa13.55□□□□□ -0.24
RNF41-203ENST00000547967 SF3B2Q13435 895 aaKnown RBP13.55□□□□□ -0.24
RNF41-203ENST00000547967 RILPL1Q5EBL4 403 aa13.55□□□□□ -0.24
RNF41-203ENST00000547967 CDC42EP5Q6NZY7 148 aa13.55□□□□□ -0.24
RNF41-203ENST00000547967 GPKOWQ92917 476 aaPredicted RBP eCLIP13.55□□□□□ -0.24
RNF41-203ENST00000547967 CEP95Q96GE4 821 aa13.55□□□□□ -0.24
RNF41-203ENST00000547967 SUGT1Q9Y2Z0 365 aa13.55□□□□□ -0.24
RNF41-203ENST00000547967 SCG2P13521 617 aa13.54□□□□□ -0.24
RNF41-203ENST00000547967 EIF6P56537 245 aaKnown RBP13.54□□□□□ -0.24
RNF41-203ENST00000547967 NLRP5P59047 1200 aa13.54□□□□□ -0.24
RNF41-203ENST00000547967 NFIAQ12857 509 aa13.54□□□□□ -0.24
RNF41-203ENST00000547967 APOBEC3HQ6NTF7 200 aaKnown RBP13.54□□□□□ -0.24
RNF41-203ENST00000547967 MAD2L2Q9UI95 211 aa13.54□□□□□ -0.24
RNF41-203ENST00000547967 CDK5RAP2Q96SN8 1893 aa13.54□□□□□ -0.24
RNF41-203ENST00000547967 ADAMTS3O15072 1205 aa13.54□□□□□ -0.24
RNF41-203ENST00000547967 SYKP43405 635 aa13.54□□□□□ -0.24
RNF41-203ENST00000547967 TCP10Q12799 353 aa13.54□□□□□ -0.24
RNF41-203ENST00000547967 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.54□□□□□ -0.24
RNF41-203ENST00000547967 TCP11L1Q9NUJ3 509 aa13.54□□□□□ -0.24
RNF41-203ENST00000547967 BIN1O00499 593 aa13.53□□□□□ -0.24
RNF41-203ENST00000547967 CRKP46108 304 aa13.53□□□□□ -0.24
RNF41-203ENST00000547967 C11orf57Q6ZUT1 292 aaPredicted RBP13.53□□□□□ -0.24
RNF41-203ENST00000547967 CLEC10AQ8IUN9 316 aa13.53□□□□□ -0.24
RNF41-203ENST00000547967 KRI1Q8N9T8 703 aaKnown RBP13.53□□□□□ -0.24
RNF41-203ENST00000547967 NEDD1Q8NHV4 660 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms