RNA–Protein interactions for RNA: ENST00000546561.2

TSPAN8-203, Transcript of tetraspanin 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN8, Length 1,168 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN8-203ENST00000546561 RAD17O75943 681 aa9.17□□□□□ -0.94
TSPAN8-203ENST00000546561 HLA-DOAP06340 250 aa9.17□□□□□ -0.94
TSPAN8-203ENST00000546561 RHBDL3P58872 404 aa9.17□□□□□ -0.94
TSPAN8-203ENST00000546561 EXOSC10Q01780 885 aaKnown RBP9.17□□□□□ -0.94
TSPAN8-203ENST00000546561 TOB2Q14106 344 aaPredicted RBP9.17□□□□□ -0.94
TSPAN8-203ENST00000546561 CCDC178Q5BJE1 867 aa9.17□□□□□ -0.94
TSPAN8-203ENST00000546561 RRP12Q5JTH9 1297 aaKnown RBP9.17□□□□□ -0.94
TSPAN8-203ENST00000546561 TTC6Q86TZ1 520 aa9.17□□□□□ -0.94
TSPAN8-203ENST00000546561 IQCA1Q86XH1 822 aa9.17□□□□□ -0.94
TSPAN8-203ENST00000546561 MAPKAPK5Q8IW41 473 aa9.17□□□□□ -0.94
TSPAN8-203ENST00000546561 BRF1Q92994 677 aa9.17□□□□□ -0.94
TSPAN8-203ENST00000546561 UBAC1Q9BSL1 405 aa9.17□□□□□ -0.94
TSPAN8-203ENST00000546561 MXD3Q9BW11 206 aa9.17□□□□□ -0.94
TSPAN8-203ENST00000546561 AGXT2Q9BYV1 514 aa9.17□□□□□ -0.94
TSPAN8-203ENST00000546561 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.17□□□□□ -0.94
TSPAN8-203ENST00000546561 USP40Q9NVE5 1235 aa9.17□□□□□ -0.94
TSPAN8-203ENST00000546561 ANGEL1Q9UNK9 670 aaKnown RBP9.17□□□□□ -0.94
TSPAN8-203ENST00000546561 COL2A1P02458 1487 aaPredicted RBP9.16□□□□□ -0.94
TSPAN8-203ENST00000546561 POTECB2RU33 542 aa9.16□□□□□ -0.94
TSPAN8-203ENST00000546561 MYO1BO43795 1136 aa9.16□□□□□ -0.94
TSPAN8-203ENST00000546561 ORC4O43929 436 aa9.16□□□□□ -0.94
TSPAN8-203ENST00000546561 DHX16O60231 1041 aaKnown RBP9.16□□□□□ -0.94
TSPAN8-203ENST00000546561 KDM4AO75164 1064 aa9.16□□□□□ -0.94
TSPAN8-203ENST00000546561 USP17L8P0C7I0 530 aa9.16□□□□□ -0.94
TSPAN8-203ENST00000546561 PDIA4P13667 645 aaKnown RBP9.16□□□□□ -0.94
TSPAN8-203ENST00000546561 LMNB1P20700 586 aa9.16□□□□□ -0.94
TSPAN8-203ENST00000546561 COL9A1P20849 921 aa9.16□□□□□ -0.94
TSPAN8-203ENST00000546561 RASSF7Q02833 373 aa9.16□□□□□ -0.94
TSPAN8-203ENST00000546561 PKDCCQ504Y2 493 aa9.16□□□□□ -0.94
TSPAN8-203ENST00000546561 TJAP1Q5JTD0 557 aa9.16□□□□□ -0.94
TSPAN8-203ENST00000546561 C12orf60Q5U649 245 aa9.16□□□□□ -0.94
TSPAN8-203ENST00000546561 SYNE3Q6ZMZ3 975 aa9.16□□□□□ -0.94
TSPAN8-203ENST00000546561 NFXL1Q6ZNB6 911 aa9.16□□□□□ -0.94
TSPAN8-203ENST00000546561 TMTC2Q8N394 836 aa9.16□□□□□ -0.94
TSPAN8-203ENST00000546561 TCEANC2Q96MN5 208 aa9.16□□□□□ -0.94
TSPAN8-203ENST00000546561 MKNK2Q9HBH9 465 aa9.16□□□□□ -0.94
TSPAN8-203ENST00000546561 KCNQ5Q9NR82 932 aa9.16□□□□□ -0.94
TSPAN8-203ENST00000546561 MKRN1Q9UHC7 482 aaKnown RBP9.16□□□□□ -0.94
TSPAN8-203ENST00000546561 SMC3Q9UQE7 1217 aa9.16□□□□□ -0.94
TSPAN8-203ENST00000546561 KIF3AQ9Y496 699 aa9.16□□□□□ -0.94
TSPAN8-203ENST00000546561 CCDC69A6NI79 296 aa9.15□□□□□ -0.94
TSPAN8-203ENST00000546561 SH2B2O14492 632 aaPredicted RBP9.15□□□□□ -0.94
TSPAN8-203ENST00000546561 IFIT3O14879 490 aaKnown RBP9.15□□□□□ -0.94
TSPAN8-203ENST00000546561 RANBP6O60518 1105 aaKnown RBP9.15□□□□□ -0.94
TSPAN8-203ENST00000546561 FGRP09769 529 aa9.15□□□□□ -0.94
TSPAN8-203ENST00000546561 LIFRP42702 1097 aa9.15□□□□□ -0.94
TSPAN8-203ENST00000546561 NUCB2P80303 420 aa9.15□□□□□ -0.94
TSPAN8-203ENST00000546561 CXCL9Q07325 125 aa9.15□□□□□ -0.94
TSPAN8-203ENST00000546561 PICALMQ13492 652 aa9.15□□□□□ -0.94
TSPAN8-203ENST00000546561 WTAPQ15007 396 aa9.15□□□□□ -0.94
TSPAN8-203ENST00000546561 DLGAP5Q15398 846 aa9.15□□□□□ -0.94
TSPAN8-203ENST00000546561 CFAP100Q494V2 611 aa9.15□□□□□ -0.94
TSPAN8-203ENST00000546561 TMEM67Q5HYA8 995 aa9.15□□□□□ -0.94
TSPAN8-203ENST00000546561 APOBEC3HQ6NTF7 200 aaKnown RBP9.15□□□□□ -0.94
TSPAN8-203ENST00000546561 CDC42EP5Q6NZY7 148 aa9.15□□□□□ -0.94
TSPAN8-203ENST00000546561 ARHGAP27Q6ZUM4 889 aa9.15□□□□□ -0.94
TSPAN8-203ENST00000546561 CCDC83Q8IWF9 413 aa9.15□□□□□ -0.94
TSPAN8-203ENST00000546561 GTF3C6Q969F1 213 aa9.15□□□□□ -0.94
TSPAN8-203ENST00000546561 ZNF274Q96GC6 653 aaPredicted RBP9.15□□□□□ -0.94
TSPAN8-203ENST00000546561 SYT17Q9BSW7 474 aa9.15□□□□□ -0.94
TSPAN8-203ENST00000546561 IDI2Q9BXS1 227 aa9.15□□□□□ -0.94
TSPAN8-203ENST00000546561 TRIM34Q9BYJ4 488 aa9.15□□□□□ -0.94
TSPAN8-203ENST00000546561 LRRC2Q9BYS8 371 aa9.15□□□□□ -0.94
TSPAN8-203ENST00000546561 OSBPL5Q9H0X9 879 aaPredicted RBP9.15□□□□□ -0.94
TSPAN8-203ENST00000546561 DHX36Q9H2U1 1008 aaKnown RBP9.15□□□□□ -0.94
TSPAN8-203ENST00000546561 SWAP70Q9UH65 585 aa9.15□□□□□ -0.94
TSPAN8-203ENST00000546561 TPCN1Q9ULQ1 816 aa9.15□□□□□ -0.94
TSPAN8-203ENST00000546561 NAP1L2Q9ULW6 460 aaPredicted RBP9.15□□□□□ -0.94
TSPAN8-203ENST00000546561 MYH6P13533 1939 aa9.15□□□□□ -0.95
TSPAN8-203ENST00000546561 KLF18A0A0U1RQI7 1052 aa9.14□□□□□ -0.95
TSPAN8-203ENST00000546561 TSPY2A6NKD2 308 aa9.14□□□□□ -0.95
TSPAN8-203ENST00000546561 GOLGA8BA8MQT2 603 aa9.14□□□□□ -0.95
TSPAN8-203ENST00000546561 FZD9O00144 591 aa9.14□□□□□ -0.95
TSPAN8-203ENST00000546561 PFKFB2O60825 505 aa9.14□□□□□ -0.95
TSPAN8-203ENST00000546561 ENTPD3O75355 529 aa9.14□□□□□ -0.95
TSPAN8-203ENST00000546561 WDHD1O75717 1129 aaPredicted RBP9.14□□□□□ -0.95
TSPAN8-203ENST00000546561 DGAT1O75907 488 aa9.14□□□□□ -0.95
TSPAN8-203ENST00000546561 CDKL5O76039 1030 aa9.14□□□□□ -0.95
TSPAN8-203ENST00000546561 RCAN1P53805 252 aa9.14□□□□□ -0.95
TSPAN8-203ENST00000546561 EVCP57679 992 aa9.14□□□□□ -0.95
TSPAN8-203ENST00000546561 ANTXR2P58335 489 aa9.14□□□□□ -0.95
TSPAN8-203ENST00000546561 APOBRQ0VD83 1088 aa9.14□□□□□ -0.95
TSPAN8-203ENST00000546561 ME3Q16798 604 aa9.14□□□□□ -0.95
TSPAN8-203ENST00000546561 RBM26Q5T8P6 1007 aaKnown RBP9.14□□□□□ -0.95
TSPAN8-203ENST00000546561 CPLX2Q6PUV4 134 aaKnown RBP9.14□□□□□ -0.95
TSPAN8-203ENST00000546561 C16orf86Q6ZW13 317 aa9.14□□□□□ -0.95
TSPAN8-203ENST00000546561 CHST3Q7LGC8 479 aa9.14□□□□□ -0.95
TSPAN8-203ENST00000546561 SGMS1Q86VZ5 419 aa9.14□□□□□ -0.95
TSPAN8-203ENST00000546561 ZNF444Q8N0Y2 327 aaPredicted RBP9.14□□□□□ -0.95
TSPAN8-203ENST00000546561 MTMR14Q8NCE2 650 aa9.14□□□□□ -0.95
TSPAN8-203ENST00000546561 GMLQ99445 158 aa9.14□□□□□ -0.95
TSPAN8-203ENST00000546561 LLPHQ9BRT6 129 aaKnown RBP9.14□□□□□ -0.95
TSPAN8-203ENST00000546561 CDHR5Q9HBB8 845 aa9.14□□□□□ -0.95
TSPAN8-203ENST00000546561 ZSWIM5Q9P217 1185 aa9.14□□□□□ -0.95
TSPAN8-203ENST00000546561 SAP30BPQ9UHR5 308 aaKnown RBP9.14□□□□□ -0.95
TSPAN8-203ENST00000546561 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.14□□□□□ -0.95
TSPAN8-203ENST00000546561 TNKSO95271 1327 aa9.13□□□□□ -0.95
TSPAN8-203ENST00000546561 SIPA1L1O43166 1804 aa9.13□□□□□ -0.95
TSPAN8-203ENST00000546561 CYP2D7A0A087X1C5 515 aa9.13□□□□□ -0.95
TSPAN8-203ENST00000546561 CPLX1O14810 134 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms