RNA–Protein interactions for RNA: ENST00000542687.1

MRPL40P1-201, Transcript of mitochondrial ribosomal protein L40 pseudogene 1, humanhuman

BASIC

Gene MRPL40P1, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL40P1-201ENST00000542687 TOP1P11387 765 aaKnown RBP9.4□□□□□ -0.9
MRPL40P1-201ENST00000542687 CAP2P40123 477 aa9.4□□□□□ -0.9
MRPL40P1-201ENST00000542687 EVCP57679 992 aa9.4□□□□□ -0.9
MRPL40P1-201ENST00000542687 ATP2B2Q01814 1243 aa9.4□□□□□ -0.9
MRPL40P1-201ENST00000542687 PRKG1Q13976 671 aa9.4□□□□□ -0.9
MRPL40P1-201ENST00000542687 TTLL12Q14166 644 aaPredicted RBP9.4□□□□□ -0.9
MRPL40P1-201ENST00000542687 RRP1BQ14684 758 aaKnown RBP9.4□□□□□ -0.9
MRPL40P1-201ENST00000542687 SEPT2Q15019 361 aa9.4□□□□□ -0.9
MRPL40P1-201ENST00000542687 RAB3GAP1Q15042 981 aa9.4□□□□□ -0.9
MRPL40P1-201ENST00000542687 CHADLQ6NUI6 762 aa9.4□□□□□ -0.9
MRPL40P1-201ENST00000542687 DLK2Q6UY11 383 aa9.4□□□□□ -0.9
MRPL40P1-201ENST00000542687 CEP95Q96GE4 821 aa9.4□□□□□ -0.9
MRPL40P1-201ENST00000542687 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.4□□□□□ -0.9
MRPL40P1-201ENST00000542687 SLKQ9H2G2 1235 aaPredicted RBP9.4□□□□□ -0.9
MRPL40P1-201ENST00000542687 SENP2Q9HC62 589 aa9.4□□□□□ -0.9
MRPL40P1-201ENST00000542687 CLIP2Q9UDT6 1046 aa9.4□□□□□ -0.9
MRPL40P1-201ENST00000542687 ZNF112Q9UJU3 913 aa9.4□□□□□ -0.9
MRPL40P1-201ENST00000542687 BRPF3Q9ULD4 1205 aa9.4□□□□□ -0.9
MRPL40P1-201ENST00000542687 ADAMTSL1Q8N6G6 1762 aa9.4□□□□□ -0.91
MRPL40P1-201ENST00000542687 PLIN4Q96Q06 1357 aa9.39□□□□□ -0.91
MRPL40P1-201ENST00000542687 GOLGA8BA8MQT2 603 aa9.39□□□□□ -0.91
MRPL40P1-201ENST00000542687 DHX16O60231 1041 aaKnown RBP9.39□□□□□ -0.91
MRPL40P1-201ENST00000542687 PFKFB2O60825 505 aa9.39□□□□□ -0.91
MRPL40P1-201ENST00000542687 USP2O75604 605 aaPredicted RBP9.39□□□□□ -0.91
MRPL40P1-201ENST00000542687 CALM1P0DP23 149 aa9.39□□□□□ -0.91
MRPL40P1-201ENST00000542687 CALM2P0DP24 149 aa9.39□□□□□ -0.91
MRPL40P1-201ENST00000542687 CALM3P0DP25 149 aa9.39□□□□□ -0.91
MRPL40P1-201ENST00000542687 EEF2P13639 858 aaKnown RBP9.39□□□□□ -0.91
MRPL40P1-201ENST00000542687 PDIA3P30101 505 aaKnown RBP9.39□□□□□ -0.91
MRPL40P1-201ENST00000542687 IREB2P48200 963 aaKnown RBP9.39□□□□□ -0.91
MRPL40P1-201ENST00000542687 MAP3K9P80192 1104 aa9.39□□□□□ -0.91
MRPL40P1-201ENST00000542687 ICA1Q05084 483 aa9.39□□□□□ -0.91
MRPL40P1-201ENST00000542687 STK3Q13188 491 aa9.39□□□□□ -0.91
MRPL40P1-201ENST00000542687 ME3Q16798 604 aa9.39□□□□□ -0.91
MRPL40P1-201ENST00000542687 RCSD1Q6JBY9 416 aa9.39□□□□□ -0.91
MRPL40P1-201ENST00000542687 NUP133Q8WUM0 1156 aa9.39□□□□□ -0.91
MRPL40P1-201ENST00000542687 KLRG1Q96E93 195 aa9.39□□□□□ -0.91
MRPL40P1-201ENST00000542687 WRNIP1Q96S55 665 aa9.39□□□□□ -0.91
MRPL40P1-201ENST00000542687 TMEM47Q9BQJ4 181 aa9.39□□□□□ -0.91
MRPL40P1-201ENST00000542687 PICK1Q9NRD5 415 aa9.39□□□□□ -0.91
MRPL40P1-201ENST00000542687 NYAP2Q9P242 653 aa9.39□□□□□ -0.91
MRPL40P1-201ENST00000542687 ZBTB21Q9ULJ3 1066 aa9.39□□□□□ -0.91
MRPL40P1-201ENST00000542687 PCNTO95613 3336 aa9.38□□□□□ -0.91
MRPL40P1-201ENST00000542687 CCDC196A0A1B0GTZ2 297 aa9.38□□□□□ -0.91
MRPL40P1-201ENST00000542687 GOLGA8AA7E2F4 631 aa9.38□□□□□ -0.91
MRPL40P1-201ENST00000542687 TRAF5O00463 557 aa9.38□□□□□ -0.91
MRPL40P1-201ENST00000542687 DDAH1O94760 285 aa9.38□□□□□ -0.91
MRPL40P1-201ENST00000542687 INPP5BP32019 993 aa9.38□□□□□ -0.91
MRPL40P1-201ENST00000542687 GUCY1A2P33402 732 aa9.38□□□□□ -0.91
MRPL40P1-201ENST00000542687 NOVP48745 357 aa9.38□□□□□ -0.91
MRPL40P1-201ENST00000542687 SLC4A3P48751 1232 aa9.38□□□□□ -0.91
MRPL40P1-201ENST00000542687 METAP2P50579 478 aaKnown RBP eCLIP9.38□□□□□ -0.91
MRPL40P1-201ENST00000542687 RCAN1P53805 252 aa9.38□□□□□ -0.91
MRPL40P1-201ENST00000542687 CCT2P78371 535 aaKnown RBP9.38□□□□□ -0.91
MRPL40P1-201ENST00000542687 JAG1P78504 1218 aa9.38□□□□□ -0.91
MRPL40P1-201ENST00000542687 PPP2R5BQ15173 497 aa9.38□□□□□ -0.91
MRPL40P1-201ENST00000542687 SHROOM1Q2M3G4 852 aaPredicted RBP9.38□□□□□ -0.91
MRPL40P1-201ENST00000542687 APOA5Q6Q788 366 aa9.38□□□□□ -0.91
MRPL40P1-201ENST00000542687 ARMC9Q7Z3E5 817 aa9.38□□□□□ -0.91
MRPL40P1-201ENST00000542687 MICU3Q86XE3 530 aa9.38□□□□□ -0.91
MRPL40P1-201ENST00000542687 SCYL3Q8IZE3 742 aa9.38□□□□□ -0.91
MRPL40P1-201ENST00000542687 ZNF654Q8IZM8 581 aa9.38□□□□□ -0.91
MRPL40P1-201ENST00000542687 NECAB1Q8N987 351 aa9.38□□□□□ -0.91
MRPL40P1-201ENST00000542687 FANCBQ8NB91 859 aa9.38□□□□□ -0.91
MRPL40P1-201ENST00000542687 PNMA1Q8ND90 353 aa9.38□□□□□ -0.91
MRPL40P1-201ENST00000542687 RBM46Q8TBY0 533 aaKnown RBP9.38□□□□□ -0.91
MRPL40P1-201ENST00000542687 MKL1Q969V6 931 aa9.38□□□□□ -0.91
MRPL40P1-201ENST00000542687 SH2D4AQ9H788 454 aa9.38□□□□□ -0.91
MRPL40P1-201ENST00000542687 ZNF408Q9H9D4 720 aa9.38□□□□□ -0.91
MRPL40P1-201ENST00000542687 ARHGEF10LQ9HCE6 1279 aa9.38□□□□□ -0.91
MRPL40P1-201ENST00000542687 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.38□□□□□ -0.91
MRPL40P1-201ENST00000542687 WDR90Q96KV7 1748 aa9.38□□□□□ -0.91
MRPL40P1-201ENST00000542687 USP17L5A8MUK1 530 aa9.37□□□□□ -0.91
MRPL40P1-201ENST00000542687 CPLX1O14810 134 aa9.37□□□□□ -0.91
MRPL40P1-201ENST00000542687 LARGE1O95461 756 aa9.37□□□□□ -0.91
MRPL40P1-201ENST00000542687 KIF5BP33176 963 aa9.37□□□□□ -0.91
MRPL40P1-201ENST00000542687 APLP1P51693 650 aa9.37□□□□□ -0.91
MRPL40P1-201ENST00000542687 CUL4AQ13619 759 aa9.37□□□□□ -0.91
MRPL40P1-201ENST00000542687 RTN1Q16799 776 aa9.37□□□□□ -0.91
MRPL40P1-201ENST00000542687 CPLX2Q6PUV4 134 aaKnown RBP9.37□□□□□ -0.91
MRPL40P1-201ENST00000542687 RAB11FIP4Q86YS3 637 aa9.37□□□□□ -0.91
MRPL40P1-201ENST00000542687 CCDC83Q8IWF9 413 aa9.37□□□□□ -0.91
MRPL40P1-201ENST00000542687 SPRYD3Q8NCJ5 442 aa9.37□□□□□ -0.91
MRPL40P1-201ENST00000542687 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.37□□□□□ -0.91
MRPL40P1-201ENST00000542687 CTCFLQ8NI51 663 aaPredicted RBP9.37□□□□□ -0.91
MRPL40P1-201ENST00000542687 GTF3C6Q969F1 213 aa9.37□□□□□ -0.91
MRPL40P1-201ENST00000542687 ZKSCAN4Q969J2 545 aaPredicted RBP9.37□□□□□ -0.91
MRPL40P1-201ENST00000542687 INTS4Q96HW7 963 aaKnown RBP9.37□□□□□ -0.91
MRPL40P1-201ENST00000542687 MAP3K14Q99558 947 aa9.37□□□□□ -0.91
MRPL40P1-201ENST00000542687 MYL10Q9BUA6 226 aa9.37□□□□□ -0.91
MRPL40P1-201ENST00000542687 RBM28Q9NW13 759 aaKnown RBP9.37□□□□□ -0.91
MRPL40P1-201ENST00000542687 FZD1Q9UP38 647 aa9.37□□□□□ -0.91
MRPL40P1-201ENST00000542687 HPS5Q9UPZ3 1129 aa9.37□□□□□ -0.91
MRPL40P1-201ENST00000542687 CSADQ9Y600 493 aa9.37□□□□□ -0.91
MRPL40P1-201ENST00000542687 UNCXA6NJT0 531 aa9.36□□□□□ -0.91
MRPL40P1-201ENST00000542687 RAD21O60216 631 aa9.36□□□□□ -0.91
MRPL40P1-201ENST00000542687 CDKL5O76039 1030 aa9.36□□□□□ -0.91
MRPL40P1-201ENST00000542687 CELF2O95319 508 aaKnown RBP9.36□□□□□ -0.91
MRPL40P1-201ENST00000542687 PTPRAP18433 802 aa9.36□□□□□ -0.91
MRPL40P1-201ENST00000542687 RXRAP19793 462 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms