RNA–Protein interactions for RNA: ENST00000546215.5

SCARB1-211, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARB1, Length 1,597 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-211ENST00000546215 BRI3BPQ8WY22 251 aa24.62■■□□□ 1.53
SCARB1-211ENST00000546215 PTPN18Q99952 460 aa24.62■■□□□ 1.53
SCARB1-211ENST00000546215 KANSL2Q9H9L4 492 aa24.62■■□□□ 1.53
SCARB1-211ENST00000546215 TAF6LQ9Y6J9 622 aa24.62■■□□□ 1.53
SCARB1-211ENST00000546215 NEDD4P46934 1319 aa24.62■■□□□ 1.53
SCARB1-211ENST00000546215 CCL15-CCL14A0A0B4J2E2 113 aa24.61■■□□□ 1.53
SCARB1-211ENST00000546215 RANBP6O60518 1105 aaKnown RBP24.61■■□□□ 1.53
SCARB1-211ENST00000546215 TSPY3P0CV98 308 aa24.61■■□□□ 1.53
SCARB1-211ENST00000546215 TSPY8P0CW00 308 aa24.61■■□□□ 1.53
SCARB1-211ENST00000546215 BACE1P56817 501 aa24.61■■□□□ 1.53
SCARB1-211ENST00000546215 CCL15Q16663 113 aa24.61■■□□□ 1.53
SCARB1-211ENST00000546215 RRP12Q5JTH9 1297 aaKnown RBP24.61■■□□□ 1.53
SCARB1-211ENST00000546215 CLEC10AQ8IUN9 316 aa24.61■■□□□ 1.53
SCARB1-211ENST00000546215 ACER1Q8TDN7 264 aa24.61■■□□□ 1.53
SCARB1-211ENST00000546215 TOMM22Q9NS69 142 aa24.61■■□□□ 1.53
SCARB1-211ENST00000546215 PLIN4Q96Q06 1357 aa24.61■■□□□ 1.53
SCARB1-211ENST00000546215 USP17L10C9JJH3 530 aa24.6■■□□□ 1.53
SCARB1-211ENST00000546215 REC8O95072 547 aa24.6■■□□□ 1.53
SCARB1-211ENST00000546215 ICA1Q05084 483 aa24.6■■□□□ 1.53
SCARB1-211ENST00000546215 A0A1W2PRG0 241 aa24.59■■□□□ 1.53
SCARB1-211ENST00000546215 TSPY2A6NKD2 308 aa24.59■■□□□ 1.53
SCARB1-211ENST00000546215 MAP2K1Q02750 393 aaPredicted RBP24.59■■□□□ 1.53
SCARB1-211ENST00000546215 MTMR2Q13614 643 aa24.59■■□□□ 1.53
SCARB1-211ENST00000546215 SH3D19Q5HYK7 790 aa24.59■■□□□ 1.53
SCARB1-211ENST00000546215 CREB3L3Q68CJ9 461 aa24.59■■□□□ 1.53
SCARB1-211ENST00000546215 IGF2BP3O00425 579 aaKnown RBP eCLIP24.59■■□□□ 1.533e-8■■■■□ 21.1
SCARB1-211ENST00000546215 SLC27A2O14975 620 aa24.59■■□□□ 1.53
SCARB1-211ENST00000546215 IFNL1Q8IU54 200 aa24.59■■□□□ 1.53
SCARB1-211ENST00000546215 CEP95Q96GE4 821 aa24.59■■□□□ 1.53
SCARB1-211ENST00000546215 C19orf81C9J6K1 198 aa24.58■■□□□ 1.52
SCARB1-211ENST00000546215 EEF2P13639 858 aaKnown RBP24.58■■□□□ 1.52
SCARB1-211ENST00000546215 NT5C2P49902 561 aa24.58■■□□□ 1.52
SCARB1-211ENST00000546215 HMGCS2P54868 508 aa24.58■■□□□ 1.52
SCARB1-211ENST00000546215 KIAA1683Q9H0B3 1180 aa24.58■■□□□ 1.52
SCARB1-211ENST00000546215 IL17RBQ9NRM6 502 aa24.58■■□□□ 1.52
SCARB1-211ENST00000546215 WBP1LQ9NX94 342 aa24.58■■□□□ 1.52
SCARB1-211ENST00000546215 MTMR4Q9NYA4 1195 aa24.58■■□□□ 1.52
SCARB1-211ENST00000546215 E7EWF7 191 aa24.57■■□□□ 1.52
SCARB1-211ENST00000546215 DGKZQ13574 1117 aa24.57■■□□□ 1.52
SCARB1-211ENST00000546215 STOX1Q6ZVD7 989 aa24.57■■□□□ 1.52
SCARB1-211ENST00000546215 FASTKD5Q7L8L6 764 aaKnown RBP24.57■■□□□ 1.52
SCARB1-211ENST00000546215 ESR2Q92731 530 aa24.57■■□□□ 1.52
SCARB1-211ENST00000546215 CNNM2Q9H8M5 875 aa24.57■■□□□ 1.52
SCARB1-211ENST00000546215 B4E1Z4 1266 aa24.56■■□□□ 1.52
SCARB1-211ENST00000546215 BTBD19C9JJ37 291 aa24.56■■□□□ 1.52
SCARB1-211ENST00000546215 GPAT2Q6NUI2 795 aa24.56■■□□□ 1.52
SCARB1-211ENST00000546215 FAM43AQ8N2R8 423 aa24.56■■□□□ 1.52
SCARB1-211ENST00000546215 PROCA1Q8NCQ7 364 aaPredicted RBP24.56■■□□□ 1.52
SCARB1-211ENST00000546215 FEZ1Q99689 392 aa24.56■■□□□ 1.52
SCARB1-211ENST00000546215 KRT23Q9C075 422 aa24.56■■□□□ 1.52
SCARB1-211ENST00000546215 ARHGEF10LQ9HCE6 1279 aa24.56■■□□□ 1.52
SCARB1-211ENST00000546215 EMILIN3Q9NT22 766 aa24.56■■□□□ 1.52
SCARB1-211ENST00000546215 NYAP2Q9P242 653 aa24.56■■□□□ 1.52
SCARB1-211ENST00000546215 TMX2Q9Y320 296 aa24.56■■□□□ 1.52
SCARB1-211ENST00000546215 EPB41L2O43491 1005 aaKnown RBP24.55■■□□□ 1.52
SCARB1-211ENST00000546215 NMT2O60551 498 aa24.55■■□□□ 1.52
SCARB1-211ENST00000546215 KDM4AO75164 1064 aa24.55■■□□□ 1.52
SCARB1-211ENST00000546215 GADL1Q6ZQY3 521 aa24.55■■□□□ 1.52
SCARB1-211ENST00000546215 TCP11L1Q9NUJ3 509 aa24.55■■□□□ 1.52
SCARB1-211ENST00000546215 USP14P54578 494 aa24.54■■□□□ 1.52
SCARB1-211ENST00000546215 ATP2B2Q01814 1243 aa24.54■■□□□ 1.52
SCARB1-211ENST00000546215 USP17L2Q6R6M4 530 aa24.54■■□□□ 1.52
SCARB1-211ENST00000546215 C12orf42Q96LP6 360 aa24.54■■□□□ 1.52
SCARB1-211ENST00000546215 USP26Q9BXU7 913 aa24.54■■□□□ 1.52
SCARB1-211ENST00000546215 ZSWIM5Q9P217 1185 aa24.54■■□□□ 1.52
SCARB1-211ENST00000546215 LOC285556D6RIA3 1793 aa24.54■■□□□ 1.52
SCARB1-211ENST00000546215 TTLL1O95922 423 aa24.54■■□□□ 1.52
SCARB1-211ENST00000546215 NOVP48745 357 aa24.54■■□□□ 1.52
SCARB1-211ENST00000546215 ZYXQ15942 572 aaKnown RBP24.54■■□□□ 1.52
SCARB1-211ENST00000546215 C8orf34Q49A92 452 aa24.54■■□□□ 1.52
SCARB1-211ENST00000546215 RNF20Q5VTR2 975 aa24.54■■□□□ 1.52
SCARB1-211ENST00000546215 OTUD7BQ6GQQ9 843 aa24.54■■□□□ 1.52
SCARB1-211ENST00000546215 ANKRD23Q86SG2 305 aa24.54■■□□□ 1.52
SCARB1-211ENST00000546215 MKL1Q969V6 931 aa24.54■■□□□ 1.52
SCARB1-211ENST00000546215 RNF186Q9NXI6 227 aa24.54■■□□□ 1.52
SCARB1-211ENST00000546215 CLIP2Q9UDT6 1046 aa24.54■■□□□ 1.52
SCARB1-211ENST00000546215 HSPA4P34932 840 aa24.53■■□□□ 1.52
SCARB1-211ENST00000546215 TRDNQ13061 729 aa24.53■■□□□ 1.52
SCARB1-211ENST00000546215 TREML2Q5T2D2 321 aa24.53■■□□□ 1.52
SCARB1-211ENST00000546215 RASEFQ8IZ41 740 aa24.53■■□□□ 1.52
SCARB1-211ENST00000546215 SH2D4AQ9H788 454 aa24.53■■□□□ 1.52
SCARB1-211ENST00000546215 ZCCHC17Q9NP64 241 aaKnown RBP24.53■■□□□ 1.52
SCARB1-211ENST00000546215 TMOD4Q9NZQ9 345 aa24.53■■□□□ 1.52
SCARB1-211ENST00000546215 AGTPBP1Q9UPW5 1226 aa24.53■■□□□ 1.52
SCARB1-211ENST00000546215 ALDH1A1P00352 501 aa24.52■■□□□ 1.52
SCARB1-211ENST00000546215 TSGA10IPQ3SY00 556 aa24.52■■□□□ 1.52
SCARB1-211ENST00000546215 NCOA7Q8NI08 942 aa24.52■■□□□ 1.52
SCARB1-211ENST00000546215 KCNB2Q92953 911 aa24.52■■□□□ 1.52
SCARB1-211ENST00000546215 MYH4Q9Y623 1939 aa24.52■■□□□ 1.52
SCARB1-211ENST00000546215 KIAA1755Q5JYT7 1200 aa24.51■■□□□ 1.51
SCARB1-211ENST00000546215 PPP4R3BQ5MIZ7 849 aa24.51■■□□□ 1.51
SCARB1-211ENST00000546215 BEGAINQ9BUH8 593 aa24.51■■□□□ 1.51
SCARB1-211ENST00000546215 VCPKMTQ9H867 229 aa24.51■■□□□ 1.51
SCARB1-211ENST00000546215 STX8Q9UNK0 236 aa24.51■■□□□ 1.51
SCARB1-211ENST00000546215 PDHXO00330 501 aa24.5■■□□□ 1.51
SCARB1-211ENST00000546215 TRPA1O75762 1119 aa24.5■■□□□ 1.51
SCARB1-211ENST00000546215 SEC24BO95487 1268 aa24.5■■□□□ 1.51
SCARB1-211ENST00000546215 CYB5R4Q7L1T6 521 aa24.5■■□□□ 1.51
SCARB1-211ENST00000546215 RALYLQ86SE5 291 aaKnown RBP24.5■■□□□ 1.51
SCARB1-211ENST00000546215 ZKSCAN3Q9BRR0 538 aa24.5■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms