RNA–Protein interactions for RNA: ENST00000547338.5

RBFOX1-207, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-207ENST00000547338 SDR42E1Q8WUS8 393 aa20.34■□□□□ 0.85
RBFOX1-207ENST00000547338 MBD4O95243 580 aa20.33■□□□□ 0.85
RBFOX1-207ENST00000547338 MRE11P49959 708 aa20.33■□□□□ 0.85
RBFOX1-207ENST00000547338 PLCD1P51178 756 aa20.33■□□□□ 0.85
RBFOX1-207ENST00000547338 RASEFQ8IZ41 740 aa20.33■□□□□ 0.85
RBFOX1-207ENST00000547338 PUS7LQ9H0K6 701 aaKnown RBP20.33■□□□□ 0.85
RBFOX1-207ENST00000547338 EHD4Q9H223 541 aa20.33■□□□□ 0.85
RBFOX1-207ENST00000547338 DCP1AQ9NPI6 582 aaPredicted RBP20.33■□□□□ 0.85
RBFOX1-207ENST00000547338 LOC285556D6RIA3 1793 aa20.33■□□□□ 0.84
RBFOX1-207ENST00000547338 TRIM75PA6NK02 468 aa20.32■□□□□ 0.84
RBFOX1-207ENST00000547338 PTH1RQ03431 593 aa20.32■□□□□ 0.84
RBFOX1-207ENST00000547338 CREB3L3Q68CJ9 461 aa20.32■□□□□ 0.84
RBFOX1-207ENST00000547338 RUFY3Q7L099 469 aa20.32■□□□□ 0.84
RBFOX1-207ENST00000547338 KBTBD3Q8NAB2 608 aa20.32■□□□□ 0.84
RBFOX1-207ENST00000547338 UPF3BQ9BZI7 483 aaKnown RBP20.32■□□□□ 0.84
RBFOX1-207ENST00000547338 CRNKL1Q9BZJ0 848 aaKnown RBP20.32■□□□□ 0.84
RBFOX1-207ENST00000547338 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.32■□□□□ 0.84
RBFOX1-207ENST00000547338 RBM8AQ9Y5S9 174 aaKnown RBP20.32■□□□□ 0.84
RBFOX1-207ENST00000547338 BAZ2AQ9UIF9 1905 aaKnown RBP20.32■□□□□ 0.84
RBFOX1-207ENST00000547338 SMIM22K7EJ46 135 aa20.32■□□□□ 0.84
RBFOX1-207ENST00000547338 PDHXO00330 501 aa20.32■□□□□ 0.84
RBFOX1-207ENST00000547338 GDF11O95390 407 aa20.32■□□□□ 0.84
RBFOX1-207ENST00000547338 TATDN1Q6P1N9 297 aa20.32■□□□□ 0.84
RBFOX1-207ENST00000547338 ZFYVE28Q9HCC9 887 aa20.32■□□□□ 0.84
RBFOX1-207ENST00000547338 HELLSQ9NRZ9 838 aa20.32■□□□□ 0.84
RBFOX1-207ENST00000547338 PDRG1Q9NUG6 133 aa20.32■□□□□ 0.84
RBFOX1-207ENST00000547338 U3KPZ7 1027 aaPredicted RBP20.32■□□□□ 0.84
RBFOX1-207ENST00000547338 TLR2O60603 784 aa20.31■□□□□ 0.84
RBFOX1-207ENST00000547338 CYP2D6P10635 497 aa20.31■□□□□ 0.84
RBFOX1-207ENST00000547338 GABPAQ06546 454 aa20.31■□□□□ 0.84
RBFOX1-207ENST00000547338 CRACR2BQ8N4Y2 399 aaPredicted RBP20.31■□□□□ 0.84
RBFOX1-207ENST00000547338 CD99L2Q8TCZ2 262 aa20.31■□□□□ 0.84
RBFOX1-207ENST00000547338 ZDHHC9Q9Y397 364 aa20.31■□□□□ 0.84
RBFOX1-207ENST00000547338 HLA-DOAP06340 250 aa20.3■□□□□ 0.84
RBFOX1-207ENST00000547338 CASTP20810 708 aaKnown RBP20.3■□□□□ 0.84
RBFOX1-207ENST00000547338 SHMT1P34896 483 aa20.3■□□□□ 0.84
RBFOX1-207ENST00000547338 AK2P54819 239 aa20.3■□□□□ 0.84
RBFOX1-207ENST00000547338 MCMDC2Q4G0Z9 681 aa20.3■□□□□ 0.84
RBFOX1-207ENST00000547338 SERPINB13Q9UIV8 391 aa20.3■□□□□ 0.84
RBFOX1-207ENST00000547338 SP3Q02447 781 aa20.29■□□□□ 0.84
RBFOX1-207ENST00000547338 SPP2Q13103 211 aa20.29■□□□□ 0.84
RBFOX1-207ENST00000547338 C17orf99Q6UX52 265 aa20.29■□□□□ 0.84
RBFOX1-207ENST00000547338 OTOP1Q7RTM1 612 aa20.29■□□□□ 0.84
RBFOX1-207ENST00000547338 ZNF280CQ8ND82 737 aa20.29■□□□□ 0.84
RBFOX1-207ENST00000547338 OSBP2Q969R2 916 aa20.29■□□□□ 0.84
RBFOX1-207ENST00000547338 FAM227BQ96M60 508 aa20.29■□□□□ 0.84
RBFOX1-207ENST00000547338 JAKMIP1Q96N16 626 aaKnown RBP20.29■□□□□ 0.84
RBFOX1-207ENST00000547338 LMBRD1Q9NUN5 540 aa20.29■□□□□ 0.84
RBFOX1-207ENST00000547338 ZBTB21Q9ULJ3 1066 aa20.29■□□□□ 0.84
RBFOX1-207ENST00000547338 ATP6V1DQ9Y5K8 247 aa20.29■□□□□ 0.84
RBFOX1-207ENST00000547338 DDX49Q9Y6V7 483 aaKnown RBP20.29■□□□□ 0.84
RBFOX1-207ENST00000547338 USP17L5A8MUK1 530 aa20.28■□□□□ 0.84
RBFOX1-207ENST00000547338 SLC27A2O14975 620 aa20.28■□□□□ 0.84
RBFOX1-207ENST00000547338 MBD3O95983 291 aa20.28■□□□□ 0.84
RBFOX1-207ENST00000547338 CYP2C8P10632 490 aa20.28■□□□□ 0.84
RBFOX1-207ENST00000547338 TREML2Q5T2D2 321 aa20.28■□□□□ 0.84
RBFOX1-207ENST00000547338 MCTP1Q6DN14 999 aa20.28■□□□□ 0.84
RBFOX1-207ENST00000547338 WDR18Q9BV38 432 aa20.28■□□□□ 0.84
RBFOX1-207ENST00000547338 MCM9Q9NXL9 1143 aa20.28■□□□□ 0.84
RBFOX1-207ENST00000547338 A0A0D9SFI3 127 aa20.27■□□□□ 0.84
RBFOX1-207ENST00000547338 CTGFP29279 349 aa20.27■□□□□ 0.84
RBFOX1-207ENST00000547338 GADL1Q6ZQY3 521 aa20.27■□□□□ 0.84
RBFOX1-207ENST00000547338 TTC6Q86TZ1 520 aa20.27■□□□□ 0.84
RBFOX1-207ENST00000547338 ARHGAP39Q9C0H5 1083 aa20.27■□□□□ 0.84
RBFOX1-207ENST00000547338 CYP2D7A0A087X1C5 515 aa20.27■□□□□ 0.83
RBFOX1-207ENST00000547338 RNF113AO15541 343 aaKnown RBP20.27■□□□□ 0.83
RBFOX1-207ENST00000547338 ASNSP08243 561 aa20.27■□□□□ 0.83
RBFOX1-207ENST00000547338 SH3D19Q5HYK7 790 aa20.27■□□□□ 0.83
RBFOX1-207ENST00000547338 ZSCAN25Q6NSZ9 544 aa20.27■□□□□ 0.83
RBFOX1-207ENST00000547338 FASTKD5Q7L8L6 764 aaKnown RBP20.27■□□□□ 0.83
RBFOX1-207ENST00000547338 SLC44A5Q8NCS7 719 aa20.27■□□□□ 0.83
RBFOX1-207ENST00000547338 CHMP4CQ96CF2 233 aa20.27■□□□□ 0.83
RBFOX1-207ENST00000547338 ERO1AQ96HE7 468 aa20.27■□□□□ 0.83
RBFOX1-207ENST00000547338 STRBPQ96SI9 672 aaKnown RBP20.27■□□□□ 0.83
RBFOX1-207ENST00000547338 CPA4Q9UI42 421 aa20.27■□□□□ 0.83
RBFOX1-207ENST00000547338 HPS5Q9UPZ3 1129 aa20.27■□□□□ 0.83
RBFOX1-207ENST00000547338 M0R2C6 588 aa20.26■□□□□ 0.83
RBFOX1-207ENST00000547338 GH2P01242 217 aa20.26■□□□□ 0.83
RBFOX1-207ENST00000547338 POLR3DP05423 398 aaPredicted RBP20.26■□□□□ 0.83
RBFOX1-207ENST00000547338 ZFYP08048 801 aaPredicted RBP20.26■□□□□ 0.83
RBFOX1-207ENST00000547338 HMGB1P09429 215 aaKnown RBP20.26■□□□□ 0.83
RBFOX1-207ENST00000547338 GUCY1A2P33402 732 aa20.26■□□□□ 0.83
RBFOX1-207ENST00000547338 HMGCS2P54868 508 aa20.26■□□□□ 0.83
RBFOX1-207ENST00000547338 PKN2Q16513 984 aaKnown RBP20.26■□□□□ 0.83
RBFOX1-207ENST00000547338 BLOC1S2Q6QNY1 142 aa20.26■□□□□ 0.83
RBFOX1-207ENST00000547338 APPBP2Q92624 585 aa20.26■□□□□ 0.83
RBFOX1-207ENST00000547338 TRIM34Q9BYJ4 488 aa20.26■□□□□ 0.83
RBFOX1-207ENST00000547338 ATP8A2Q9NTI2 1148 aa20.26■□□□□ 0.83
RBFOX1-207ENST00000547338 AGTPBP1Q9UPW5 1226 aa20.26■□□□□ 0.83
RBFOX1-207ENST00000547338 SMC3Q9UQE7 1217 aa20.26■□□□□ 0.83
RBFOX1-207ENST00000547338 SLC45A1Q9Y2W3 748 aa20.26■□□□□ 0.83
RBFOX1-207ENST00000547338 TRIM17Q9Y577 477 aa20.26■□□□□ 0.83
RBFOX1-207ENST00000547338 BCRP11274 1271 aa20.25■□□□□ 0.83
RBFOX1-207ENST00000547338 PROCA1Q8NCQ7 364 aaPredicted RBP20.25■□□□□ 0.83
RBFOX1-207ENST00000547338 DYNLL2Q96FJ2 89 aa20.25■□□□□ 0.83
RBFOX1-207ENST00000547338 DSCC1Q9BVC3 393 aa20.25■□□□□ 0.83
RBFOX1-207ENST00000547338 GINM1Q9NU53 330 aa20.25■□□□□ 0.83
RBFOX1-207ENST00000547338 SLC4A4Q9Y6R1 1079 aa20.25■□□□□ 0.83
RBFOX1-207ENST00000547338 CENPFP49454 3210 aa20.24■□□□□ 0.83
RBFOX1-207ENST00000547338 CCDC85CA6NKD9 419 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms