RNA–Protein interactions for RNA: ENST00000546079.5

CLPTM1-203, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2 BASIC

Gene CLPTM1, Length 2,342 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-203ENST00000546079 ANTXR2P58335 489 aa18.69■□□□□ 0.58
CLPTM1-203ENST00000546079 SETQ01105 290 aaPredicted RBP18.69■□□□□ 0.58
CLPTM1-203ENST00000546079 METTL22Q9BUU2 404 aaPredicted RBP18.69■□□□□ 0.58
CLPTM1-203ENST00000546079 A6NNZ2 444 aa18.68■□□□□ 0.58
CLPTM1-203ENST00000546079 PSMD14O00487 310 aa18.68■□□□□ 0.58
CLPTM1-203ENST00000546079 PIP4K2AP48426 406 aaPredicted RBP18.68■□□□□ 0.58
CLPTM1-203ENST00000546079 ERVK-24P63145 666 aa18.68■□□□□ 0.58
CLPTM1-203ENST00000546079 NKX1-1Q15270 411 aaPredicted RBP18.68■□□□□ 0.58
CLPTM1-203ENST00000546079 TUBB8Q3ZCM7 444 aa18.68■□□□□ 0.58
CLPTM1-203ENST00000546079 CDKAL1Q5VV42 579 aa18.68■□□□□ 0.58
CLPTM1-203ENST00000546079 CYP26C1Q6V0L0 522 aa18.68■□□□□ 0.58
CLPTM1-203ENST00000546079 NCOA7Q8NI08 942 aa18.68■□□□□ 0.58
CLPTM1-203ENST00000546079 SERTAD1Q9UHV2 236 aa18.68■□□□□ 0.58
CLPTM1-203ENST00000546079 GRIN2DO15399 1336 aa18.68■□□□□ 0.58
CLPTM1-203ENST00000546079 ZMYM6O95789 1325 aa18.68■□□□□ 0.58
CLPTM1-203ENST00000546079 POLR2DO15514 142 aaKnown RBP18.68■□□□□ 0.58
CLPTM1-203ENST00000546079 IL2RBP14784 551 aa18.68■□□□□ 0.58
CLPTM1-203ENST00000546079 CCNI2Q6ZMN8 369 aaPredicted RBP18.68■□□□□ 0.58
CLPTM1-203ENST00000546079 RAB11FIP4Q86YS3 637 aa18.68■□□□□ 0.58
CLPTM1-203ENST00000546079 CABS1Q96KC9 395 aa18.68■□□□□ 0.58
CLPTM1-203ENST00000546079 SELENOOQ9BVL4 669 aa18.68■□□□□ 0.58
CLPTM1-203ENST00000546079 GOLGA6BA6NDN3 693 aa18.67■□□□□ 0.58
CLPTM1-203ENST00000546079 MYCNP04198 464 aaPredicted RBP18.67■□□□□ 0.58
CLPTM1-203ENST00000546079 TRDNQ13061 729 aa18.67■□□□□ 0.58
CLPTM1-203ENST00000546079 STK11IPQ8N1F8 1099 aa18.67■□□□□ 0.58
CLPTM1-203ENST00000546079 SH3GL2Q99962 352 aa18.67■□□□□ 0.58
CLPTM1-203ENST00000546079 KCPQ6ZWJ8 1503 aa18.67■□□□□ 0.58
CLPTM1-203ENST00000546079 AFDNP55196 1824 aaKnown RBP18.67■□□□□ 0.58
CLPTM1-203ENST00000546079 M0R2C6 588 aa18.67■□□□□ 0.58
CLPTM1-203ENST00000546079 PTPREP23469 700 aa18.67■□□□□ 0.58
CLPTM1-203ENST00000546079 SPECC1Q5M775 1068 aa18.67■□□□□ 0.58
CLPTM1-203ENST00000546079 ANKRD13DQ6ZTN6 518 aa18.67■□□□□ 0.58
CLPTM1-203ENST00000546079 MMS19Q96T76 1030 aa18.67■□□□□ 0.58
CLPTM1-203ENST00000546079 NBPF3Q9H094 633 aa18.67■□□□□ 0.58
CLPTM1-203ENST00000546079 ABHD10Q9NUJ1 306 aa18.67■□□□□ 0.58
CLPTM1-203ENST00000546079 ERVV-2B6SEH9 535 aa18.66■□□□□ 0.58
CLPTM1-203ENST00000546079 C21orf2O43822 256 aa18.66■□□□□ 0.58
CLPTM1-203ENST00000546079 FNTAP49354 379 aa18.66■□□□□ 0.58
CLPTM1-203ENST00000546079 PAPD7Q5XG87 772 aaKnown RBP18.66■□□□□ 0.58
CLPTM1-203ENST00000546079 B4GALNT4Q76KP1 1039 aa18.66■□□□□ 0.58
CLPTM1-203ENST00000546079 ZNF579Q8NAF0 562 aaKnown RBP18.66■□□□□ 0.58
CLPTM1-203ENST00000546079 XAGE2Q96GT9 111 aa18.66■□□□□ 0.58
CLPTM1-203ENST00000546079 SAR1BQ9Y6B6 198 aa18.66■□□□□ 0.58
CLPTM1-203ENST00000546079 FOXP2O15409 715 aa18.66■□□□□ 0.58
CLPTM1-203ENST00000546079 HAND2P61296 217 aa18.66■□□□□ 0.58
CLPTM1-203ENST00000546079 AEBP2Q6ZN18 517 aaPredicted RBP18.66■□□□□ 0.58
CLPTM1-203ENST00000546079 RALYLQ86SE5 291 aaKnown RBP18.66■□□□□ 0.58
CLPTM1-203ENST00000546079 SPATS2Q86XZ4 545 aaKnown RBP18.66■□□□□ 0.58
CLPTM1-203ENST00000546079 MYD88Q99836 296 aa18.66■□□□□ 0.58
CLPTM1-203ENST00000546079 STRN4Q9NRL3 753 aa18.66■□□□□ 0.58
CLPTM1-203ENST00000546079 TOGARAM1Q9Y4F4 1720 aa18.65■□□□□ 0.58
CLPTM1-203ENST00000546079 FSBPO95073 299 aa18.65■□□□□ 0.58
CLPTM1-203ENST00000546079 GPTP24298 496 aa18.65■□□□□ 0.58
CLPTM1-203ENST00000546079 CKAP4Q07065 602 aaKnown RBP18.65■□□□□ 0.58
CLPTM1-203ENST00000546079 CUL4BQ13620 913 aa18.65■□□□□ 0.58
CLPTM1-203ENST00000546079 CPLX2Q6PUV4 134 aaKnown RBP18.65■□□□□ 0.58
CLPTM1-203ENST00000546079 AMOTL1Q8IY63 956 aa18.65■□□□□ 0.58
CLPTM1-203ENST00000546079 OSBP2Q969R2 916 aa18.65■□□□□ 0.58
CLPTM1-203ENST00000546079 GPR108Q9NPR9 543 aa18.65■□□□□ 0.58
CLPTM1-203ENST00000546079 FBXO2Q9UK22 296 aaPredicted RBP18.65■□□□□ 0.58
CLPTM1-203ENST00000546079 GOLGA8KD6RF30 607 aa18.65■□□□□ 0.58
CLPTM1-203ENST00000546079 ACTN4O43707 911 aaKnown RBP18.65■□□□□ 0.58
CLPTM1-203ENST00000546079 FGAP02671 866 aa18.65■□□□□ 0.58
CLPTM1-203ENST00000546079 GNGT1P63211 74 aa18.65■□□□□ 0.58
CLPTM1-203ENST00000546079 TRIM29Q14134 588 aa18.65■□□□□ 0.58
CLPTM1-203ENST00000546079 EHD4Q9H223 541 aa18.65■□□□□ 0.58
CLPTM1-203ENST00000546079 HAUS4Q9H6D7 363 aa18.65■□□□□ 0.58
CLPTM1-203ENST00000546079 CAPN7Q9Y6W3 813 aa18.65■□□□□ 0.58
CLPTM1-203ENST00000546079 SYNRGQ9UMZ2 1314 aa18.64■□□□□ 0.58
CLPTM1-203ENST00000546079 METAP2P50579 478 aaKnown RBP eCLIP18.64■□□□□ 0.57
CLPTM1-203ENST00000546079 GRAMD1CQ8IYS0 662 aa18.64■□□□□ 0.57
CLPTM1-203ENST00000546079 GDAP1L1Q96MZ0 367 aa18.64■□□□□ 0.57
CLPTM1-203ENST00000546079 NEUROD6Q96NK8 337 aa18.64■□□□□ 0.57
CLPTM1-203ENST00000546079 SLF1Q9BQI6 1058 aa18.64■□□□□ 0.57
CLPTM1-203ENST00000546079 FAM184BQ9ULE4 1060 aa18.64■□□□□ 0.57
CLPTM1-203ENST00000546079 TRIM14Q14142 442 aa18.63■□□□□ 0.57
CLPTM1-203ENST00000546079 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.63■□□□□ 0.57
CLPTM1-203ENST00000546079 JPH2Q9BR39 696 aaPredicted RBP18.63■□□□□ 0.57
CLPTM1-203ENST00000546079 GNL3LQ9NVN8 582 aaKnown RBP18.63■□□□□ 0.57
CLPTM1-203ENST00000546079 CCDC9Q9Y3X0 531 aaKnown RBP18.63■□□□□ 0.57
CLPTM1-203ENST00000546079 TNS2Q63HR2 1409 aa18.63■□□□□ 0.57
CLPTM1-203ENST00000546079 LRRC10BA6NIK2 292 aa18.63■□□□□ 0.57
CLPTM1-203ENST00000546079 NBPF26B4DH59 902 aa18.63■□□□□ 0.57
CLPTM1-203ENST00000546079 MYBL2P10244 700 aa18.63■□□□□ 0.57
CLPTM1-203ENST00000546079 SKOR1P84550 965 aa18.63■□□□□ 0.57
CLPTM1-203ENST00000546079 NBPF10Q6P3W6 841 aaKnown RBP18.63■□□□□ 0.57
CLPTM1-203ENST00000546079 NBPF15Q8N660 670 aa18.63■□□□□ 0.57
CLPTM1-203ENST00000546079 AENQ8WTP8 325 aaKnown RBP18.63■□□□□ 0.57
CLPTM1-203ENST00000546079 SEC31BQ9NQW1 1179 aa18.63■□□□□ 0.57
CLPTM1-203ENST00000546079 GUCA1BQ9UMX6 200 aa18.63■□□□□ 0.57
CLPTM1-203ENST00000546079 EPN1Q9Y6I3 576 aaPredicted RBP18.63■□□□□ 0.57
CLPTM1-203ENST00000546079 C4AP0C0L4 1744 aa18.62■□□□□ 0.57
CLPTM1-203ENST00000546079 C4BP0C0L5 1744 aa18.62■□□□□ 0.57
CLPTM1-203ENST00000546079 GRIN1Q05586 938 aa18.62■□□□□ 0.57
CLPTM1-203ENST00000546079 UBE3BQ7Z3V4 1068 aa18.62■□□□□ 0.57
CLPTM1-203ENST00000546079 NOSTRINQ8IVI9 506 aa18.62■□□□□ 0.57
CLPTM1-203ENST00000546079 HDAC6Q9UBN7 1215 aa18.62■□□□□ 0.57
CLPTM1-203ENST00000546079 ANGEL1Q9UNK9 670 aaKnown RBP18.62■□□□□ 0.57
CLPTM1-203ENST00000546079 REXO2Q9Y3B8 237 aaKnown RBP18.62■□□□□ 0.57
CLPTM1-203ENST00000546079 NDUFA10O95299 355 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms