RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 CTDSPL2Q05D32 466 aa17.18■□□□□ 0.34
DDX54-203ENST00000546869 IMMTQ16891 758 aaKnown RBP17.18■□□□□ 0.34
DDX54-203ENST00000546869 SIAH1Q8IUQ4 282 aa17.18■□□□□ 0.34
DDX54-203ENST00000546869 FAM43AQ8N2R8 423 aa17.18■□□□□ 0.34
DDX54-203ENST00000546869 NEDD1Q8NHV4 660 aa17.18■□□□□ 0.34
DDX54-203ENST00000546869 STAG1Q8WVM7 1258 aa17.18■□□□□ 0.34
DDX54-203ENST00000546869 C12orf42Q96LP6 360 aa17.18■□□□□ 0.34
DDX54-203ENST00000546869 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.18■□□□□ 0.34
DDX54-203ENST00000546869 RNF41Q9H4P4 317 aaPredicted RBP17.18■□□□□ 0.34
DDX54-203ENST00000546869 PHIPQ8WWQ0 1821 aa17.18■□□□□ 0.34
DDX54-203ENST00000546869 PLIN4Q96Q06 1357 aa17.17■□□□□ 0.34
DDX54-203ENST00000546869 IGKV6D-41A0A0C4DH26 115 aa17.17■□□□□ 0.34
DDX54-203ENST00000546869 PPP4R3BQ5MIZ7 849 aa17.17■□□□□ 0.34
DDX54-203ENST00000546869 AKNAD1Q5T1N1 836 aa17.17■□□□□ 0.34
DDX54-203ENST00000546869 USP17L2Q6R6M4 530 aa17.17■□□□□ 0.34
DDX54-203ENST00000546869 KIAA1211Q6ZU35 1233 aa17.17■□□□□ 0.34
DDX54-203ENST00000546869 NYAP2Q9P242 653 aa17.17■□□□□ 0.34
DDX54-203ENST00000546869 SYNPO2Q9UMS6 1093 aa17.17■□□□□ 0.34
DDX54-203ENST00000546869 AGTPBP1Q9UPW5 1226 aa17.17■□□□□ 0.34
DDX54-203ENST00000546869 TACC3Q9Y6A5 838 aa17.17■□□□□ 0.34
DDX54-203ENST00000546869 U3KPZ7 1027 aaPredicted RBP17.17■□□□□ 0.34
DDX54-203ENST00000546869 PRDM1O75626 825 aa17.16■□□□□ 0.34
DDX54-203ENST00000546869 HOXA7P31268 230 aaPredicted RBP17.16■□□□□ 0.34
DDX54-203ENST00000546869 HMGCS2P54868 508 aa17.16■□□□□ 0.34
DDX54-203ENST00000546869 PTH1RQ03431 593 aa17.16■□□□□ 0.34
DDX54-203ENST00000546869 ICA1Q05084 483 aa17.16■□□□□ 0.34
DDX54-203ENST00000546869 PABPC4Q13310 644 aaKnown RBP eCLIP17.16■□□□□ 0.34
DDX54-203ENST00000546869 MTMR2Q13614 643 aa17.16■□□□□ 0.34
DDX54-203ENST00000546869 MFSD6Q6ZSS7 791 aa17.16■□□□□ 0.34
DDX54-203ENST00000546869 MKL1Q969V6 931 aa17.16■□□□□ 0.34
DDX54-203ENST00000546869 NBPF3Q9H094 633 aa17.16■□□□□ 0.34
DDX54-203ENST00000546869 SH2D4AQ9H788 454 aa17.16■□□□□ 0.34
DDX54-203ENST00000546869 ARHGEF10LQ9HCE6 1279 aa17.16■□□□□ 0.34
DDX54-203ENST00000546869 EMILIN3Q9NT22 766 aa17.16■□□□□ 0.34
DDX54-203ENST00000546869 TMOD4Q9NZQ9 345 aa17.16■□□□□ 0.34
DDX54-203ENST00000546869 TMX2Q9Y320 296 aa17.16■□□□□ 0.34
DDX54-203ENST00000546869 ATAD5Q96QE3 1844 aa17.16■□□□□ 0.34
DDX54-203ENST00000546869 A0A1W2PRG0 241 aa17.15■□□□□ 0.34
DDX54-203ENST00000546869 PDHXO00330 501 aa17.15■□□□□ 0.34
DDX54-203ENST00000546869 TSPY3P0CV98 308 aa17.15■□□□□ 0.34
DDX54-203ENST00000546869 TSPY8P0CW00 308 aa17.15■□□□□ 0.34
DDX54-203ENST00000546869 HSPA8P11142 646 aaKnown RBP17.15■□□□□ 0.34
DDX54-203ENST00000546869 TFAP4Q01664 338 aa17.15■□□□□ 0.34
DDX54-203ENST00000546869 STK11IPQ8N1F8 1099 aa17.15■□□□□ 0.34
DDX54-203ENST00000546869 ACER1Q8TDN7 264 aa17.15■□□□□ 0.34
DDX54-203ENST00000546869 LSG1Q9H089 658 aaKnown RBP17.15■□□□□ 0.34
DDX54-203ENST00000546869 ZFYVE28Q9HCC9 887 aa17.15■□□□□ 0.34
DDX54-203ENST00000546869 PRDM10Q9NQV6 1147 aa17.15■□□□□ 0.34
DDX54-203ENST00000546869 TCP11L1Q9NUJ3 509 aa17.15■□□□□ 0.34
DDX54-203ENST00000546869 MTMR4Q9NYA4 1195 aa17.15■□□□□ 0.34
DDX54-203ENST00000546869 EEF2P13639 858 aaKnown RBP17.14■□□□□ 0.33
DDX54-203ENST00000546869 NOVP48745 357 aa17.14■□□□□ 0.33
DDX54-203ENST00000546869 HAND2P61296 217 aa17.14■□□□□ 0.33
DDX54-203ENST00000546869 TAF1CQ15572 869 aaPredicted RBP17.14■□□□□ 0.33
DDX54-203ENST00000546869 GADL1Q6ZQY3 521 aa17.14■□□□□ 0.33
DDX54-203ENST00000546869 INCENPQ9NQS7 918 aa17.14■□□□□ 0.33
DDX54-203ENST00000546869 TSPY2A6NKD2 308 aa17.13■□□□□ 0.33
DDX54-203ENST00000546869 TLR2O60603 784 aa17.13■□□□□ 0.33
DDX54-203ENST00000546869 TBC1D8O95759 1140 aa17.13■□□□□ 0.33
DDX54-203ENST00000546869 CRHR2Q13324 411 aa17.13■□□□□ 0.33
DDX54-203ENST00000546869 TREML2Q5T2D2 321 aa17.13■□□□□ 0.33
DDX54-203ENST00000546869 TBC1D10CQ8IV04 446 aa17.13■□□□□ 0.33
DDX54-203ENST00000546869 LPAR1Q92633 364 aa17.13■□□□□ 0.33
DDX54-203ENST00000546869 ESR2Q92731 530 aa17.13■□□□□ 0.33
DDX54-203ENST00000546869 PARK7Q99497 189 aaKnown RBP17.13■□□□□ 0.33
DDX54-203ENST00000546869 FEZ1Q99689 392 aa17.13■□□□□ 0.33
DDX54-203ENST00000546869 CNNM2Q9H8M5 875 aa17.13■□□□□ 0.33
DDX54-203ENST00000546869 PNMA3Q9UL41 463 aa17.13■□□□□ 0.33
DDX54-203ENST00000546869 GREB1LQ9C091 1923 aaPredicted RBP17.12■□□□□ 0.33
DDX54-203ENST00000546869 GPR25O00155 361 aa17.12■□□□□ 0.33
DDX54-203ENST00000546869 EPB41L2O43491 1005 aaKnown RBP17.12■□□□□ 0.33
DDX54-203ENST00000546869 RANBP6O60518 1105 aaKnown RBP17.12■□□□□ 0.33
DDX54-203ENST00000546869 TTLL1O95922 423 aa17.12■□□□□ 0.33
DDX54-203ENST00000546869 CYP21A2P08686 494 aa17.12■□□□□ 0.33
DDX54-203ENST00000546869 FAM47AQ5JRC9 791 aa17.12■□□□□ 0.33
DDX54-203ENST00000546869 CEP95Q96GE4 821 aa17.12■□□□□ 0.33
DDX54-203ENST00000546869 KRT23Q9C075 422 aa17.12■□□□□ 0.33
DDX54-203ENST00000546869 R3HDMLQ9H3Y0 253 aa17.12■□□□□ 0.33
DDX54-203ENST00000546869 VCPKMTQ9H867 229 aa17.12■□□□□ 0.33
DDX54-203ENST00000546869 IL17RBQ9NRM6 502 aa17.12■□□□□ 0.33
DDX54-203ENST00000546869 PCNTO95613 3336 aa17.11■□□□□ 0.33
DDX54-203ENST00000546869 OSBPP22059 807 aa17.11■□□□□ 0.33
DDX54-203ENST00000546869 LBX1P52954 281 aa17.11■□□□□ 0.33
DDX54-203ENST00000546869 NECTIN1Q15223 517 aa17.11■□□□□ 0.33
DDX54-203ENST00000546869 CCDC178Q5BJE1 867 aa17.11■□□□□ 0.33
DDX54-203ENST00000546869 C17orf99Q6UX52 265 aa17.11■□□□□ 0.33
DDX54-203ENST00000546869 TTC14Q96N46 770 aa17.11■□□□□ 0.33
DDX54-203ENST00000546869 ANO2Q9NQ90 1003 aa17.11■□□□□ 0.33
DDX54-203ENST00000546869 RBM8AQ9Y5S9 174 aaKnown RBP17.11■□□□□ 0.33
DDX54-203ENST00000546869 ADGRA2Q96PE1 1338 aa17.11■□□□□ 0.33
DDX54-203ENST00000546869 PTPRFP10586 1907 aa17.11■□□□□ 0.33
DDX54-203ENST00000546869 LOC285556D6RIA3 1793 aa17.1■□□□□ 0.33
DDX54-203ENST00000546869 USP17L15C9J2P7 530 aa17.1■□□□□ 0.33
DDX54-203ENST00000546869 USP17L13C9JLJ4 530 aa17.1■□□□□ 0.33
DDX54-203ENST00000546869 USP17L11C9JVI0 530 aa17.1■□□□□ 0.33
DDX54-203ENST00000546869 USP17L18D6R9N7 530 aa17.1■□□□□ 0.33
DDX54-203ENST00000546869 USP17L22D6RA61 530 aa17.1■□□□□ 0.33
DDX54-203ENST00000546869 USP17L17D6RBQ6 530 aa17.1■□□□□ 0.33
DDX54-203ENST00000546869 USP17L19D6RCP7 530 aa17.1■□□□□ 0.33
DDX54-203ENST00000546869 USP17L20D6RJB6 530 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms