RNA–Protein interactions for RNA: ENST00000546337.1

SCRIB-208, Transcript of scribbled planar cell polarity protein, humanhuman

TSL 3

Gene SCRIB, Length 516 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRIB-208ENST00000546337 SLC44A5Q8NCS7 719 aa18.68■□□□□ 0.58
SCRIB-208ENST00000546337 PARK7Q99497 189 aaKnown RBP18.68■□□□□ 0.58
SCRIB-208ENST00000546337 SYNPO2Q9UMS6 1093 aa18.68■□□□□ 0.58
SCRIB-208ENST00000546337 MPHOSPH10O00566 681 aaKnown RBP18.67■□□□□ 0.58
SCRIB-208ENST00000546337 FKTNO75072 461 aa18.67■□□□□ 0.58
SCRIB-208ENST00000546337 RASA1P20936 1047 aa18.67■□□□□ 0.58
SCRIB-208ENST00000546337 CRHR2Q13324 411 aa18.67■□□□□ 0.58
SCRIB-208ENST00000546337 SEPT2Q15019 361 aa18.67■□□□□ 0.58
SCRIB-208ENST00000546337 GADL1Q6ZQY3 521 aa18.67■□□□□ 0.58
SCRIB-208ENST00000546337 ARHGEF10LQ9HCE6 1279 aa18.67■□□□□ 0.58
SCRIB-208ENST00000546337 ORC4O43929 436 aa18.66■□□□□ 0.58
SCRIB-208ENST00000546337 AKR1B1P15121 316 aa18.66■□□□□ 0.58
SCRIB-208ENST00000546337 HMGCS2P54868 508 aa18.66■□□□□ 0.58
SCRIB-208ENST00000546337 EVX2Q03828 476 aa18.66■□□□□ 0.58
SCRIB-208ENST00000546337 RNF41Q9H4P4 317 aaPredicted RBP18.66■□□□□ 0.58
SCRIB-208ENST00000546337 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.66■□□□□ 0.58
SCRIB-208ENST00000546337 TMX2Q9Y320 296 aa18.66■□□□□ 0.58
SCRIB-208ENST00000546337 BAZ2AQ9UIF9 1905 aaKnown RBP18.65■□□□□ 0.58
SCRIB-208ENST00000546337 OSBPP22059 807 aa18.65■□□□□ 0.58
SCRIB-208ENST00000546337 MTMR2Q13614 643 aa18.65■□□□□ 0.58
SCRIB-208ENST00000546337 CCDC84Q86UT8 332 aaPredicted RBP18.65■□□□□ 0.58
SCRIB-208ENST00000546337 NEDD1Q8NHV4 660 aa18.65■□□□□ 0.58
SCRIB-208ENST00000546337 GTF3C2Q8WUA4 911 aaPredicted RBP18.65■□□□□ 0.58
SCRIB-208ENST00000546337 LPAR1Q92633 364 aa18.65■□□□□ 0.58
SCRIB-208ENST00000546337 NYAP2Q9P242 653 aa18.65■□□□□ 0.58
SCRIB-208ENST00000546337 ZNF213O14771 459 aa18.64■□□□□ 0.57
SCRIB-208ENST00000546337 SGSM2O43147 1006 aa18.64■□□□□ 0.57
SCRIB-208ENST00000546337 GCLCP48506 637 aaPredicted RBP18.64■□□□□ 0.57
SCRIB-208ENST00000546337 SP3Q02447 781 aa18.64■□□□□ 0.57
SCRIB-208ENST00000546337 ICA1Q05084 483 aa18.64■□□□□ 0.57
SCRIB-208ENST00000546337 C17orf99Q6UX52 265 aa18.64■□□□□ 0.57
SCRIB-208ENST00000546337 ZNF296Q8WUU4 475 aaPredicted RBP18.64■□□□□ 0.57
SCRIB-208ENST00000546337 MKL1Q969V6 931 aa18.64■□□□□ 0.57
SCRIB-208ENST00000546337 ERO1AQ96HE7 468 aa18.64■□□□□ 0.57
SCRIB-208ENST00000546337 FEZ1Q99689 392 aa18.64■□□□□ 0.57
SCRIB-208ENST00000546337 EMILIN3Q9NT22 766 aa18.64■□□□□ 0.57
SCRIB-208ENST00000546337 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.64■□□□□ 0.57
SCRIB-208ENST00000546337 TSKSQ9UJT2 592 aa18.64■□□□□ 0.57
SCRIB-208ENST00000546337 PHIPQ8WWQ0 1821 aa18.63■□□□□ 0.57
SCRIB-208ENST00000546337 SMIM22K7EJ46 135 aa18.63■□□□□ 0.57
SCRIB-208ENST00000546337 PKN2Q16513 984 aaKnown RBP18.63■□□□□ 0.57
SCRIB-208ENST00000546337 SHROOM1Q2M3G4 852 aaPredicted RBP18.63■□□□□ 0.57
SCRIB-208ENST00000546337 CASC1Q6TDU7 716 aa18.63■□□□□ 0.57
SCRIB-208ENST00000546337 PLIN4Q96Q06 1357 aa18.63■□□□□ 0.57
SCRIB-208ENST00000546337 IGKV6D-41A0A0C4DH26 115 aa18.62■□□□□ 0.57
SCRIB-208ENST00000546337 USP17L15C9J2P7 530 aa18.62■□□□□ 0.57
SCRIB-208ENST00000546337 USP17L13C9JLJ4 530 aa18.62■□□□□ 0.57
SCRIB-208ENST00000546337 USP17L11C9JVI0 530 aa18.62■□□□□ 0.57
SCRIB-208ENST00000546337 USP17L18D6R9N7 530 aa18.62■□□□□ 0.57
SCRIB-208ENST00000546337 USP17L22D6RA61 530 aa18.62■□□□□ 0.57
SCRIB-208ENST00000546337 USP17L17D6RBQ6 530 aa18.62■□□□□ 0.57
SCRIB-208ENST00000546337 USP17L19D6RCP7 530 aa18.62■□□□□ 0.57
SCRIB-208ENST00000546337 USP17L20D6RJB6 530 aa18.62■□□□□ 0.57
SCRIB-208ENST00000546337 TSPY3P0CV98 308 aa18.62■□□□□ 0.57
SCRIB-208ENST00000546337 TSPY8P0CW00 308 aa18.62■□□□□ 0.57
SCRIB-208ENST00000546337 USP17L24Q0WX57 530 aa18.62■□□□□ 0.57
SCRIB-208ENST00000546337 SIAH1Q8IUQ4 282 aa18.62■□□□□ 0.57
SCRIB-208ENST00000546337 ACER1Q8TDN7 264 aa18.62■□□□□ 0.57
SCRIB-208ENST00000546337 STAG1Q8WVM7 1258 aa18.62■□□□□ 0.57
SCRIB-208ENST00000546337 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.62■□□□□ 0.57
SCRIB-208ENST00000546337 R3HDMLQ9H3Y0 253 aa18.62■□□□□ 0.57
SCRIB-208ENST00000546337 ADGRA2Q96PE1 1338 aa18.61■□□□□ 0.57
SCRIB-208ENST00000546337 GNRH1P01148 92 aa18.61■□□□□ 0.57
SCRIB-208ENST00000546337 TFAP4Q01664 338 aa18.61■□□□□ 0.57
SCRIB-208ENST00000546337 IMMTQ16891 758 aaKnown RBP18.61■□□□□ 0.57
SCRIB-208ENST00000546337 CCDC178Q5BJE1 867 aa18.61■□□□□ 0.57
SCRIB-208ENST00000546337 AKNAD1Q5T1N1 836 aa18.61■□□□□ 0.57
SCRIB-208ENST00000546337 MFSD6Q6ZSS7 791 aa18.61■□□□□ 0.57
SCRIB-208ENST00000546337 KIAA1211Q6ZU35 1233 aa18.61■□□□□ 0.57
SCRIB-208ENST00000546337 TCP11L1Q9NUJ3 509 aa18.61■□□□□ 0.57
SCRIB-208ENST00000546337 U3KPZ7 1027 aaPredicted RBP18.61■□□□□ 0.57
SCRIB-208ENST00000546337 ATAD5Q96QE3 1844 aa18.6■□□□□ 0.57
SCRIB-208ENST00000546337 A0A1W2PRG0 241 aa18.6■□□□□ 0.57
SCRIB-208ENST00000546337 EEF2P13639 858 aaKnown RBP18.6■□□□□ 0.57
SCRIB-208ENST00000546337 IRX3P78415 501 aaPredicted RBP18.6■□□□□ 0.57
SCRIB-208ENST00000546337 CTDSPL2Q05D32 466 aa18.6■□□□□ 0.57
SCRIB-208ENST00000546337 KIF22Q14807 665 aa18.6■□□□□ 0.57
SCRIB-208ENST00000546337 TREML2Q5T2D2 321 aa18.6■□□□□ 0.57
SCRIB-208ENST00000546337 CATSPERGQ6ZRH7 1159 aa18.6■□□□□ 0.57
SCRIB-208ENST00000546337 CTU1Q7Z7A3 348 aaKnown RBP18.6■□□□□ 0.57
SCRIB-208ENST00000546337 MAP4K1Q92918 833 aa18.6■□□□□ 0.57
SCRIB-208ENST00000546337 ASCC2Q9H1I8 757 aaPredicted RBP18.6■□□□□ 0.57
SCRIB-208ENST00000546337 VCPKMTQ9H867 229 aa18.6■□□□□ 0.57
SCRIB-208ENST00000546337 MTMR4Q9NYA4 1195 aa18.6■□□□□ 0.57
SCRIB-208ENST00000546337 HOXC10Q9NYD6 342 aa18.6■□□□□ 0.57
SCRIB-208ENST00000546337 TSPY2A6NKD2 308 aa18.59■□□□□ 0.57
SCRIB-208ENST00000546337 CDC45O75419 566 aa18.59■□□□□ 0.57
SCRIB-208ENST00000546337 PRDM1O75626 825 aa18.59■□□□□ 0.57
SCRIB-208ENST00000546337 TTLL1O95922 423 aa18.59■□□□□ 0.57
SCRIB-208ENST00000546337 BCRP11274 1271 aa18.59■□□□□ 0.57
SCRIB-208ENST00000546337 NOVP48745 357 aa18.59■□□□□ 0.57
SCRIB-208ENST00000546337 COL13A1Q5TAT6 717 aaPredicted RBP18.59■□□□□ 0.57
SCRIB-208ENST00000546337 LBX2Q6XYB7 198 aa18.59■□□□□ 0.57
SCRIB-208ENST00000546337 SMCR8Q8TEV9 937 aaPredicted RBP18.59■□□□□ 0.57
SCRIB-208ENST00000546337 TTC14Q96N46 770 aa18.59■□□□□ 0.57
SCRIB-208ENST00000546337 ESYT1Q9BSJ8 1104 aa18.59■□□□□ 0.57
SCRIB-208ENST00000546337 CNNM2Q9H8M5 875 aa18.59■□□□□ 0.57
SCRIB-208ENST00000546337 GOPCQ9HD26 462 aa18.59■□□□□ 0.57
SCRIB-208ENST00000546337 WDR46O15213 610 aaKnown RBP18.58■□□□□ 0.56
SCRIB-208ENST00000546337 VCAM1P19320 739 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms