RNA–Protein interactions for RNA: ENST00000547758.1

CCDC59-202, Transcript of coiled-coil domain containing 59, humanhuman

TSL 2

Gene CCDC59, Length 553 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-202ENST00000547758 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.59■□□□□ 0.25
CCDC59-202ENST00000547758 MUC3AQ02505 3323 aa16.59■□□□□ 0.25
CCDC59-202ENST00000547758 MSCO60682 206 aa16.58■□□□□ 0.24
CCDC59-202ENST00000547758 GLRX3O76003 335 aaKnown RBP16.58■□□□□ 0.24
CCDC59-202ENST00000547758 RTP1P59025 263 aa16.58■□□□□ 0.24
CCDC59-202ENST00000547758 GORABQ5T7V8 394 aa16.58■□□□□ 0.24
CCDC59-202ENST00000547758 METTL16Q86W50 562 aaKnown RBP16.58■□□□□ 0.24
CCDC59-202ENST00000547758 CRACR2BQ8N4Y2 399 aaPredicted RBP16.58■□□□□ 0.24
CCDC59-202ENST00000547758 MAFAQ8NHW3 353 aaPredicted RBP16.58■□□□□ 0.24
CCDC59-202ENST00000547758 LPAR1Q92633 364 aa16.58■□□□□ 0.24
CCDC59-202ENST00000547758 MEIS3Q99687 375 aa16.58■□□□□ 0.24
CCDC59-202ENST00000547758 EMILIN3Q9NT22 766 aa16.58■□□□□ 0.24
CCDC59-202ENST00000547758 AATFQ9NY61 560 aaKnown RBP eCLIP16.58■□□□□ 0.24
CCDC59-202ENST00000547758 LRP2BPQ9P2M1 347 aa16.58■□□□□ 0.24
CCDC59-202ENST00000547758 FLT1P17948 1338 aa16.58■□□□□ 0.24
CCDC59-202ENST00000547758 ZNF236Q9UL36 1845 aa16.57■□□□□ 0.24
CCDC59-202ENST00000547758 DNM1LO00429 736 aa16.57■□□□□ 0.24
CCDC59-202ENST00000547758 SRGAP3O43295 1099 aa16.57■□□□□ 0.24
CCDC59-202ENST00000547758 BAG3O95817 575 aa16.57■□□□□ 0.24
CCDC59-202ENST00000547758 PLCG2P16885 1265 aa16.57■□□□□ 0.24
CCDC59-202ENST00000547758 MCAMP43121 646 aa16.57■□□□□ 0.24
CCDC59-202ENST00000547758 CCNA1P78396 465 aa16.57■□□□□ 0.24
CCDC59-202ENST00000547758 ASTLQ6HA08 431 aaPredicted RBP16.57■□□□□ 0.24
CCDC59-202ENST00000547758 USP17L2Q6R6M4 530 aa16.57■□□□□ 0.24
CCDC59-202ENST00000547758 FOXP4Q8IVH2 680 aaPredicted RBP16.57■□□□□ 0.24
CCDC59-202ENST00000547758 MAPKAPK5Q8IW41 473 aa16.57■□□□□ 0.24
CCDC59-202ENST00000547758 TGFBRAP1Q8WUH2 860 aa16.57■□□□□ 0.24
CCDC59-202ENST00000547758 RABGAP1Q9Y3P9 1069 aa16.57■□□□□ 0.24
CCDC59-202ENST00000547758 NDUFB9Q9Y6M9 179 aa16.57■□□□□ 0.24
CCDC59-202ENST00000547758 SLC15A5A6NIM6 579 aa16.56■□□□□ 0.24
CCDC59-202ENST00000547758 CNMDO75829 334 aa16.56■□□□□ 0.24
CCDC59-202ENST00000547758 CNGA1P29973 690 aa16.56■□□□□ 0.24
CCDC59-202ENST00000547758 SHHQ15465 462 aa16.56■□□□□ 0.24
CCDC59-202ENST00000547758 WDR78Q5VTH9 848 aa16.56■□□□□ 0.24
CCDC59-202ENST00000547758 SEMA6BQ9H3T3 888 aa16.56■□□□□ 0.24
CCDC59-202ENST00000547758 PRDM6Q9NQX0 595 aa16.56■□□□□ 0.24
CCDC59-202ENST00000547758 PALD1Q9ULE6 856 aa16.56■□□□□ 0.24
CCDC59-202ENST00000547758 ATMINO43313 823 aaPredicted RBP16.55■□□□□ 0.24
CCDC59-202ENST00000547758 PTPREP23469 700 aa16.55■□□□□ 0.24
CCDC59-202ENST00000547758 ATP2B2Q01814 1243 aa16.55■□□□□ 0.24
CCDC59-202ENST00000547758 SLFN5Q08AF3 891 aa16.55■□□□□ 0.24
CCDC59-202ENST00000547758 NAA16Q6N069 864 aaPredicted RBP16.55■□□□□ 0.24
CCDC59-202ENST00000547758 C12orf42Q96LP6 360 aa16.55■□□□□ 0.24
CCDC59-202ENST00000547758 API5Q9BZZ5 524 aaKnown RBP16.55■□□□□ 0.24
CCDC59-202ENST00000547758 NOB1Q9ULX3 412 aaKnown RBP16.55■□□□□ 0.24
CCDC59-202ENST00000547758 ATP11BQ9Y2G3 1177 aa16.55■□□□□ 0.24
CCDC59-202ENST00000547758 ZNFX1Q9P2E3 1918 aaKnown RBP16.55■□□□□ 0.24
CCDC59-202ENST00000547758 USP17L15C9J2P7 530 aa16.54■□□□□ 0.24
CCDC59-202ENST00000547758 USP17L13C9JLJ4 530 aa16.54■□□□□ 0.24
CCDC59-202ENST00000547758 USP17L11C9JVI0 530 aa16.54■□□□□ 0.24
CCDC59-202ENST00000547758 USP17L18D6R9N7 530 aa16.54■□□□□ 0.24
CCDC59-202ENST00000547758 USP17L22D6RA61 530 aa16.54■□□□□ 0.24
CCDC59-202ENST00000547758 USP17L17D6RBQ6 530 aa16.54■□□□□ 0.24
CCDC59-202ENST00000547758 USP17L19D6RCP7 530 aa16.54■□□□□ 0.24
CCDC59-202ENST00000547758 USP17L20D6RJB6 530 aa16.54■□□□□ 0.24
CCDC59-202ENST00000547758 HOXC6P09630 235 aa16.54■□□□□ 0.24
CCDC59-202ENST00000547758 UQCRFS1P1P0C7P4 283 aa16.54■□□□□ 0.24
CCDC59-202ENST00000547758 PPP4CP60510 307 aa16.54■□□□□ 0.24
CCDC59-202ENST00000547758 USP17L24Q0WX57 530 aa16.54■□□□□ 0.24
CCDC59-202ENST00000547758 MTX1Q13505 466 aa16.54■□□□□ 0.24
CCDC59-202ENST00000547758 GRB14Q14449 540 aa16.54■□□□□ 0.24
CCDC59-202ENST00000547758 ZYXQ15942 572 aaKnown RBP16.54■□□□□ 0.24
CCDC59-202ENST00000547758 C9orf50Q5SZB4 431 aa16.54■□□□□ 0.24
CCDC59-202ENST00000547758 MYLIPQ8WY64 445 aa16.54■□□□□ 0.24
CCDC59-202ENST00000547758 FEZ1Q99689 392 aa16.54■□□□□ 0.24
CCDC59-202ENST00000547758 IVNS1ABPQ9Y6Y0 642 aa16.54■□□□□ 0.24
CCDC59-202ENST00000547758 SMCHD1A6NHR9 2005 aa16.53■□□□□ 0.24
CCDC59-202ENST00000547758 GH2P01242 217 aa16.53■□□□□ 0.24
CCDC59-202ENST00000547758 HLA-DOAP06340 250 aa16.53■□□□□ 0.24
CCDC59-202ENST00000547758 CYP2C19P33261 490 aa16.53■□□□□ 0.24
CCDC59-202ENST00000547758 SMAD3P84022 425 aaKnown RBP16.53■□□□□ 0.24
CCDC59-202ENST00000547758 GJC2Q5T442 439 aaPredicted RBP16.53■□□□□ 0.24
CCDC59-202ENST00000547758 ATF7IPQ6VMQ6 1270 aa16.53■□□□□ 0.24
CCDC59-202ENST00000547758 ADGRA1Q86SQ6 560 aa16.53■□□□□ 0.24
CCDC59-202ENST00000547758 TRPV1Q8NER1 839 aa16.53■□□□□ 0.24
CCDC59-202ENST00000547758 NPLOC4Q8TAT6 608 aa16.53■□□□□ 0.24
CCDC59-202ENST00000547758 TTYH1Q9H313 450 aaPredicted RBP16.53■□□□□ 0.24
CCDC59-202ENST00000547758 PRDM5Q9NQX1 630 aaPredicted RBP16.53■□□□□ 0.24
CCDC59-202ENST00000547758 SAP30BPQ9UHR5 308 aaKnown RBP16.53■□□□□ 0.24
CCDC59-202ENST00000547758 GNAI3P08754 354 aa16.52■□□□□ 0.24
CCDC59-202ENST00000547758 CYBAP13498 195 aa16.52■□□□□ 0.24
CCDC59-202ENST00000547758 LBX2Q6XYB7 198 aa16.52■□□□□ 0.24
CCDC59-202ENST00000547758 SLC39A5Q6ZMH5 540 aa16.52■□□□□ 0.24
CCDC59-202ENST00000547758 CATSPERGQ6ZRH7 1159 aa16.52■□□□□ 0.24
CCDC59-202ENST00000547758 RASEFQ8IZ41 740 aa16.52■□□□□ 0.24
CCDC59-202ENST00000547758 ARRDC4Q8NCT1 418 aa16.52■□□□□ 0.24
CCDC59-202ENST00000547758 KIF12Q96FN5 646 aa16.52■□□□□ 0.24
CCDC59-202ENST00000547758 A0A0G2JMZ2 1700 aa16.52■□□□□ 0.24
CCDC59-202ENST00000547758 MYO9BQ13459 2157 aa16.52■□□□□ 0.24
CCDC59-202ENST00000547758 KBTBD13C9JR72 458 aa16.51■□□□□ 0.23
CCDC59-202ENST00000547758 IGHA2P01877 340 aa16.51■□□□□ 0.23
CCDC59-202ENST00000547758 FOSL2P15408 326 aa16.51■□□□□ 0.23
CCDC59-202ENST00000547758 VCAM1P19320 739 aa16.51■□□□□ 0.23
CCDC59-202ENST00000547758 USP14P54578 494 aa16.51■□□□□ 0.23
CCDC59-202ENST00000547758 SYMPKQ92797 1274 aaKnown RBP16.51■□□□□ 0.23
CCDC59-202ENST00000547758 BADQ92934 168 aa16.51■□□□□ 0.23
CCDC59-202ENST00000547758 SNRKQ9NRH2 765 aa16.51■□□□□ 0.23
CCDC59-202ENST00000547758 BTBD7Q9P203 1132 aa16.51■□□□□ 0.23
CCDC59-202ENST00000547758 SNX17Q15036 470 aa16.5■□□□□ 0.23
CCDC59-202ENST00000547758 TRIM60Q495X7 471 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms