RNA–Protein interactions for RNA: ENST00000542848.5

PTPN6-219, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 5

Gene PTPN6, Length 656 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-219ENST00000542848 RLFQ13129 1914 aa14.41□□□□□ -0.1
PTPN6-219ENST00000542848 PEX10O60683 326 aa14.41□□□□□ -0.1
PTPN6-219ENST00000542848 MS4A1P11836 297 aa14.41□□□□□ -0.1
PTPN6-219ENST00000542848 ABCB5Q2M3G0 1257 aa14.41□□□□□ -0.1
PTPN6-219ENST00000542848 PLEKHH3Q7Z736 793 aa14.41□□□□□ -0.1
PTPN6-219ENST00000542848 DIS3LQ8TF46 1054 aaKnown RBP14.41□□□□□ -0.1
PTPN6-219ENST00000542848 RIOK1Q9BRS2 568 aaKnown RBP14.41□□□□□ -0.1
PTPN6-219ENST00000542848 CABP5Q9NP86 173 aa14.41□□□□□ -0.1
PTPN6-219ENST00000542848 OGDHLQ9ULD0 1010 aa14.41□□□□□ -0.1
PTPN6-219ENST00000542848 RABGAP1Q9Y3P9 1069 aa14.41□□□□□ -0.1
PTPN6-219ENST00000542848 MAGEB6P1A0A0J9YX57 407 aa14.4□□□□□ -0.1
PTPN6-219ENST00000542848 PRKAR2AP13861 404 aaKnown RBP14.4□□□□□ -0.1
PTPN6-219ENST00000542848 RGS2P41220 211 aa14.4□□□□□ -0.1
PTPN6-219ENST00000542848 MNX1P50219 401 aaPredicted RBP14.4□□□□□ -0.1
PTPN6-219ENST00000542848 CCNA1P78396 465 aa14.4□□□□□ -0.1
PTPN6-219ENST00000542848 RAB3GAP1Q15042 981 aa14.4□□□□□ -0.1
PTPN6-219ENST00000542848 MORN1Q5T089 497 aa14.4□□□□□ -0.1
PTPN6-219ENST00000542848 POTEEQ6S8J3 1075 aa14.4□□□□□ -0.1
PTPN6-219ENST00000542848 CATSPERGQ6ZRH7 1159 aa14.4□□□□□ -0.1
PTPN6-219ENST00000542848 GPR142Q7Z601 462 aa14.4□□□□□ -0.1
PTPN6-219ENST00000542848 RPAP2Q8IXW5 612 aaPredicted RBP14.4□□□□□ -0.1
PTPN6-219ENST00000542848 RHPN1Q8TCX5 695 aa14.4□□□□□ -0.1
PTPN6-219ENST00000542848 PANK1Q8TE04 598 aa14.4□□□□□ -0.1
PTPN6-219ENST00000542848 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.4□□□□□ -0.1
PTPN6-219ENST00000542848 FEZ1Q99689 392 aa14.4□□□□□ -0.1
PTPN6-219ENST00000542848 PAGR1Q9BTK6 254 aa14.4□□□□□ -0.1
PTPN6-219ENST00000542848 KIAA1683Q9H0B3 1180 aa14.4□□□□□ -0.1
PTPN6-219ENST00000542848 PORCNQ9H237 461 aa14.4□□□□□ -0.1
PTPN6-219ENST00000542848 PARP14Q460N5 1801 aa14.4□□□□□ -0.1
PTPN6-219ENST00000542848 ZBED9Q6R2W3 1325 aa14.4□□□□□ -0.1
PTPN6-219ENST00000542848 LAMA3Q16787 3333 aa14.39□□□□□ -0.11
PTPN6-219ENST00000542848 GLRX3O76003 335 aaKnown RBP14.39□□□□□ -0.11
PTPN6-219ENST00000542848 ZKSCAN1P17029 563 aaPredicted RBP14.39□□□□□ -0.11
PTPN6-219ENST00000542848 SHMT1P34896 483 aa14.39□□□□□ -0.11
PTPN6-219ENST00000542848 PLCD1P51178 756 aa14.39□□□□□ -0.11
PTPN6-219ENST00000542848 CACNB2Q08289 660 aaPredicted RBP14.39□□□□□ -0.11
PTPN6-219ENST00000542848 SLC9C2Q5TAH2 1124 aa14.39□□□□□ -0.11
PTPN6-219ENST00000542848 LBX2Q6XYB7 198 aa14.39□□□□□ -0.11
PTPN6-219ENST00000542848 CLASRPQ8N2M8 674 aaKnown RBP14.39□□□□□ -0.11
PTPN6-219ENST00000542848 C11orf49Q9H6J7 331 aa14.39□□□□□ -0.11
PTPN6-219ENST00000542848 IL1RAPL2Q9NP60 686 aa14.39□□□□□ -0.11
PTPN6-219ENST00000542848 STAP2Q9UGK3 403 aa14.39□□□□□ -0.11
PTPN6-219ENST00000542848 CNMDO75829 334 aa14.38□□□□□ -0.11
PTPN6-219ENST00000542848 POLR3DP05423 398 aaPredicted RBP14.38□□□□□ -0.11
PTPN6-219ENST00000542848 PDE6AP16499 860 aa14.38□□□□□ -0.11
PTPN6-219ENST00000542848 BMP8BP34820 402 aa14.38□□□□□ -0.11
PTPN6-219ENST00000542848 GABPAQ06546 454 aa14.38□□□□□ -0.11
PTPN6-219ENST00000542848 ZYXQ15942 572 aaKnown RBP14.38□□□□□ -0.11
PTPN6-219ENST00000542848 KIF1BPQ96EK5 621 aa14.38□□□□□ -0.11
PTPN6-219ENST00000542848 APBA2Q99767 749 aa14.38□□□□□ -0.11
PTPN6-219ENST00000542848 CRNKL1Q9BZJ0 848 aaKnown RBP14.38□□□□□ -0.11
PTPN6-219ENST00000542848 COL11A1P12107 1806 aaPredicted RBP14.37□□□□□ -0.11
PTPN6-219ENST00000542848 HMMRO75330 724 aa14.37□□□□□ -0.11
PTPN6-219ENST00000542848 VCAM1P19320 739 aa14.37□□□□□ -0.11
PTPN6-219ENST00000542848 GUCY1A2P33402 732 aa14.37□□□□□ -0.11
PTPN6-219ENST00000542848 MAP2K5Q13163 448 aa14.37□□□□□ -0.11
PTPN6-219ENST00000542848 ACER1Q8TDN7 264 aa14.37□□□□□ -0.11
PTPN6-219ENST00000542848 EDC3Q96F86 508 aaKnown RBP14.37□□□□□ -0.11
PTPN6-219ENST00000542848 GDF15Q99988 308 aa14.37□□□□□ -0.11
PTPN6-219ENST00000542848 CWC22Q9HCG8 908 aaKnown RBP14.37□□□□□ -0.11
PTPN6-219ENST00000542848 SMCHD1A6NHR9 2005 aa14.37□□□□□ -0.11
PTPN6-219ENST00000542848 SLC15A5A6NIM6 579 aa14.36□□□□□ -0.11
PTPN6-219ENST00000542848 IFIT2P09913 472 aaKnown RBP14.36□□□□□ -0.11
PTPN6-219ENST00000542848 CCL14Q16627 93 aa14.36□□□□□ -0.11
PTPN6-219ENST00000542848 LHX8Q68G74 356 aa14.36□□□□□ -0.11
PTPN6-219ENST00000542848 C7orf61Q8IZ16 206 aa14.36□□□□□ -0.11
PTPN6-219ENST00000542848 MCM9Q9NXL9 1143 aa14.36□□□□□ -0.11
PTPN6-219ENST00000542848 DDX19BQ9UMR2 479 aa14.36□□□□□ -0.11
PTPN6-219ENST00000542848 ZNF532Q9HCE3 1301 aa14.36□□□□□ -0.11
PTPN6-219ENST00000542848 ZNF236Q9UL36 1845 aa14.36□□□□□ -0.11
PTPN6-219ENST00000542848 PLXNA1Q9UIW2 1896 aa14.35□□□□□ -0.11
PTPN6-219ENST00000542848 A0A0G2JMZ2 1700 aa14.35□□□□□ -0.11
PTPN6-219ENST00000542848 TCRBV5S4A2TA0A5A2 114 aa14.35□□□□□ -0.11
PTPN6-219ENST00000542848 GOLIM4O00461 696 aa14.35□□□□□ -0.11
PTPN6-219ENST00000542848 RAB11FIP3O75154 756 aa14.35□□□□□ -0.11
PTPN6-219ENST00000542848 COL6A1P12109 1028 aa14.35□□□□□ -0.11
PTPN6-219ENST00000542848 PTPREP23469 700 aa14.35□□□□□ -0.11
PTPN6-219ENST00000542848 CCND3P30281 292 aaPredicted RBP14.35□□□□□ -0.11
PTPN6-219ENST00000542848 SEPT2Q15019 361 aa14.35□□□□□ -0.11
PTPN6-219ENST00000542848 CHMP4BQ9H444 224 aaKnown RBP14.35□□□□□ -0.11
PTPN6-219ENST00000542848 RPAP3Q9H6T3 665 aaPredicted RBP14.35□□□□□ -0.11
PTPN6-219ENST00000542848 DCP1AQ9NPI6 582 aaPredicted RBP14.35□□□□□ -0.11
PTPN6-219ENST00000542848 ZBTB40Q9NUA8 1239 aa14.35□□□□□ -0.11
PTPN6-219ENST00000542848 HOXC10Q9NYD6 342 aa14.35□□□□□ -0.11
PTPN6-219ENST00000542848 BTBD7Q9P203 1132 aa14.35□□□□□ -0.11
PTPN6-219ENST00000542848 IVNS1ABPQ9Y6Y0 642 aa14.35□□□□□ -0.11
PTPN6-219ENST00000542848 COL6A3P12111 3177 aa14.35□□□□□ -0.11
PTPN6-219ENST00000542848 SPDYE16A6NNV3 312 aaPredicted RBP14.34□□□□□ -0.11
PTPN6-219ENST00000542848 APBB1O00213 710 aa14.34□□□□□ -0.11
PTPN6-219ENST00000542848 HOXC6P09630 235 aa14.34□□□□□ -0.11
PTPN6-219ENST00000542848 COG2Q14746 738 aa14.34□□□□□ -0.11
PTPN6-219ENST00000542848 WDR78Q5VTH9 848 aa14.34□□□□□ -0.11
PTPN6-219ENST00000542848 MFSD14CQ5VZR4 134 aa14.34□□□□□ -0.11
PTPN6-219ENST00000542848 SIRT2Q8IXJ6 389 aa14.34□□□□□ -0.11
PTPN6-219ENST00000542848 DNAJC2Q99543 621 aaKnown RBP14.34□□□□□ -0.11
PTPN6-219ENST00000542848 SWAP70Q9UH65 585 aa14.34□□□□□ -0.11
PTPN6-219ENST00000542848 ZMYND8Q9ULU4 1186 aaPredicted RBP14.34□□□□□ -0.11
PTPN6-219ENST00000542848 PFASO15067 1338 aa14.34□□□□□ -0.11
PTPN6-219ENST00000542848 A0A1W2PRG0 241 aa14.33□□□□□ -0.12
PTPN6-219ENST00000542848 MPHOSPH10O00566 681 aaKnown RBP14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms