RNA–Protein interactions for RNA: ENST00000545689.2

COL4A6-209, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-209ENST00000545689 MAGEA1P43355 309 aa13.94□□□□□ -0.18
COL4A6-209ENST00000545689 PNOCQ13519 176 aa13.94□□□□□ -0.18
COL4A6-209ENST00000545689 CUL4AQ13619 759 aa13.94□□□□□ -0.18
COL4A6-209ENST00000545689 CFAP221Q4G0U5 840 aa13.94□□□□□ -0.18
COL4A6-209ENST00000545689 IFT74Q96LB3 600 aa13.94□□□□□ -0.18
COL4A6-209ENST00000545689 TRPM1Q7Z4N2 1603 aa13.94□□□□□ -0.18
COL4A6-209ENST00000545689 GJC1P36383 396 aa13.94□□□□□ -0.18
COL4A6-209ENST00000545689 GPT2Q8TD30 523 aa13.94□□□□□ -0.18
COL4A6-209ENST00000545689 RTEL1Q9NZ71 1219 aa13.94□□□□□ -0.18
COL4A6-209ENST00000545689 SPOPO43791 374 aa13.93□□□□□ -0.18
COL4A6-209ENST00000545689 ATG3Q9NT62 314 aa13.93□□□□□ -0.18
COL4A6-209ENST00000545689 SPATA24Q86W54 205 aa13.93□□□□□ -0.18
COL4A6-209ENST00000545689 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.93□□□□□ -0.18
COL4A6-209ENST00000545689 MAIP1Q8WWC4 291 aa13.93□□□□□ -0.18
COL4A6-209ENST00000545689 CCDC114Q96M63 670 aa13.93□□□□□ -0.18
COL4A6-209ENST00000545689 USP28Q96RU2 1077 aa13.93□□□□□ -0.18
COL4A6-209ENST00000545689 ARHGAP31Q2M1Z3 1444 aa13.93□□□□□ -0.18
COL4A6-209ENST00000545689 ZEB2O60315 1214 aa13.93□□□□□ -0.18
COL4A6-209ENST00000545689 PDE6AP16499 860 aa13.93□□□□□ -0.18
COL4A6-209ENST00000545689 U2AF2P26368 475 aaKnown RBP eCLIP13.93□□□□□ -0.18
COL4A6-209ENST00000545689 POTEDQ86YR6 584 aa13.93□□□□□ -0.18
COL4A6-209ENST00000545689 PRDM1O75626 825 aa13.93□□□□□ -0.18
COL4A6-209ENST00000545689 MXRA7P84157 204 aa13.93□□□□□ -0.18
COL4A6-209ENST00000545689 KRBA2Q6ZNG9 492 aa13.93□□□□□ -0.18
COL4A6-209ENST00000545689 PLA2R1Q13018 1463 aa13.93□□□□□ -0.18
COL4A6-209ENST00000545689 BACH1O14867 736 aa13.93□□□□□ -0.18
COL4A6-209ENST00000545689 PPP6R2O75170 966 aa13.93□□□□□ -0.18
COL4A6-209ENST00000545689 NR1I2O75469 434 aa13.93□□□□□ -0.18
COL4A6-209ENST00000545689 SNX16P57768 344 aa13.93□□□□□ -0.18
COL4A6-209ENST00000545689 BCRP11274 1271 aa13.92□□□□□ -0.18
COL4A6-209ENST00000545689 ZMYM1Q5SVZ6 1142 aa13.92□□□□□ -0.18
COL4A6-209ENST00000545689 FANCBQ8NB91 859 aa13.92□□□□□ -0.18
COL4A6-209ENST00000545689 PLCB1Q9NQ66 1216 aa13.92□□□□□ -0.18
COL4A6-209ENST00000545689 ZCCHC11Q5TAX3 1644 aaKnown RBP13.92□□□□□ -0.18
COL4A6-209ENST00000545689 GOLGA6CA6NDK9 693 aa13.92□□□□□ -0.18
COL4A6-209ENST00000545689 GOLGA6DP0CG33 693 aa13.92□□□□□ -0.18
COL4A6-209ENST00000545689 GTF2A1P52655 376 aaPredicted RBP13.92□□□□□ -0.18
COL4A6-209ENST00000545689 TFAP4Q01664 338 aa13.92□□□□□ -0.18
COL4A6-209ENST00000545689 ZBTB16Q05516 673 aa13.92□□□□□ -0.18
COL4A6-209ENST00000545689 NCAPH2Q6IBW4 605 aa13.92□□□□□ -0.18
COL4A6-209ENST00000545689 BLIDQ8IZY5 108 aa13.92□□□□□ -0.18
COL4A6-209ENST00000545689 GOLGA6AQ9NYA3 693 aa13.92□□□□□ -0.18
COL4A6-209ENST00000545689 ARAP3Q8WWN8 1544 aa13.92□□□□□ -0.18
COL4A6-209ENST00000545689 PSDA5PKW4 1024 aaPredicted RBP13.92□□□□□ -0.18
COL4A6-209ENST00000545689 SEMA3EO15041 775 aa13.92□□□□□ -0.18
COL4A6-209ENST00000545689 GTPBP6O43824 516 aaPredicted RBP13.92□□□□□ -0.18
COL4A6-209ENST00000545689 PPFIA1Q13136 1202 aa13.92□□□□□ -0.18
COL4A6-209ENST00000545689 TDRD7Q8NHU6 1098 aaKnown RBP13.92□□□□□ -0.18
COL4A6-209ENST00000545689 VPS54Q9P1Q0 977 aa13.92□□□□□ -0.18
COL4A6-209ENST00000545689 SSX2IPQ9Y2D8 614 aa13.92□□□□□ -0.18
COL4A6-209ENST00000545689 SLC1A4P43007 532 aa13.92□□□□□ -0.18
COL4A6-209ENST00000545689 HERC4Q5GLZ8 1057 aaPredicted RBP13.92□□□□□ -0.18
COL4A6-209ENST00000545689 MAK16Q9BXY0 300 aaKnown RBP13.92□□□□□ -0.18
COL4A6-209ENST00000545689 MAP3K4Q9Y6R4 1608 aa13.92□□□□□ -0.18
COL4A6-209ENST00000545689 YEATS2Q9ULM3 1422 aa13.92□□□□□ -0.18
COL4A6-209ENST00000545689 JAG2Q9Y219 1238 aa13.92□□□□□ -0.18
COL4A6-209ENST00000545689 LMTK3Q96Q04 1460 aa13.92□□□□□ -0.18
COL4A6-209ENST00000545689 H7C1D1 291 aa13.91□□□□□ -0.18
COL4A6-209ENST00000545689 KRT5P13647 590 aa13.91□□□□□ -0.18
COL4A6-209ENST00000545689 ERCC5P28715 1186 aaPredicted RBP13.91□□□□□ -0.18
COL4A6-209ENST00000545689 PDIA3P30101 505 aaKnown RBP13.91□□□□□ -0.18
COL4A6-209ENST00000545689 STRN3Q13033 797 aa13.91□□□□□ -0.18
COL4A6-209ENST00000545689 TRIM58Q8NG06 486 aa13.91□□□□□ -0.18
COL4A6-209ENST00000545689 TRIM7Q9C029 511 aa13.91□□□□□ -0.18
COL4A6-209ENST00000545689 NDUFB9Q9Y6M9 179 aa13.91□□□□□ -0.18
COL4A6-209ENST00000545689 MAP3K15Q6ZN16 1313 aa13.91□□□□□ -0.18
COL4A6-209ENST00000545689 KCNJ18B7U540 433 aa13.91□□□□□ -0.18
COL4A6-209ENST00000545689 HOXA7P31268 230 aaPredicted RBP13.91□□□□□ -0.18
COL4A6-209ENST00000545689 KLHL30Q0D2K2 578 aa13.91□□□□□ -0.18
COL4A6-209ENST00000545689 KCNJ12Q14500 433 aa13.91□□□□□ -0.18
COL4A6-209ENST00000545689 PLS1Q14651 629 aa13.91□□□□□ -0.18
COL4A6-209ENST00000545689 OR8K1Q8NGG5 319 aa13.91□□□□□ -0.18
COL4A6-209ENST00000545689 LONP1P36776 959 aaKnown RBP13.91□□□□□ -0.18
COL4A6-209ENST00000545689 DNM2P50570 870 aa13.91□□□□□ -0.18
COL4A6-209ENST00000545689 CDAN1Q8IWY9 1227 aa13.91□□□□□ -0.18
COL4A6-209ENST00000545689 RASSF4Q9H2L5 321 aa13.91□□□□□ -0.18
COL4A6-209ENST00000545689 GOLGA6BA6NDN3 693 aa13.91□□□□□ -0.18
COL4A6-209ENST00000545689 MORC3Q14149 939 aa13.91□□□□□ -0.18
COL4A6-209ENST00000545689 PPP2R5EQ16537 467 aa13.91□□□□□ -0.18
COL4A6-209ENST00000545689 UTP14CQ5TAP6 766 aaKnown RBP13.91□□□□□ -0.18
COL4A6-209ENST00000545689 KCNK9Q9NPC2 374 aa13.91□□□□□ -0.18
COL4A6-209ENST00000545689 PARP2Q9UGN5 583 aa13.91□□□□□ -0.18
COL4A6-209ENST00000545689 ZBTB21Q9ULJ3 1066 aa13.91□□□□□ -0.18
COL4A6-209ENST00000545689 PCDHA7Q9UN72 937 aa13.91□□□□□ -0.18
COL4A6-209ENST00000545689 METP08581 1390 aa13.91□□□□□ -0.18
COL4A6-209ENST00000545689 LAD1O00515 517 aa13.91□□□□□ -0.18
COL4A6-209ENST00000545689 KCNQ3O43525 872 aa13.91□□□□□ -0.18
COL4A6-209ENST00000545689 POLD1P28340 1107 aa13.91□□□□□ -0.18
COL4A6-209ENST00000545689 TAOK1Q7L7X3 1001 aa13.91□□□□□ -0.18
COL4A6-209ENST00000545689 IWS1Q96ST2 819 aa13.91□□□□□ -0.18
COL4A6-209ENST00000545689 CUEDC2Q9H467 287 aa13.91□□□□□ -0.18
COL4A6-209ENST00000545689 TLDC2A0PJX2 215 aa13.9□□□□□ -0.18
COL4A6-209ENST00000545689 TRAPPC10P48553 1259 aa13.9□□□□□ -0.18
COL4A6-209ENST00000545689 BIRC3Q13489 604 aa13.9□□□□□ -0.18
COL4A6-209ENST00000545689 CCDC25Q86WR0 208 aa13.9□□□□□ -0.18
COL4A6-209ENST00000545689 TXNDC16Q9P2K2 825 aa13.9□□□□□ -0.18
COL4A6-209ENST00000545689 MKRN1Q9UHC7 482 aaKnown RBP13.9□□□□□ -0.18
COL4A6-209ENST00000545689 UNC13BO14795 1591 aa13.9□□□□□ -0.18
COL4A6-209ENST00000545689 LRRC8AQ8IWT6 810 aa13.9□□□□□ -0.18
COL4A6-209ENST00000545689 MAPK8IP1Q9UQF2 711 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms