RNA–Protein interactions for RNA: ENST00000544990.5

CPSF7-224, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-224ENST00000544990 TEX11Q8IYF3 940 aa8.95□□□□□ -0.98
CPSF7-224ENST00000544990 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.95□□□□□ -0.98
CPSF7-224ENST00000544990 ZNF384Q8TF68 577 aa8.95□□□□□ -0.98
CPSF7-224ENST00000544990 TSC1Q92574 1164 aa8.95□□□□□ -0.98
CPSF7-224ENST00000544990 WNK4Q96J92 1243 aa8.95□□□□□ -0.98
CPSF7-224ENST00000544990 CLMNQ96JQ2 1002 aa8.95□□□□□ -0.98
CPSF7-224ENST00000544990 WRNIP1Q96S55 665 aa8.95□□□□□ -0.98
CPSF7-224ENST00000544990 CRBNQ96SW2 442 aa8.95□□□□□ -0.98
CPSF7-224ENST00000544990 ELP3Q9H9T3 547 aa8.95□□□□□ -0.98
CPSF7-224ENST00000544990 PIH1D3Q9NQM4 214 aaKnown RBP8.95□□□□□ -0.98
CPSF7-224ENST00000544990 DOCK2Q92608 1830 aa8.94□□□□□ -0.98
CPSF7-224ENST00000544990 OTOFQ9HC10 1997 aa8.94□□□□□ -0.98
CPSF7-224ENST00000544990 HRO43593 1189 aa8.94□□□□□ -0.98
CPSF7-224ENST00000544990 ACTN4O43707 911 aaKnown RBP8.94□□□□□ -0.98
CPSF7-224ENST00000544990 TRAK2O60296 914 aa8.94□□□□□ -0.98
CPSF7-224ENST00000544990 WDHD1O75717 1129 aaPredicted RBP8.94□□□□□ -0.98
CPSF7-224ENST00000544990 ALDH1A1P00352 501 aa8.94□□□□□ -0.98
CPSF7-224ENST00000544990 ATP5JP18859 108 aa8.94□□□□□ -0.98
CPSF7-224ENST00000544990 CYP7A1P22680 504 aa8.94□□□□□ -0.98
CPSF7-224ENST00000544990 GUCA2AQ02747 115 aa8.94□□□□□ -0.98
CPSF7-224ENST00000544990 OTUD7BQ6GQQ9 843 aa8.94□□□□□ -0.98
CPSF7-224ENST00000544990 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.94□□□□□ -0.98
CPSF7-224ENST00000544990 OPTNQ96CV9 577 aa8.94□□□□□ -0.98
CPSF7-224ENST00000544990 GPATCH3Q96I76 525 aa8.94□□□□□ -0.98
CPSF7-224ENST00000544990 DNAJC2Q99543 621 aaKnown RBP8.94□□□□□ -0.98
CPSF7-224ENST00000544990 RNF186Q9NXI6 227 aa8.94□□□□□ -0.98
CPSF7-224ENST00000544990 AATFQ9NY61 560 aaKnown RBP eCLIP8.94□□□□□ -0.98
CPSF7-224ENST00000544990 GOLIM4O00461 696 aa8.93□□□□□ -0.98
CPSF7-224ENST00000544990 SMARCA5O60264 1052 aaPredicted RBP8.93□□□□□ -0.98
CPSF7-224ENST00000544990 VGLL4Q14135 290 aa8.93□□□□□ -0.98
CPSF7-224ENST00000544990 ERO1BQ86YB8 467 aa8.93□□□□□ -0.98
CPSF7-224ENST00000544990 ZFPM1Q8IX07 1006 aa8.93□□□□□ -0.98
CPSF7-224ENST00000544990 TNS4Q8IZW8 715 aa8.93□□□□□ -0.98
CPSF7-224ENST00000544990 MAGEB6Q8N7X4 407 aa8.93□□□□□ -0.98
CPSF7-224ENST00000544990 WNT2BQ93097 391 aa8.93□□□□□ -0.98
CPSF7-224ENST00000544990 ZKSCAN4Q969J2 545 aaPredicted RBP8.93□□□□□ -0.98
CPSF7-224ENST00000544990 BOLA2Q9H3K6 86 aa8.93□□□□□ -0.98
CPSF7-224ENST00000544990 ANTXR1Q9H6X2 564 aa8.93□□□□□ -0.98
CPSF7-224ENST00000544990 DDX4Q9NQI0 724 aaKnown RBP8.93□□□□□ -0.98
CPSF7-224ENST00000544990 TSR3Q9UJK0 312 aaKnown RBP8.93□□□□□ -0.98
CPSF7-224ENST00000544990 ZNF112Q9UJU3 913 aa8.93□□□□□ -0.98
CPSF7-224ENST00000544990 PCDHGC3Q9UN70 934 aa8.93□□□□□ -0.98
CPSF7-224ENST00000544990 NDUFB9Q9Y6M9 179 aa8.93□□□□□ -0.98
CPSF7-224ENST00000544990 CASP8AP2Q9UKL3 1982 aa8.92□□□□□ -0.98
CPSF7-224ENST00000544990 LAMB1P07942 1786 aa8.92□□□□□ -0.98
CPSF7-224ENST00000544990 RFX7Q2KHR2 1363 aa8.92□□□□□ -0.98
CPSF7-224ENST00000544990 ATRNL1Q5VV63 1379 aa8.92□□□□□ -0.98
CPSF7-224ENST00000544990 SOWAHBA6NEL2 793 aa8.92□□□□□ -0.98
CPSF7-224ENST00000544990 DDTLA6NHG4 134 aaPredicted RBP8.92□□□□□ -0.98
CPSF7-224ENST00000544990 GTF2A2P52657 109 aa8.92□□□□□ -0.98
CPSF7-224ENST00000544990 SLC9C2Q5TAH2 1124 aa8.92□□□□□ -0.98
CPSF7-224ENST00000544990 SH3RF3Q8TEJ3 882 aaPredicted RBP8.92□□□□□ -0.98
CPSF7-224ENST00000544990 TGFBRAP1Q8WUH2 860 aa8.92□□□□□ -0.98
CPSF7-224ENST00000544990 HLA-CQ95604 372 aa8.92□□□□□ -0.98
CPSF7-224ENST00000544990 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.92□□□□□ -0.984e-7■■■□□ 16.7
CPSF7-224ENST00000544990 OSBPL5Q9H0X9 879 aaPredicted RBP8.92□□□□□ -0.98
CPSF7-224ENST00000544990 DHX36Q9H2U1 1008 aaKnown RBP8.92□□□□□ -0.98
CPSF7-224ENST00000544990 ECHDC1Q9NTX5 307 aa8.92□□□□□ -0.98
CPSF7-224ENST00000544990 PAG1Q9NWQ8 432 aa8.92□□□□□ -0.98
CPSF7-224ENST00000544990 HPS5Q9UPZ3 1129 aa8.92□□□□□ -0.98
CPSF7-224ENST00000544990 SUPT16HQ9Y5B9 1047 aaKnown RBP8.92□□□□□ -0.98
CPSF7-224ENST00000544990 SNCAIPQ9Y6H5 919 aa8.92□□□□□ -0.98
CPSF7-224ENST00000544990 CDK5RAP2Q96SN8 1893 aa8.91□□□□□ -0.98
CPSF7-224ENST00000544990 FOCADQ5VW36 1801 aa8.91□□□□□ -0.98
CPSF7-224ENST00000544990 COL2A1P02458 1487 aaPredicted RBP8.91□□□□□ -0.98
CPSF7-224ENST00000544990 INPP5BP32019 993 aa8.91□□□□□ -0.98
CPSF7-224ENST00000544990 USP5P45974 858 aa8.91□□□□□ -0.98
CPSF7-224ENST00000544990 DYNLL1P63167 89 aaKnown RBP8.91□□□□□ -0.98
CPSF7-224ENST00000544990 MAP3K10Q02779 954 aa8.91□□□□□ -0.98
CPSF7-224ENST00000544990 PPATQ06203 517 aa8.91□□□□□ -0.98
CPSF7-224ENST00000544990 PPIL2Q13356 520 aa8.91□□□□□ -0.98
CPSF7-224ENST00000544990 HDAC1Q13547 482 aaPredicted RBP8.91□□□□□ -0.98
CPSF7-224ENST00000544990 NOL9Q5SY16 702 aaKnown RBP8.91□□□□□ -0.98
CPSF7-224ENST00000544990 ZSCAN25Q6NSZ9 544 aa8.91□□□□□ -0.98
CPSF7-224ENST00000544990 SH3BP5LQ7L8J4 393 aa8.91□□□□□ -0.98
CPSF7-224ENST00000544990 ADGRA1Q86SQ6 560 aa8.91□□□□□ -0.98
CPSF7-224ENST00000544990 HOMEZQ8IX15 550 aa8.91□□□□□ -0.98
CPSF7-224ENST00000544990 MIGA1Q8NAN2 632 aa8.91□□□□□ -0.98
CPSF7-224ENST00000544990 GCC1Q96CN9 775 aa8.91□□□□□ -0.98
CPSF7-224ENST00000544990 HAUS7Q99871 368 aa8.91□□□□□ -0.98
CPSF7-224ENST00000544990 TRIM34Q9BYJ4 488 aa8.91□□□□□ -0.98
CPSF7-224ENST00000544990 RWDD1Q9H446 243 aaPredicted RBP8.91□□□□□ -0.98
CPSF7-224ENST00000544990 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.91□□□□□ -0.988e-6■■□□□ 11.4
CPSF7-224ENST00000544990 PICK1Q9NRD5 415 aa8.91□□□□□ -0.98
CPSF7-224ENST00000544990 PI4KBQ9UBF8 816 aa8.91□□□□□ -0.98
CPSF7-224ENST00000544990 HERC5Q9UII4 1024 aaKnown RBP8.91□□□□□ -0.98
CPSF7-224ENST00000544990 MYH1P12882 1939 aa8.9□□□□□ -0.98
CPSF7-224ENST00000544990 MYH7P12883 1935 aa8.9□□□□□ -0.98
CPSF7-224ENST00000544990 FLT1P17948 1338 aa8.9□□□□□ -0.98
CPSF7-224ENST00000544990 TTC41PQ6P2S7 1318 aa8.9□□□□□ -0.98
CPSF7-224ENST00000544990 CCL15-CCL14A0A0B4J2E2 113 aa8.9□□□□□ -0.98
CPSF7-224ENST00000544990 MAGEB6P1A0A0J9YX57 407 aa8.9□□□□□ -0.98
CPSF7-224ENST00000544990 ERC2O15083 957 aa8.9□□□□□ -0.98
CPSF7-224ENST00000544990 CTNND1O60716 968 aaKnown RBP8.9□□□□□ -0.98
CPSF7-224ENST00000544990 TBC1D8O95759 1140 aa8.9□□□□□ -0.98
CPSF7-224ENST00000544990 HLA-DOAP06340 250 aa8.9□□□□□ -0.98
CPSF7-224ENST00000544990 CETPP11597 493 aa8.9□□□□□ -0.98
CPSF7-224ENST00000544990 PDE6AP16499 860 aa8.9□□□□□ -0.98
CPSF7-224ENST00000544990 SNAPC2Q13487 334 aa8.9□□□□□ -0.98
CPSF7-224ENST00000544990 CCL15Q16663 113 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms