RNA–Protein interactions for RNA: ENST00000544750.1

USP28-212, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 542 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-212ENST00000544750 CATSPERGQ6ZRH7 1159 aa15.75■□□□□ 0.11
USP28-212ENST00000544750 TRPV1Q8NER1 839 aa15.75■□□□□ 0.11
USP28-212ENST00000544750 LPAR1Q92633 364 aa15.75■□□□□ 0.11
USP28-212ENST00000544750 GPR108Q9NPR9 543 aa15.75■□□□□ 0.11
USP28-212ENST00000544750 DDX20Q9UHI6 824 aaKnown RBP15.75■□□□□ 0.11
USP28-212ENST00000544750 USP17L15C9J2P7 530 aa15.74■□□□□ 0.11
USP28-212ENST00000544750 USP17L13C9JLJ4 530 aa15.74■□□□□ 0.11
USP28-212ENST00000544750 USP17L11C9JVI0 530 aa15.74■□□□□ 0.11
USP28-212ENST00000544750 USP17L18D6R9N7 530 aa15.74■□□□□ 0.11
USP28-212ENST00000544750 USP17L22D6RA61 530 aa15.74■□□□□ 0.11
USP28-212ENST00000544750 USP17L17D6RBQ6 530 aa15.74■□□□□ 0.11
USP28-212ENST00000544750 USP17L19D6RCP7 530 aa15.74■□□□□ 0.11
USP28-212ENST00000544750 USP17L20D6RJB6 530 aa15.74■□□□□ 0.11
USP28-212ENST00000544750 MSCO60682 206 aa15.74■□□□□ 0.11
USP28-212ENST00000544750 GH2P01242 217 aa15.74■□□□□ 0.11
USP28-212ENST00000544750 USP17L24Q0WX57 530 aa15.74■□□□□ 0.11
USP28-212ENST00000544750 G3BP1Q13283 466 aaKnown RBP eCLIP15.74■□□□□ 0.11
USP28-212ENST00000544750 GRB14Q14449 540 aa15.74■□□□□ 0.11
USP28-212ENST00000544750 MFSD14CQ5VZR4 134 aa15.74■□□□□ 0.11
USP28-212ENST00000544750 CCAR1Q8IX12 1150 aaKnown RBP15.74■□□□□ 0.11
USP28-212ENST00000544750 NPLOC4Q8TAT6 608 aa15.74■□□□□ 0.11
USP28-212ENST00000544750 BTBD7Q9P203 1132 aa15.74■□□□□ 0.11
USP28-212ENST00000544750 DNM1LO00429 736 aa15.73■□□□□ 0.11
USP28-212ENST00000544750 CYBAP13498 195 aa15.73■□□□□ 0.11
USP28-212ENST00000544750 DYNLL1P63167 89 aaKnown RBP15.73■□□□□ 0.11
USP28-212ENST00000544750 CCNA1P78396 465 aa15.73■□□□□ 0.11
USP28-212ENST00000544750 ZNF512BQ96KM6 892 aaPredicted RBP15.73■□□□□ 0.11
USP28-212ENST00000544750 FAM161BQ96MY7 647 aa15.73■□□□□ 0.11
USP28-212ENST00000544750 LBHD1Q9BQE6 289 aaPredicted RBP15.73■□□□□ 0.11
USP28-212ENST00000544750 DBNDD2Q9BQY9 259 aa15.73■□□□□ 0.11
USP28-212ENST00000544750 TRIM34Q9BYJ4 488 aa15.73■□□□□ 0.11
USP28-212ENST00000544750 SAP30BPQ9UHR5 308 aaKnown RBP15.73■□□□□ 0.11
USP28-212ENST00000544750 NDUFB9Q9Y6M9 179 aa15.73■□□□□ 0.11
USP28-212ENST00000544750 GLRX3O76003 335 aaKnown RBP15.72■□□□□ 0.11
USP28-212ENST00000544750 GNAI2P04899 355 aa15.72■□□□□ 0.11
USP28-212ENST00000544750 HLA-DOAP06340 250 aa15.72■□□□□ 0.11
USP28-212ENST00000544750 VCAM1P19320 739 aa15.72■□□□□ 0.11
USP28-212ENST00000544750 ATN1P54259 1190 aaPredicted RBP15.72■□□□□ 0.11
USP28-212ENST00000544750 RTP1P59025 263 aa15.72■□□□□ 0.11
USP28-212ENST00000544750 TNNI3KQ59H18 835 aa15.72■□□□□ 0.11
USP28-212ENST00000544750 ZNF697Q5TEC3 545 aa15.72■□□□□ 0.11
USP28-212ENST00000544750 KIAA1683Q9H0B3 1180 aa15.72■□□□□ 0.11
USP28-212ENST00000544750 EHD4Q9H223 541 aa15.72■□□□□ 0.11
USP28-212ENST00000544750 PIH1D3Q9NQM4 214 aaKnown RBP15.72■□□□□ 0.11
USP28-212ENST00000544750 FPGT-TNNI3KV9GXZ4 949 aa15.72■□□□□ 0.11
USP28-212ENST00000544750 MYH8P13535 1937 aa15.72■□□□□ 0.11
USP28-212ENST00000544750 NAV1Q8NEY1 1877 aa15.71■□□□□ 0.11
USP28-212ENST00000544750 SPDYE16A6NNV3 312 aaPredicted RBP15.71■□□□□ 0.11
USP28-212ENST00000544750 CYP2C19P33261 490 aa15.71■□□□□ 0.11
USP28-212ENST00000544750 ZAP70P43403 619 aa15.71■□□□□ 0.11
USP28-212ENST00000544750 USP14P54578 494 aa15.71■□□□□ 0.11
USP28-212ENST00000544750 POLA2Q14181 598 aa15.71■□□□□ 0.11
USP28-212ENST00000544750 SNX17Q15036 470 aa15.71■□□□□ 0.11
USP28-212ENST00000544750 ZYXQ15942 572 aaKnown RBP15.71■□□□□ 0.11
USP28-212ENST00000544750 TTC39AQ5SRH9 613 aa15.71■□□□□ 0.11
USP28-212ENST00000544750 ATF7IPQ6VMQ6 1270 aa15.71■□□□□ 0.11
USP28-212ENST00000544750 ACER1Q8TDN7 264 aa15.71■□□□□ 0.11
USP28-212ENST00000544750 CDX2Q99626 313 aaPredicted RBP15.71■□□□□ 0.11
USP28-212ENST00000544750 TNNQ9UQP3 1299 aa15.71■□□□□ 0.11
USP28-212ENST00000544750 PLXNA1Q9UIW2 1896 aa15.71■□□□□ 0.11
USP28-212ENST00000544750 COL11A1P12107 1806 aaPredicted RBP15.71■□□□□ 0.1
USP28-212ENST00000544750 TRIM27P14373 513 aa15.7■□□□□ 0.1
USP28-212ENST00000544750 ATP2B2Q01814 1243 aa15.7■□□□□ 0.1
USP28-212ENST00000544750 SHHQ15465 462 aa15.7■□□□□ 0.1
USP28-212ENST00000544750 CCDC158Q5M9N0 1113 aa15.7■□□□□ 0.1
USP28-212ENST00000544750 C9orf50Q5SZB4 431 aa15.7■□□□□ 0.1
USP28-212ENST00000544750 SLC39A5Q6ZMH5 540 aa15.7■□□□□ 0.1
USP28-212ENST00000544750 SEMA6BQ9H3T3 888 aa15.7■□□□□ 0.1
USP28-212ENST00000544750 CWC22Q9HCG8 908 aaKnown RBP15.7■□□□□ 0.1
USP28-212ENST00000544750 TTC28Q96AY4 2481 aa15.7■□□□□ 0.1
USP28-212ENST00000544750 CNGA1P29973 690 aa15.69■□□□□ 0.1
USP28-212ENST00000544750 GUCY1A2P33402 732 aa15.69■□□□□ 0.1
USP28-212ENST00000544750 GJC2Q5T442 439 aaPredicted RBP15.69■□□□□ 0.1
USP28-212ENST00000544750 WDR78Q5VTH9 848 aa15.69■□□□□ 0.1
USP28-212ENST00000544750 OLFML2BQ68BL8 750 aa15.69■□□□□ 0.1
USP28-212ENST00000544750 FEZ1Q99689 392 aa15.69■□□□□ 0.1
USP28-212ENST00000544750 SERPINB13Q9UIV8 391 aa15.69■□□□□ 0.1
USP28-212ENST00000544750 IVNS1ABPQ9Y6Y0 642 aa15.69■□□□□ 0.1
USP28-212ENST00000544750 CYP7A1P22680 504 aa15.68■□□□□ 0.1
USP28-212ENST00000544750 SHMT1P34896 483 aa15.68■□□□□ 0.1
USP28-212ENST00000544750 RAB3GAP1Q15042 981 aa15.68■□□□□ 0.1
USP28-212ENST00000544750 CERKLQ49MI3 558 aaPredicted RBP15.68■□□□□ 0.1
USP28-212ENST00000544750 SSH3Q8TE77 659 aa15.68■□□□□ 0.1
USP28-212ENST00000544750 TTYH1Q9H313 450 aaPredicted RBP15.68■□□□□ 0.1
USP28-212ENST00000544750 RPAP3Q9H6T3 665 aaPredicted RBP15.68■□□□□ 0.1
USP28-212ENST00000544750 PRKAG2Q9UGJ0 569 aa15.68■□□□□ 0.1
USP28-212ENST00000544750 DBNLQ9UJU6 430 aaKnown RBP15.68■□□□□ 0.1
USP28-212ENST00000544750 ATP11BQ9Y2G3 1177 aa15.68■□□□□ 0.1
USP28-212ENST00000544750 SMAD3P84022 425 aaKnown RBP15.67■□□□□ 0.1
USP28-212ENST00000544750 ABCB5Q2M3G0 1257 aa15.67■□□□□ 0.1
USP28-212ENST00000544750 C1orf53Q5VUE5 145 aa15.67■□□□□ 0.1
USP28-212ENST00000544750 CERS3Q8IU89 383 aa15.67■□□□□ 0.1
USP28-212ENST00000544750 MIGA1Q8NAN2 632 aa15.67■□□□□ 0.1
USP28-212ENST00000544750 ARRDC4Q8NCT1 418 aa15.67■□□□□ 0.1
USP28-212ENST00000544750 MAFAQ8NHW3 353 aaPredicted RBP15.67■□□□□ 0.1
USP28-212ENST00000544750 MOV10L1Q9BXT6 1211 aaKnown RBP15.67■□□□□ 0.1
USP28-212ENST00000544750 PDLIM7Q9NR12 457 aa15.67■□□□□ 0.1
USP28-212ENST00000544750 MUC3AQ02505 3323 aa15.66■□□□□ 0.1
USP28-212ENST00000544750 TRIM43BA6NCK2 446 aa15.66■□□□□ 0.1
USP28-212ENST00000544750 SEPT4O43236 478 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms