RNA–Protein interactions for RNA: ENST00000544972.1

TNC-213, Transcript of tenascin C, humanhuman

TSL 5

Gene TNC, Length 1,844 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-213ENST00000544972 METTL16Q86W50 562 aaKnown RBP13.23□□□□□ -0.29
TNC-213ENST00000544972 FBXO18Q8NFZ0 1043 aa13.23□□□□□ -0.29
TNC-213ENST00000544972 CEP95Q96GE4 821 aa13.23□□□□□ -0.29
TNC-213ENST00000544972 TMEM47Q9BQJ4 181 aa13.23□□□□□ -0.29
TNC-213ENST00000544972 GJB4Q9NTQ9 266 aa13.23□□□□□ -0.29
TNC-213ENST00000544972 SBF1O95248 1867 aa13.23□□□□□ -0.29
TNC-213ENST00000544972 IGKV6D-41A0A0C4DH26 115 aa13.23□□□□□ -0.29
TNC-213ENST00000544972 TRAK2O60296 914 aa13.23□□□□□ -0.29
TNC-213ENST00000544972 RPS12P25398 132 aaKnown RBP13.23□□□□□ -0.29
TNC-213ENST00000544972 GUCY1B3Q02153 619 aa13.23□□□□□ -0.29
TNC-213ENST00000544972 DNM1Q05193 864 aaKnown RBP13.23□□□□□ -0.29
TNC-213ENST00000544972 SSRP1Q08945 709 aaKnown RBP13.23□□□□□ -0.29
TNC-213ENST00000544972 OTUD7BQ6GQQ9 843 aa13.23□□□□□ -0.29
TNC-213ENST00000544972 CCDC82Q8N4S0 544 aa13.23□□□□□ -0.29
TNC-213ENST00000544972 PNMA1Q8ND90 353 aa13.23□□□□□ -0.29
TNC-213ENST00000544972 RGS22Q8NE09 1264 aa13.23□□□□□ -0.29
TNC-213ENST00000544972 C8orf76Q96K31 380 aa13.23□□□□□ -0.29
TNC-213ENST00000544972 SLC26A6Q9BXS9 759 aa13.23□□□□□ -0.29
TNC-213ENST00000544972 KAT14Q9H8E8 782 aa13.23□□□□□ -0.29
TNC-213ENST00000544972 RBM28Q9NW13 759 aaKnown RBP13.23□□□□□ -0.29
TNC-213ENST00000544972 CNPY2Q9Y2B0 182 aa13.23□□□□□ -0.29
TNC-213ENST00000544972 DICER1Q9UPY3 1922 aaKnown RBP13.22□□□□□ -0.29
TNC-213ENST00000544972 CNTNAP1P78357 1384 aa13.22□□□□□ -0.29
TNC-213ENST00000544972 TCP10L2B9ZVM9 353 aa13.22□□□□□ -0.29
TNC-213ENST00000544972 WNT10BO00744 389 aa13.22□□□□□ -0.29
TNC-213ENST00000544972 PRPF40AO75400 957 aaKnown RBP13.22□□□□□ -0.29
TNC-213ENST00000544972 PLEKHA8P1O95397 391 aa13.22□□□□□ -0.29
TNC-213ENST00000544972 GUCY1A2P33402 732 aa13.22□□□□□ -0.29
TNC-213ENST00000544972 TMTC3Q6ZXV5 915 aa13.22□□□□□ -0.29
TNC-213ENST00000544972 FOXP4Q8IVH2 680 aaPredicted RBP13.22□□□□□ -0.29
TNC-213ENST00000544972 ALG1Q9BT22 464 aa13.22□□□□□ -0.29
TNC-213ENST00000544972 GDPD2Q9HCC8 539 aa13.22□□□□□ -0.29
TNC-213ENST00000544972 MYOZ2Q9NPC6 264 aa13.22□□□□□ -0.29
TNC-213ENST00000544972 TMOD2Q9NZR1 351 aa13.22□□□□□ -0.29
TNC-213ENST00000544972 STX8Q9UNK0 236 aa13.22□□□□□ -0.29
TNC-213ENST00000544972 FAM196BA6NMK8 535 aa13.21□□□□□ -0.29
TNC-213ENST00000544972 EGFRP00533 1210 aa13.21□□□□□ -0.29
TNC-213ENST00000544972 PTMSP20962 102 aa13.21□□□□□ -0.29
TNC-213ENST00000544972 GMPSP49915 693 aaPredicted RBP13.21□□□□□ -0.29
TNC-213ENST00000544972 MMP14P50281 582 aa13.21□□□□□ -0.29
TNC-213ENST00000544972 EIF6P56537 245 aaKnown RBP13.21□□□□□ -0.29
TNC-213ENST00000544972 NBPF9Q3BBW0 867 aa13.21□□□□□ -0.29
TNC-213ENST00000544972 TATDN1Q6P1N9 297 aa13.21□□□□□ -0.29
TNC-213ENST00000544972 ARHGAP27Q6ZUM4 889 aa13.21□□□□□ -0.29
TNC-213ENST00000544972 ZSCAN29Q8IWY8 852 aaPredicted RBP13.21□□□□□ -0.29
TNC-213ENST00000544972 DPF2Q92785 391 aa13.21□□□□□ -0.29
TNC-213ENST00000544972 MAP3K14Q99558 947 aa13.21□□□□□ -0.29
TNC-213ENST00000544972 ZSCAN16Q9H4T2 348 aaPredicted RBP13.21□□□□□ -0.29
TNC-213ENST00000544972 MTMR4Q9NYA4 1195 aa13.21□□□□□ -0.29
TNC-213ENST00000544972 TAOK2Q9UL54 1235 aa13.21□□□□□ -0.29
TNC-213ENST00000544972 MYH6P13533 1939 aa13.21□□□□□ -0.29
TNC-213ENST00000544972 MYH15Q9Y2K3 1946 aa13.21□□□□□ -0.29
TNC-213ENST00000544972 ZNF541Q9H0D2 1346 aa13.21□□□□□ -0.29
TNC-213ENST00000544972 FKBP1CQ5VVH2 108 aa13.2□□□□□ -0.3
TNC-213ENST00000544972 SRBD1Q8N5C6 995 aaKnown RBP13.2□□□□□ -0.3
TNC-213ENST00000544972 TMEM87AQ8NBN3 555 aa13.2□□□□□ -0.3
TNC-213ENST00000544972 CTCFLQ8NI51 663 aaPredicted RBP13.2□□□□□ -0.3
TNC-213ENST00000544972 FAM151AQ8WW52 585 aa13.2□□□□□ -0.3
TNC-213ENST00000544972 RNF26Q9BY78 433 aaPredicted RBP13.2□□□□□ -0.3
TNC-213ENST00000544972 SRCAPQ6ZRS2 3230 aa13.2□□□□□ -0.3
TNC-213ENST00000544972 TOP1P11387 765 aaKnown RBP13.2□□□□□ -0.3
TNC-213ENST00000544972 LMNB1P20700 586 aa13.2□□□□□ -0.3
TNC-213ENST00000544972 GRM4Q14833 912 aa13.2□□□□□ -0.3
TNC-213ENST00000544972 PKN1Q16512 942 aa13.2□□□□□ -0.3
TNC-213ENST00000544972 KRT40Q6A162 431 aa13.2□□□□□ -0.3
TNC-213ENST00000544972 USP48Q86UV5 1035 aa13.2□□□□□ -0.3
TNC-213ENST00000544972 CLEC10AQ8IUN9 316 aa13.2□□□□□ -0.3
TNC-213ENST00000544972 TRIM22Q8IYM9 498 aa13.2□□□□□ -0.3
TNC-213ENST00000544972 STAG2Q8N3U4 1231 aa13.2□□□□□ -0.3
TNC-213ENST00000544972 CCDC17Q96LX7 622 aa13.2□□□□□ -0.3
TNC-213ENST00000544972 MAD2L2Q9UI95 211 aa13.2□□□□□ -0.3
TNC-213ENST00000544972 GJA3Q9Y6H8 435 aa13.2□□□□□ -0.3
TNC-213ENST00000544972 CNTNAP5Q8WYK1 1306 aa13.2□□□□□ -0.3
TNC-213ENST00000544972 PRPF3O43395 683 aaKnown RBP13.19□□□□□ -0.3
TNC-213ENST00000544972 DEXIO95424 95 aa13.19□□□□□ -0.3
TNC-213ENST00000544972 SHROOM1Q2M3G4 852 aaPredicted RBP13.19□□□□□ -0.3
TNC-213ENST00000544972 RASGRP2Q7LDG7 609 aa13.19□□□□□ -0.3
TNC-213ENST00000544972 MICALL2Q8IY33 904 aa13.19□□□□□ -0.3
TNC-213ENST00000544972 CSRNP1Q96S65 589 aa13.19□□□□□ -0.3
TNC-213ENST00000544972 VEZTQ9HBM0 779 aa13.19□□□□□ -0.3
TNC-213ENST00000544972 PGAP2Q9UHJ9 254 aa13.19□□□□□ -0.3
TNC-213ENST00000544972 CNOT7Q9UIV1 285 aaKnown RBP13.19□□□□□ -0.3
TNC-213ENST00000544972 BAZ2BQ9UIF8 2168 aaKnown RBP13.19□□□□□ -0.3
TNC-213ENST00000544972 PALM3A6NDB9 673 aaPredicted RBP13.18□□□□□ -0.3
TNC-213ENST00000544972 KIF28PB7ZC32 967 aa13.18□□□□□ -0.3
TNC-213ENST00000544972 MYO1BO43795 1136 aa13.18□□□□□ -0.3
TNC-213ENST00000544972 YBX3P16989 372 aaKnown RBP eCLIP13.18□□□□□ -0.3
TNC-213ENST00000544972 KIF5BP33176 963 aa13.18□□□□□ -0.3
TNC-213ENST00000544972 SLC35G1Q2M3R5 365 aa13.18□□□□□ -0.3
TNC-213ENST00000544972 SKOR2Q2VWA4 1001 aaPredicted RBP13.18□□□□□ -0.3
TNC-213ENST00000544972 CERKLQ49MI3 558 aaPredicted RBP13.18□□□□□ -0.3
TNC-213ENST00000544972 SAMD7Q7Z3H4 446 aa13.18□□□□□ -0.3
TNC-213ENST00000544972 FAM83AQ86UY5 434 aa13.18□□□□□ -0.3
TNC-213ENST00000544972 CDAN1Q8IWY9 1227 aa13.18□□□□□ -0.3
TNC-213ENST00000544972 WASF1Q92558 559 aa13.18□□□□□ -0.3
TNC-213ENST00000544972 SHISA4Q96DD7 197 aa13.18□□□□□ -0.3
TNC-213ENST00000544972 V9GY48 417 aaPredicted RBP13.18□□□□□ -0.3
TNC-213ENST00000544972 FIBPO43427 364 aa13.18□□□□□ -0.3
TNC-213ENST00000544972 NCLP19338 710 aaKnown RBP13.18□□□□□ -0.3
TNC-213ENST00000544972 KRT85P78386 507 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms