RNA–Protein interactions for RNA: ENST00000546697.1

SSH1-204, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-204ENST00000546697 CDK8P49336 464 aa18.39■□□□□ 0.53
SSH1-204ENST00000546697 GTF3C2Q8WUA4 911 aaPredicted RBP18.39■□□□□ 0.53
SSH1-204ENST00000546697 TMOD4Q9NZQ9 345 aa18.39■□□□□ 0.53
SSH1-204ENST00000546697 ZBTB47Q9UFB7 747 aaPredicted RBP18.39■□□□□ 0.53
SSH1-204ENST00000546697 PATL2C9JE40 543 aaKnown RBP18.38■□□□□ 0.53
SSH1-204ENST00000546697 M0R2C6 588 aa18.38■□□□□ 0.53
SSH1-204ENST00000546697 OSBPP22059 807 aa18.38■□□□□ 0.53
SSH1-204ENST00000546697 SIAH1Q8IUQ4 282 aa18.38■□□□□ 0.53
SSH1-204ENST00000546697 AMOTL1Q8IY63 956 aa18.38■□□□□ 0.53
SSH1-204ENST00000546697 SLC44A5Q8NCS7 719 aa18.38■□□□□ 0.53
SSH1-204ENST00000546697 SMCR8Q8TEV9 937 aaPredicted RBP18.38■□□□□ 0.53
SSH1-204ENST00000546697 ZNF333Q96JL9 665 aa18.38■□□□□ 0.53
SSH1-204ENST00000546697 MYH8P13535 1937 aa18.37■□□□□ 0.53
SSH1-204ENST00000546697 SMIM22K7EJ46 135 aa18.37■□□□□ 0.53
SSH1-204ENST00000546697 FOXP2O15409 715 aa18.37■□□□□ 0.53
SSH1-204ENST00000546697 HOXD10P28358 340 aa18.37■□□□□ 0.53
SSH1-204ENST00000546697 SEPT2Q15019 361 aa18.37■□□□□ 0.53
SSH1-204ENST00000546697 PLEKHM2Q8IWE5 1019 aa18.37■□□□□ 0.53
SSH1-204ENST00000546697 ACER1Q8TDN7 264 aa18.37■□□□□ 0.53
SSH1-204ENST00000546697 DYNLL2Q96FJ2 89 aa18.37■□□□□ 0.53
SSH1-204ENST00000546697 FSD1Q9BTV5 496 aa18.37■□□□□ 0.53
SSH1-204ENST00000546697 LNPKQ9C0E8 428 aa18.37■□□□□ 0.53
SSH1-204ENST00000546697 PTCH2Q9Y6C5 1203 aa18.37■□□□□ 0.53
SSH1-204ENST00000546697 CYP2D7A0A087X1C5 515 aa18.36■□□□□ 0.53
SSH1-204ENST00000546697 A0A1W2PRG0 241 aa18.36■□□□□ 0.53
SSH1-204ENST00000546697 FCGRTP55899 365 aa18.36■□□□□ 0.53
SSH1-204ENST00000546697 IRF5Q13568 498 aa18.36■□□□□ 0.53
SSH1-204ENST00000546697 POTEEQ6S8J3 1075 aa18.36■□□□□ 0.53
SSH1-204ENST00000546697 TMX2Q9Y320 296 aa18.36■□□□□ 0.53
SSH1-204ENST00000546697 AKR1B1P15121 316 aa18.35■□□□□ 0.53
SSH1-204ENST00000546697 VCAM1P19320 739 aa18.35■□□□□ 0.53
SSH1-204ENST00000546697 HERVK_113P62684 666 aa18.35■□□□□ 0.53
SSH1-204ENST00000546697 RAB3GAP1Q15042 981 aa18.35■□□□□ 0.53
SSH1-204ENST00000546697 CATSPERGQ6ZRH7 1159 aa18.35■□□□□ 0.53
SSH1-204ENST00000546697 IFNL3Q8IZI9 196 aa18.35■□□□□ 0.53
SSH1-204ENST00000546697 SEC62Q99442 399 aaKnown RBP18.35■□□□□ 0.53
SSH1-204ENST00000546697 P2RX7Q99572 595 aaKnown RBP18.35■□□□□ 0.53
SSH1-204ENST00000546697 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.35■□□□□ 0.53
SSH1-204ENST00000546697 HELLSQ9NRZ9 838 aa18.35■□□□□ 0.53
SSH1-204ENST00000546697 MKI67P46013 3256 aaKnown RBP18.35■□□□□ 0.53
SSH1-204ENST00000546697 PLIN4Q96Q06 1357 aa18.34■□□□□ 0.53
SSH1-204ENST00000546697 ZMYM6O95789 1325 aa18.34■□□□□ 0.53
SSH1-204ENST00000546697 RLFQ13129 1914 aa18.34■□□□□ 0.53
SSH1-204ENST00000546697 USP17L15C9J2P7 530 aa18.34■□□□□ 0.53
SSH1-204ENST00000546697 USP17L13C9JLJ4 530 aa18.34■□□□□ 0.53
SSH1-204ENST00000546697 USP17L11C9JVI0 530 aa18.34■□□□□ 0.53
SSH1-204ENST00000546697 USP17L18D6R9N7 530 aa18.34■□□□□ 0.53
SSH1-204ENST00000546697 USP17L22D6RA61 530 aa18.34■□□□□ 0.53
SSH1-204ENST00000546697 USP17L17D6RBQ6 530 aa18.34■□□□□ 0.53
SSH1-204ENST00000546697 USP17L19D6RCP7 530 aa18.34■□□□□ 0.53
SSH1-204ENST00000546697 USP17L20D6RJB6 530 aa18.34■□□□□ 0.53
SSH1-204ENST00000546697 RASA1P20936 1047 aa18.34■□□□□ 0.53
SSH1-204ENST00000546697 IRX3P78415 501 aaPredicted RBP18.34■□□□□ 0.53
SSH1-204ENST00000546697 USP17L24Q0WX57 530 aa18.34■□□□□ 0.53
SSH1-204ENST00000546697 ALX1Q15699 326 aa18.34■□□□□ 0.53
SSH1-204ENST00000546697 ANKRD13CQ8N6S4 541 aa18.34■□□□□ 0.53
SSH1-204ENST00000546697 LPAR1Q92633 364 aa18.34■□□□□ 0.53
SSH1-204ENST00000546697 KANSL2Q9H9L4 492 aa18.34■□□□□ 0.53
SSH1-204ENST00000546697 RBPJLQ9UBG7 517 aa18.34■□□□□ 0.53
SSH1-204ENST00000546697 SYNPO2Q9UMS6 1093 aa18.34■□□□□ 0.53
SSH1-204ENST00000546697 A0A0G2JMZ2 1700 aa18.33■□□□□ 0.52
SSH1-204ENST00000546697 IGKV6D-41A0A0C4DH26 115 aa18.33■□□□□ 0.52
SSH1-204ENST00000546697 FMNL1O95466 1100 aaPredicted RBP18.33■□□□□ 0.52
SSH1-204ENST00000546697 NBPF11Q86T75 865 aa18.33■□□□□ 0.52
SSH1-204ENST00000546697 PXYLP1Q8TE99 480 aa18.33■□□□□ 0.52
SSH1-204ENST00000546697 MYPNQ86TC9 1320 aa18.32■□□□□ 0.52
SSH1-204ENST00000546697 SLC9C1Q4G0N8 1177 aa18.32■□□□□ 0.52
SSH1-204ENST00000546697 FEZ1Q99689 392 aa18.32■□□□□ 0.52
SSH1-204ENST00000546697 NACAP1Q9BZK3 213 aa18.32■□□□□ 0.52
SSH1-204ENST00000546697 SH2D4AQ9H788 454 aa18.32■□□□□ 0.52
SSH1-204ENST00000546697 TXNRD2Q9NNW7 524 aa18.32■□□□□ 0.52
SSH1-204ENST00000546697 ANAPC4Q9UJX5 808 aa18.32■□□□□ 0.52
SSH1-204ENST00000546697 GJD2Q9UKL4 321 aa18.32■□□□□ 0.52
SSH1-204ENST00000546697 RABGAP1Q9Y3P9 1069 aa18.32■□□□□ 0.52
SSH1-204ENST00000546697 FGRP09769 529 aa18.31■□□□□ 0.52
SSH1-204ENST00000546697 ICA1Q05084 483 aa18.31■□□□□ 0.52
SSH1-204ENST00000546697 PRKCZQ05513 592 aa18.31■□□□□ 0.52
SSH1-204ENST00000546697 VCPKMTQ9H867 229 aa18.31■□□□□ 0.52
SSH1-204ENST00000546697 ZNF287Q9HBT7 754 aa18.31■□□□□ 0.52
SSH1-204ENST00000546697 ARHGEF10LQ9HCE6 1279 aa18.31■□□□□ 0.52
SSH1-204ENST00000546697 NYAP2Q9P242 653 aa18.31■□□□□ 0.52
SSH1-204ENST00000546697 PLXNB2O15031 1838 aa18.3■□□□□ 0.52
SSH1-204ENST00000546697 TNPO2O14787 897 aaKnown RBP18.3■□□□□ 0.52
SSH1-204ENST00000546697 CNMDO75829 334 aa18.3■□□□□ 0.52
SSH1-204ENST00000546697 TDO2P48775 406 aa18.3■□□□□ 0.52
SSH1-204ENST00000546697 ERVK-9P63128 1117 aa18.3■□□□□ 0.52
SSH1-204ENST00000546697 ERVK-24P63145 666 aa18.3■□□□□ 0.52
SSH1-204ENST00000546697 MLLT1Q03111 559 aaPredicted RBP18.3■□□□□ 0.52
SSH1-204ENST00000546697 MCMDC2Q4G0Z9 681 aa18.3■□□□□ 0.52
SSH1-204ENST00000546697 B4GALNT3Q6L9W6 998 aa18.3■□□□□ 0.52
SSH1-204ENST00000546697 SLAIN1Q8ND83 568 aa18.3■□□□□ 0.52
SSH1-204ENST00000546697 GPRC5AQ8NFJ5 357 aa18.3■□□□□ 0.52
SSH1-204ENST00000546697 MKL1Q969V6 931 aa18.3■□□□□ 0.52
SSH1-204ENST00000546697 GABRQQ9UN88 632 aa18.3■□□□□ 0.52
SSH1-204ENST00000546697 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.3■□□□□ 0.52
SSH1-204ENST00000546697 PARP14Q460N5 1801 aa18.3■□□□□ 0.52
SSH1-204ENST00000546697 DOCK3Q8IZD9 2030 aa18.3■□□□□ 0.52
SSH1-204ENST00000546697 KIAA0100Q14667 2235 aaKnown RBP18.3■□□□□ 0.52
SSH1-204ENST00000546697 SPDYE16A6NNV3 312 aaPredicted RBP18.29■□□□□ 0.52
SSH1-204ENST00000546697 MPHOSPH10O00566 681 aaKnown RBP18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms