RNA–Protein interactions for RNA: ENST00000546229.5

COPS7A-221, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-221ENST00000546229 BMP8BP34820 402 aa15.33■□□□□ 0.04
COPS7A-221ENST00000546229 PLCD1P51178 756 aa15.33■□□□□ 0.04
COPS7A-221ENST00000546229 TMED8Q6PL24 325 aaPredicted RBP15.33■□□□□ 0.04
COPS7A-221ENST00000546229 USP17L2Q6R6M4 530 aa15.33■□□□□ 0.04
COPS7A-221ENST00000546229 CERS3Q8IU89 383 aa15.33■□□□□ 0.04
COPS7A-221ENST00000546229 ACER1Q8TDN7 264 aa15.33■□□□□ 0.04
COPS7A-221ENST00000546229 GTF3C2Q8WUA4 911 aaPredicted RBP15.33■□□□□ 0.04
COPS7A-221ENST00000546229 LRCH3Q96II8 777 aa15.33■□□□□ 0.04
COPS7A-221ENST00000546229 APBA2Q99767 749 aa15.33■□□□□ 0.04
COPS7A-221ENST00000546229 NUDT12Q9BQG2 462 aa15.33■□□□□ 0.04
COPS7A-221ENST00000546229 FLRT1Q9NZU1 646 aa15.33■□□□□ 0.04
COPS7A-221ENST00000546229 SERPINB13Q9UIV8 391 aa15.33■□□□□ 0.04
COPS7A-221ENST00000546229 EYSQ5T1H1 3165 aa15.33■□□□□ 0.04
COPS7A-221ENST00000546229 LTBP2Q14767 1821 aa15.33■□□□□ 0.04
COPS7A-221ENST00000546229 CCND3P30281 292 aaPredicted RBP15.32■□□□□ 0.04
COPS7A-221ENST00000546229 FTSJ3Q8IY81 847 aaKnown RBP15.32■□□□□ 0.04
COPS7A-221ENST00000546229 C7orf61Q8IZ16 206 aa15.32■□□□□ 0.04
COPS7A-221ENST00000546229 NBPF3Q9H094 633 aa15.32■□□□□ 0.04
COPS7A-221ENST00000546229 C11orf49Q9H6J7 331 aa15.32■□□□□ 0.04
COPS7A-221ENST00000546229 BTBD7Q9P203 1132 aa15.32■□□□□ 0.04
COPS7A-221ENST00000546229 RABGAP1Q9Y3P9 1069 aa15.32■□□□□ 0.04
COPS7A-221ENST00000546229 GREB1LQ9C091 1923 aaPredicted RBP15.31■□□□□ 0.04
COPS7A-221ENST00000546229 CDH23Q9H251 3354 aa15.31■□□□□ 0.04
COPS7A-221ENST00000546229 SPDYE16A6NNV3 312 aaPredicted RBP15.31■□□□□ 0.04
COPS7A-221ENST00000546229 ZKSCAN1P17029 563 aaPredicted RBP15.31■□□□□ 0.04
COPS7A-221ENST00000546229 CATSPERGQ6ZRH7 1159 aa15.31■□□□□ 0.04
COPS7A-221ENST00000546229 PLEKHH3Q7Z736 793 aa15.31■□□□□ 0.04
COPS7A-221ENST00000546229 SIRT2Q8IXJ6 389 aa15.31■□□□□ 0.04
COPS7A-221ENST00000546229 PANK1Q8TE04 598 aa15.31■□□□□ 0.04
COPS7A-221ENST00000546229 PAGR1Q9BTK6 254 aa15.31■□□□□ 0.04
COPS7A-221ENST00000546229 MYH7P12883 1935 aa15.31■□□□□ 0.04
COPS7A-221ENST00000546229 MYH8P13535 1937 aa15.31■□□□□ 0.04
COPS7A-221ENST00000546229 A0A1W2PRG0 241 aa15.3■□□□□ 0.04
COPS7A-221ENST00000546229 HOXC6P09630 235 aa15.3■□□□□ 0.04
COPS7A-221ENST00000546229 PDE6AP16499 860 aa15.3■□□□□ 0.04
COPS7A-221ENST00000546229 RGS2P41220 211 aa15.3■□□□□ 0.04
COPS7A-221ENST00000546229 HNRNPUQ00839 825 aaKnown RBP eCLIP15.3■□□□□ 0.04
COPS7A-221ENST00000546229 ZYXQ15942 572 aaKnown RBP15.3■□□□□ 0.04
COPS7A-221ENST00000546229 ZBED9Q6R2W3 1325 aa15.3■□□□□ 0.04
COPS7A-221ENST00000546229 AACSQ86V21 672 aa15.3■□□□□ 0.04
COPS7A-221ENST00000546229 TRMT44Q8IYL2 757 aaKnown RBP15.3■□□□□ 0.04
COPS7A-221ENST00000546229 RHPN1Q8TCX5 695 aa15.3■□□□□ 0.04
COPS7A-221ENST00000546229 BAZ2AQ9UIF9 1905 aaKnown RBP15.3■□□□□ 0.04
COPS7A-221ENST00000546229 ZMYND8Q9ULU4 1186 aaPredicted RBP15.3■□□□□ 0.04
COPS7A-221ENST00000546229 USP17L15C9J2P7 530 aa15.29■□□□□ 0.04
COPS7A-221ENST00000546229 USP17L13C9JLJ4 530 aa15.29■□□□□ 0.04
COPS7A-221ENST00000546229 USP17L11C9JVI0 530 aa15.29■□□□□ 0.04
COPS7A-221ENST00000546229 USP17L18D6R9N7 530 aa15.29■□□□□ 0.04
COPS7A-221ENST00000546229 USP17L22D6RA61 530 aa15.29■□□□□ 0.04
COPS7A-221ENST00000546229 USP17L17D6RBQ6 530 aa15.29■□□□□ 0.04
COPS7A-221ENST00000546229 USP17L19D6RCP7 530 aa15.29■□□□□ 0.04
COPS7A-221ENST00000546229 USP17L20D6RJB6 530 aa15.29■□□□□ 0.04
COPS7A-221ENST00000546229 MAGEA10P43363 369 aaPredicted RBP15.29■□□□□ 0.04
COPS7A-221ENST00000546229 USP5P45974 858 aa15.29■□□□□ 0.04
COPS7A-221ENST00000546229 USP17L24Q0WX57 530 aa15.29■□□□□ 0.04
COPS7A-221ENST00000546229 MAP3K12Q12852 859 aa15.29■□□□□ 0.04
COPS7A-221ENST00000546229 MAP2K5Q13163 448 aa15.29■□□□□ 0.04
COPS7A-221ENST00000546229 GRB14Q14449 540 aa15.29■□□□□ 0.04
COPS7A-221ENST00000546229 ABCB5Q2M3G0 1257 aa15.29■□□□□ 0.04
COPS7A-221ENST00000546229 CERKLQ49MI3 558 aaPredicted RBP15.29■□□□□ 0.04
COPS7A-221ENST00000546229 KIAA1755Q5JYT7 1200 aa15.29■□□□□ 0.04
COPS7A-221ENST00000546229 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.29■□□□□ 0.04
COPS7A-221ENST00000546229 TRIM34Q9BYJ4 488 aa15.29■□□□□ 0.04
COPS7A-221ENST00000546229 IL1RAPL2Q9NP60 686 aa15.29■□□□□ 0.04
COPS7A-221ENST00000546229 SMIM22K7EJ46 135 aa15.28■□□□□ 0.04
COPS7A-221ENST00000546229 PTPREP23469 700 aa15.28■□□□□ 0.04
COPS7A-221ENST00000546229 PDE3AQ14432 1141 aa15.28■□□□□ 0.04
COPS7A-221ENST00000546229 LRRC26Q2I0M4 334 aa15.28■□□□□ 0.04
COPS7A-221ENST00000546229 ERC1Q8IUD2 1116 aa15.28■□□□□ 0.04
COPS7A-221ENST00000546229 SIAH1Q8IUQ4 282 aa15.28■□□□□ 0.04
COPS7A-221ENST00000546229 LCORLQ8N3X6 602 aa15.28■□□□□ 0.04
COPS7A-221ENST00000546229 TRPV1Q8NER1 839 aa15.28■□□□□ 0.04
COPS7A-221ENST00000546229 RPAP3Q9H6T3 665 aaPredicted RBP15.28■□□□□ 0.04
COPS7A-221ENST00000546229 COL11A1P12107 1806 aaPredicted RBP15.27■□□□□ 0.04
COPS7A-221ENST00000546229 ZNF532Q9HCE3 1301 aa15.27■□□□□ 0.04
COPS7A-221ENST00000546229 CYP2D6P10635 497 aa15.27■□□□□ 0.04
COPS7A-221ENST00000546229 SYN1P17600 705 aa15.27■□□□□ 0.04
COPS7A-221ENST00000546229 USP14P54578 494 aa15.27■□□□□ 0.04
COPS7A-221ENST00000546229 SEPT2Q15019 361 aa15.27■□□□□ 0.04
COPS7A-221ENST00000546229 RAB3GAP1Q15042 981 aa15.27■□□□□ 0.04
COPS7A-221ENST00000546229 LRIT3Q3SXY7 679 aa15.27■□□□□ 0.04
COPS7A-221ENST00000546229 TTC6Q86TZ1 520 aa15.27■□□□□ 0.04
COPS7A-221ENST00000546229 MIER1Q8N108 512 aa15.27■□□□□ 0.04
COPS7A-221ENST00000546229 SLC44A5Q8NCS7 719 aa15.27■□□□□ 0.04
COPS7A-221ENST00000546229 NPLOC4Q8TAT6 608 aa15.27■□□□□ 0.04
COPS7A-221ENST00000546229 EDC3Q96F86 508 aaKnown RBP15.27■□□□□ 0.04
COPS7A-221ENST00000546229 FEZ1Q99689 392 aa15.27■□□□□ 0.04
COPS7A-221ENST00000546229 DCP1AQ9NPI6 582 aaPredicted RBP15.27■□□□□ 0.04
COPS7A-221ENST00000546229 SPTBN5Q9NRC6 3674 aaKnown RBP15.27■□□□□ 0.03
COPS7A-221ENST00000546229 MAGEB6P1A0A0J9YX57 407 aa15.26■□□□□ 0.03
COPS7A-221ENST00000546229 SLC15A5A6NIM6 579 aa15.26■□□□□ 0.03
COPS7A-221ENST00000546229 CHGBP05060 677 aa15.26■□□□□ 0.03
COPS7A-221ENST00000546229 SLFNL1Q499Z3 407 aa15.26■□□□□ 0.03
COPS7A-221ENST00000546229 GPR153Q6NV75 609 aa15.26■□□□□ 0.03
COPS7A-221ENST00000546229 SDR42E1Q8WUS8 393 aa15.26■□□□□ 0.03
COPS7A-221ENST00000546229 ZBTB40Q9NUA8 1239 aa15.26■□□□□ 0.03
COPS7A-221ENST00000546229 VCANP13611 3396 aa15.25■□□□□ 0.03
COPS7A-221ENST00000546229 CYBAP13498 195 aa15.25■□□□□ 0.03
COPS7A-221ENST00000546229 SLC9C2Q5TAH2 1124 aa15.25■□□□□ 0.03
COPS7A-221ENST00000546229 CLEC10AQ8IUN9 316 aa15.25■□□□□ 0.03
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