RNA–Protein interactions for RNA: ENST00000543469.1

TRIM59-208, Transcript of tripartite motif containing 59, humanhuman

TSL 5 BASIC

Gene TRIM59, Length 4,615 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-208ENST00000543469 F13A1P00488 732 aa9.16□□□□□ -0.94
TRIM59-208ENST00000543469 IFNAR1P17181 557 aa9.16□□□□□ -0.94
TRIM59-208ENST00000543469 GMPSP49915 693 aaPredicted RBP9.16□□□□□ -0.94
TRIM59-208ENST00000543469 SLFN13Q68D06 897 aa9.16□□□□□ -0.94
TRIM59-208ENST00000543469 USP17L2Q6R6M4 530 aa9.16□□□□□ -0.94
TRIM59-208ENST00000543469 ZC3H15Q8WU90 426 aaKnown RBP9.16□□□□□ -0.94
TRIM59-208ENST00000543469 GPR101Q96P66 508 aaPredicted RBP9.16□□□□□ -0.94
TRIM59-208ENST00000543469 RIOK1Q9BRS2 568 aaKnown RBP9.16□□□□□ -0.94
TRIM59-208ENST00000543469 DDX19AQ9NUU7 478 aaKnown RBP9.16□□□□□ -0.94
TRIM59-208ENST00000543469 SPDYE2BA6NHP3 402 aa9.16□□□□□ -0.94
TRIM59-208ENST00000543469 USP17L5A8MUK1 530 aa9.16□□□□□ -0.94
TRIM59-208ENST00000543469 C19orf81C9J6K1 198 aa9.16□□□□□ -0.94
TRIM59-208ENST00000543469 DKC1O60832 514 aaKnown RBP eCLIP9.16□□□□□ -0.94
TRIM59-208ENST00000543469 SMC2O95347 1197 aa9.16□□□□□ -0.94
TRIM59-208ENST00000543469 SPDYE6P0CI01 402 aa9.16□□□□□ -0.94
TRIM59-208ENST00000543469 TRAPPC10P48553 1259 aa9.16□□□□□ -0.94
TRIM59-208ENST00000543469 C2orf69Q8N8R5 385 aa9.16□□□□□ -0.94
TRIM59-208ENST00000543469 LPAR1Q92633 364 aa9.16□□□□□ -0.94
TRIM59-208ENST00000543469 CLIP2Q9UDT6 1046 aa9.16□□□□□ -0.94
TRIM59-208ENST00000543469 PRPF3O43395 683 aaKnown RBP9.15□□□□□ -0.94
TRIM59-208ENST00000543469 ME1P48163 572 aa9.15□□□□□ -0.94
TRIM59-208ENST00000543469 SLC4A3P48751 1232 aa9.15□□□□□ -0.94
TRIM59-208ENST00000543469 SPDYE2Q495Y8 402 aa9.15□□□□□ -0.94
TRIM59-208ENST00000543469 APOA5Q6Q788 366 aa9.15□□□□□ -0.94
TRIM59-208ENST00000543469 OLFM4Q6UX06 510 aa9.15□□□□□ -0.94
TRIM59-208ENST00000543469 USP25Q9UHP3 1055 aa9.15□□□□□ -0.94
TRIM59-208ENST00000543469 AK9Q5TCS8 1911 aa9.15□□□□□ -0.94
TRIM59-208ENST00000543469 FMNL1O95466 1100 aaPredicted RBP9.15□□□□□ -0.94
TRIM59-208ENST00000543469 CCNA1P78396 465 aa9.15□□□□□ -0.94
TRIM59-208ENST00000543469 AMPD3Q01432 767 aa9.15□□□□□ -0.94
TRIM59-208ENST00000543469 EAPPQ56P03 285 aaPredicted RBP9.15□□□□□ -0.94
TRIM59-208ENST00000543469 HEATR3Q7Z4Q2 680 aa9.15□□□□□ -0.94
TRIM59-208ENST00000543469 PITPNM2Q9BZ72 1349 aa9.15□□□□□ -0.94
TRIM59-208ENST00000543469 TRIM75PA6NK02 468 aa9.15□□□□□ -0.95
TRIM59-208ENST00000543469 PDIA3P30101 505 aaKnown RBP9.15□□□□□ -0.95
TRIM59-208ENST00000543469 ADCY7P51828 1080 aa9.15□□□□□ -0.95
TRIM59-208ENST00000543469 STIM1Q13586 685 aa9.15□□□□□ -0.95
TRIM59-208ENST00000543469 FEM1BQ9UK73 627 aa9.15□□□□□ -0.95
TRIM59-208ENST00000543469 UBR3Q6ZT12 1888 aa9.15□□□□□ -0.95
TRIM59-208ENST00000543469 PRKAB2O43741 272 aa9.14□□□□□ -0.95
TRIM59-208ENST00000543469 FHDC1Q9C0D6 1143 aaPredicted RBP9.14□□□□□ -0.95
TRIM59-208ENST00000543469 MAF1Q9H063 256 aa9.14□□□□□ -0.95
TRIM59-208ENST00000543469 TAF1LQ8IZX4 1826 aa9.14□□□□□ -0.95
TRIM59-208ENST00000543469 CXCL9Q07325 125 aa9.14□□□□□ -0.95
TRIM59-208ENST00000543469 GRM4Q14833 912 aa9.14□□□□□ -0.95
TRIM59-208ENST00000543469 TKFCQ3LXA3 575 aa9.14□□□□□ -0.95
TRIM59-208ENST00000543469 FOXD4L5Q5VV16 416 aaPredicted RBP9.14□□□□□ -0.95
TRIM59-208ENST00000543469 CEP57L1Q8IYX8 460 aa9.14□□□□□ -0.95
TRIM59-208ENST00000543469 FOXD4L4Q8WXT5 416 aaPredicted RBP9.14□□□□□ -0.95
TRIM59-208ENST00000543469 UNCXA6NJT0 531 aa9.14□□□□□ -0.95
TRIM59-208ENST00000543469 CTNND1O60716 968 aaKnown RBP9.14□□□□□ -0.95
TRIM59-208ENST00000543469 MCM4P33991 863 aa9.14□□□□□ -0.95
TRIM59-208ENST00000543469 IRX3P78415 501 aaPredicted RBP9.14□□□□□ -0.95
TRIM59-208ENST00000543469 C9orf131Q5VYM1 1079 aa9.14□□□□□ -0.95
TRIM59-208ENST00000543469 DDX60Q8IY21 1712 aaKnown RBP9.14□□□□□ -0.95
TRIM59-208ENST00000543469 TDRD3Q9H7E2 651 aaKnown RBP9.14□□□□□ -0.95
TRIM59-208ENST00000543469 COL1A1P02452 1464 aaPredicted RBP9.14□□□□□ -0.95
TRIM59-208ENST00000543469 CLRN2A0PK11 232 aa9.14□□□□□ -0.95
TRIM59-208ENST00000543469 TBC1D12O60347 775 aa9.14□□□□□ -0.95
TRIM59-208ENST00000543469 BMP3P12645 472 aa9.14□□□□□ -0.95
TRIM59-208ENST00000543469 CDK11BP21127 795 aaKnown RBP9.14□□□□□ -0.95
TRIM59-208ENST00000543469 EXOSC10Q01780 885 aaKnown RBP9.14□□□□□ -0.95
TRIM59-208ENST00000543469 RASEFQ8IZ41 740 aa9.14□□□□□ -0.95
TRIM59-208ENST00000543469 SDF4Q9BRK5 362 aa9.14□□□□□ -0.95
TRIM59-208ENST00000543469 GOLGA6L19H0YKK7 550 aa9.13□□□□□ -0.95
TRIM59-208ENST00000543469 LAD1O00515 517 aa9.13□□□□□ -0.95
TRIM59-208ENST00000543469 SCG2P13521 617 aa9.13□□□□□ -0.95
TRIM59-208ENST00000543469 UBE2HP62256 183 aa9.13□□□□□ -0.95
TRIM59-208ENST00000543469 SAMD1Q6SPF0 538 aaPredicted RBP9.13□□□□□ -0.95
TRIM59-208ENST00000543469 FASTKD5Q7L8L6 764 aaKnown RBP9.13□□□□□ -0.95
TRIM59-208ENST00000543469 NECAB1Q8N987 351 aa9.13□□□□□ -0.95
TRIM59-208ENST00000543469 TRIM44Q96DX7 344 aaPredicted RBP9.13□□□□□ -0.95
TRIM59-208ENST00000543469 CALML4Q96GE6 196 aa9.13□□□□□ -0.95
TRIM59-208ENST00000543469 LRRC2Q9BYS8 371 aa9.13□□□□□ -0.95
TRIM59-208ENST00000543469 PALD1Q9ULE6 856 aa9.13□□□□□ -0.95
TRIM59-208ENST00000543469 GOLGA6L3A6NEY3 463 aa9.13□□□□□ -0.95
TRIM59-208ENST00000543469 SNAP23O00161 211 aa9.13□□□□□ -0.95
TRIM59-208ENST00000543469 TNPO1Q92973 898 aaKnown RBP9.13□□□□□ -0.95
TRIM59-208ENST00000543469 ZSWIM5Q9P217 1185 aa9.13□□□□□ -0.95
TRIM59-208ENST00000543469 FBXO40Q9UH90 709 aa9.13□□□□□ -0.95
TRIM59-208ENST00000543469 PRDM1O75626 825 aa9.13□□□□□ -0.95
TRIM59-208ENST00000543469 FOSBP53539 338 aa9.13□□□□□ -0.95
TRIM59-208ENST00000543469 CDC37L1Q7L3B6 337 aa9.13□□□□□ -0.95
TRIM59-208ENST00000543469 AMNQ9BXJ7 453 aa9.13□□□□□ -0.95
TRIM59-208ENST00000543469 KLRF2D3W0D1 207 aa9.12□□□□□ -0.95
TRIM59-208ENST00000543469 FIBPO43427 364 aa9.12□□□□□ -0.95
TRIM59-208ENST00000543469 NONOQ15233 471 aaKnown RBP eCLIP9.12□□□□□ -0.95
TRIM59-208ENST00000543469 TPD52L1Q16890 204 aaPredicted RBP9.12□□□□□ -0.95
TRIM59-208ENST00000543469 FAM47AQ5JRC9 791 aa9.12□□□□□ -0.95
TRIM59-208ENST00000543469 TANGO6Q9C0B7 1094 aa9.12□□□□□ -0.95
TRIM59-208ENST00000543469 MYH14Q7Z406 1995 aaKnown RBP9.12□□□□□ -0.95
TRIM59-208ENST00000543469 GCFC2P16383 781 aaKnown RBP9.12□□□□□ -0.95
TRIM59-208ENST00000543469 PPP1R2P41236 205 aa9.12□□□□□ -0.95
TRIM59-208ENST00000543469 TBC1D10CQ8IV04 446 aa9.12□□□□□ -0.95
TRIM59-208ENST00000543469 ANKS1AQ92625 1134 aa9.12□□□□□ -0.95
TRIM59-208ENST00000543469 FOXP1Q9H334 677 aaPredicted RBP9.12□□□□□ -0.95
TRIM59-208ENST00000543469 COL2A1P02458 1487 aaPredicted RBP9.12□□□□□ -0.95
TRIM59-208ENST00000543469 YEATS4O95619 227 aa9.12□□□□□ -0.95
TRIM59-208ENST00000543469 FKBP1BP68106 108 aa9.12□□□□□ -0.95
TRIM59-208ENST00000543469 ME3Q16798 604 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms