RNA–Protein interactions for RNA: ENST00000546873.1

CHPT1-203, Transcript of choline phosphotransferase 1, humanhuman

TSL 3

Gene CHPT1, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-203ENST00000546873 GSX1Q9H4S2 264 aaPredicted RBP9.86□□□□□ -0.83
CHPT1-203ENST00000546873 SPATA31A6Q5VVP1 1343 aa9.85□□□□□ -0.83
CHPT1-203ENST00000546873 ADMP35318 185 aa9.85□□□□□ -0.83
CHPT1-203ENST00000546873 SULF2Q8IWU5 870 aa9.85□□□□□ -0.83
CHPT1-203ENST00000546873 PPP1R9AQ9ULJ8 1098 aa9.85□□□□□ -0.83
CHPT1-203ENST00000546873 ERVK-7P63135 1459 aa9.85□□□□□ -0.83
CHPT1-203ENST00000546873 ARHGAP23Q9P227 1491 aa9.85□□□□□ -0.83
CHPT1-203ENST00000546873 SPHKAPQ2M3C7 1700 aa9.85□□□□□ -0.83
CHPT1-203ENST00000546873 UBR1Q8IWV7 1749 aa9.85□□□□□ -0.83
CHPT1-203ENST00000546873 HOXA10P31260 410 aaPredicted RBP9.84□□□□□ -0.83
CHPT1-203ENST00000546873 DIEXFQ68CQ4 756 aaKnown RBP9.84□□□□□ -0.83
CHPT1-203ENST00000546873 CRIM1Q9NZV1 1036 aa9.84□□□□□ -0.83
CHPT1-203ENST00000546873 SPG7Q9UQ90 795 aa9.84□□□□□ -0.83
CHPT1-203ENST00000546873 AFF2P51816 1311 aa9.83□□□□□ -0.84
CHPT1-203ENST00000546873 TRPM2O94759 1503 aa9.83□□□□□ -0.84
CHPT1-203ENST00000546873 EFCAB6Q5THR3 1501 aa9.83□□□□□ -0.84
CHPT1-203ENST00000546873 FAM170BA6NMN3 283 aa9.83□□□□□ -0.84
CHPT1-203ENST00000546873 TMPRSS2O15393 492 aa9.83□□□□□ -0.84
CHPT1-203ENST00000546873 NME2P22392 152 aa9.83□□□□□ -0.84
CHPT1-203ENST00000546873 ARNTP27540 789 aa9.83□□□□□ -0.84
CHPT1-203ENST00000546873 FMR1Q06787 632 aaKnown RBP eCLIP9.83□□□□□ -0.84
CHPT1-203ENST00000546873 KIF4BQ2VIQ3 1234 aa9.83□□□□□ -0.84
CHPT1-203ENST00000546873 CBX8Q9HC52 389 aa9.83□□□□□ -0.84
CHPT1-203ENST00000546873 PPM1HQ9ULR3 514 aa9.83□□□□□ -0.84
CHPT1-203ENST00000546873 SLIT1O75093 1534 aa9.82□□□□□ -0.84
CHPT1-203ENST00000546873 MROH1Q8NDA8 1641 aa9.82□□□□□ -0.84
CHPT1-203ENST00000546873 KCNA6P17658 529 aa9.82□□□□□ -0.84
CHPT1-203ENST00000546873 CYP27C1Q4G0S4 372 aa9.82□□□□□ -0.84
CHPT1-203ENST00000546873 WDR89Q96FK6 387 aaPredicted RBP9.82□□□□□ -0.84
CHPT1-203ENST00000546873 ACSBG1Q96GR2 724 aa9.82□□□□□ -0.84
CHPT1-203ENST00000546873 FANCD2OSQ96PS1 177 aa9.82□□□□□ -0.84
CHPT1-203ENST00000546873 SLC26A8Q96RN1 970 aa9.82□□□□□ -0.84
CHPT1-203ENST00000546873 LGR6Q9HBX8 967 aa9.82□□□□□ -0.84
CHPT1-203ENST00000546873 MSH6P52701 1360 aa9.82□□□□□ -0.84
CHPT1-203ENST00000546873 E9PCH4 1651 aa9.82□□□□□ -0.84
CHPT1-203ENST00000546873 LMTK2Q8IWU2 1503 aa9.82□□□□□ -0.84
CHPT1-203ENST00000546873 ZNF862O60290 1169 aa9.81□□□□□ -0.84
CHPT1-203ENST00000546873 RNGTTO60942 597 aaKnown RBP9.81□□□□□ -0.84
CHPT1-203ENST00000546873 LRRC4CQ9HCJ2 640 aa9.81□□□□□ -0.84
CHPT1-203ENST00000546873 OAS3Q9Y6K5 1087 aaKnown RBP9.81□□□□□ -0.84
CHPT1-203ENST00000546873 CEP152O94986 1710 aa9.81□□□□□ -0.84
CHPT1-203ENST00000546873 ABCC3O15438 1527 aa9.81□□□□□ -0.84
CHPT1-203ENST00000546873 MAP1SQ66K74 1059 aaPredicted RBP9.8□□□□□ -0.84
CHPT1-203ENST00000546873 MCTP1Q6DN14 999 aa9.8□□□□□ -0.84
CHPT1-203ENST00000546873 TPTE2Q6XPS3 522 aa9.8□□□□□ -0.84
CHPT1-203ENST00000546873 SMYD4Q8IYR2 804 aaPredicted RBP9.8□□□□□ -0.84
CHPT1-203ENST00000546873 SHISA5Q8N114 240 aa9.8□□□□□ -0.84
CHPT1-203ENST00000546873 GATA6Q92908 595 aa9.8□□□□□ -0.84
CHPT1-203ENST00000546873 SSU72Q9NP77 194 aaKnown RBP9.8□□□□□ -0.84
CHPT1-203ENST00000546873 BSDC1Q9NW68 430 aaPredicted RBP9.8□□□□□ -0.84
CHPT1-203ENST00000546873 FGD1P98174 961 aa9.79□□□□□ -0.84
CHPT1-203ENST00000546873 MSMPQ1L6U9 139 aa9.79□□□□□ -0.84
CHPT1-203ENST00000546873 OGFOD3Q6PK18 319 aa9.79□□□□□ -0.84
CHPT1-203ENST00000546873 ZNF765Q7L2R6 523 aa9.79□□□□□ -0.84
CHPT1-203ENST00000546873 PDZD3Q86UT5 571 aa9.79□□□□□ -0.84
CHPT1-203ENST00000546873 VSIG10LQ86VR7 867 aa9.79□□□□□ -0.84
CHPT1-203ENST00000546873 EID1Q9Y6B2 187 aa9.79□□□□□ -0.84
CHPT1-203ENST00000546873 SHPRHQ149N8 1683 aa9.79□□□□□ -0.84
CHPT1-203ENST00000546873 RBM6P78332 1123 aaKnown RBP9.78□□□□□ -0.84
CHPT1-203ENST00000546873 LRRC14Q15048 493 aa9.78□□□□□ -0.84
CHPT1-203ENST00000546873 C3orf58Q8NDZ4 430 aa9.78□□□□□ -0.84
CHPT1-203ENST00000546873 FBXL18Q96ME1 805 aa9.78□□□□□ -0.84
CHPT1-203ENST00000546873 FRMD6Q96NE9 622 aa9.78□□□□□ -0.84
CHPT1-203ENST00000546873 NECAB3Q96P71 396 aaPredicted RBP9.78□□□□□ -0.84
CHPT1-203ENST00000546873 PICK1Q9NRD5 415 aa9.78□□□□□ -0.84
CHPT1-203ENST00000546873 DISC1Q9NRI5 854 aa9.78□□□□□ -0.84
CHPT1-203ENST00000546873 C1GALT1Q9NS00 363 aa9.78□□□□□ -0.84
CHPT1-203ENST00000546873 RALGAPBQ86X10 1494 aa9.78□□□□□ -0.84
CHPT1-203ENST00000546873 DYNC1LI2O43237 492 aaPredicted RBP9.77□□□□□ -0.85
CHPT1-203ENST00000546873 ADAMTS4O75173 837 aa9.77□□□□□ -0.85
CHPT1-203ENST00000546873 LDHBP07195 334 aaKnown RBP9.77□□□□□ -0.85
CHPT1-203ENST00000546873 TTLL4Q14679 1199 aa9.77□□□□□ -0.85
CHPT1-203ENST00000546873 SEZ6L2Q6UXD5 910 aa9.77□□□□□ -0.85
CHPT1-203ENST00000546873 FAM8A1Q9UBU6 413 aa9.77□□□□□ -0.85
CHPT1-203ENST00000546873 PCOLCE2Q9UKZ9 415 aa9.77□□□□□ -0.85
CHPT1-203ENST00000546873 NKTRP30414 1462 aaKnown RBP9.77□□□□□ -0.85
CHPT1-203ENST00000546873 TMEM2Q9UHN6 1383 aa9.76□□□□□ -0.85
CHPT1-203ENST00000546873 DIP2AQ14689 1571 aa9.76□□□□□ -0.85
CHPT1-203ENST00000546873 NWD1Q149M9 1564 aa9.76□□□□□ -0.85
CHPT1-203ENST00000546873 AHDC1Q5TGY3 1603 aaPredicted RBP9.76□□□□□ -0.85
CHPT1-203ENST00000546873 PAX4O43316 350 aa9.76□□□□□ -0.85
CHPT1-203ENST00000546873 HCLS1P14317 486 aaPredicted RBP9.76□□□□□ -0.85
CHPT1-203ENST00000546873 STK35Q8TDR2 534 aa9.76□□□□□ -0.85
CHPT1-203ENST00000546873 C8orf37Q96NL8 207 aa9.76□□□□□ -0.85
CHPT1-203ENST00000546873 OSBPL7Q9BZF2 842 aa9.76□□□□□ -0.85
CHPT1-203ENST00000546873 C12orf49Q9H741 205 aa9.76□□□□□ -0.85
CHPT1-203ENST00000546873 CCDC39Q9UFE4 941 aa9.76□□□□□ -0.85
CHPT1-203ENST00000546873 WWC3Q9ULE0 1092 aa9.76□□□□□ -0.85
CHPT1-203ENST00000546873 CLTCL1P53675 1640 aa9.75□□□□□ -0.85
CHPT1-203ENST00000546873 KDM5AP29375 1690 aaKnown RBP9.75□□□□□ -0.85
CHPT1-203ENST00000546873 PRNPP04156 253 aa9.75□□□□□ -0.85
CHPT1-203ENST00000546873 GPBAR1Q8TDU6 330 aa9.75□□□□□ -0.85
CHPT1-203ENST00000546873 SETDB2Q96T68 719 aa9.75□□□□□ -0.85
CHPT1-203ENST00000546873 KRTAP4-8Q9BYQ9 185 aa9.75□□□□□ -0.85
CHPT1-203ENST00000546873 PCDHGC5Q9Y5F6 944 aa9.75□□□□□ -0.85
CHPT1-203ENST00000546873 KIF1BO60333 1816 aa9.75□□□□□ -0.85
CHPT1-203ENST00000546873 P4HBP07237 508 aaKnown RBP9.74□□□□□ -0.85
CHPT1-203ENST00000546873 FAM87AP0C7U9 286 aa9.74□□□□□ -0.85
CHPT1-203ENST00000546873 ERVK-24P63145 666 aa9.74□□□□□ -0.85
CHPT1-203ENST00000546873 CDK5R2Q13319 367 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms