RNA–Protein interactions for RNA: ENST00000542680.1

CACNA1C-IT3-201, CACNA1C intronic transcript 3, humanhuman

TSL 3 BASIC

Gene CACNA1C-IT3, Length 622 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-IT3-201ENST00000542680 ANKRD1Q15327 319 aa14.52□□□□□ -0.09
CACNA1C-IT3-201ENST00000542680 ADCK5Q3MIX3 580 aa14.52□□□□□ -0.09
CACNA1C-IT3-201ENST00000542680 PRAMEF18Q5VWM3 479 aa14.52□□□□□ -0.09
CACNA1C-IT3-201ENST00000542680 MFSD6Q6ZSS7 791 aa14.52□□□□□ -0.09
CACNA1C-IT3-201ENST00000542680 STOX1Q6ZVD7 989 aa14.52□□□□□ -0.09
CACNA1C-IT3-201ENST00000542680 FAM83AQ86UY5 434 aa14.52□□□□□ -0.09
CACNA1C-IT3-201ENST00000542680 TBC1D10CQ8IV04 446 aa14.52□□□□□ -0.09
CACNA1C-IT3-201ENST00000542680 NBPF3Q9H094 633 aa14.52□□□□□ -0.09
CACNA1C-IT3-201ENST00000542680 EHD4Q9H223 541 aa14.52□□□□□ -0.09
CACNA1C-IT3-201ENST00000542680 SCAF8Q9UPN6 1271 aaKnown RBP14.52□□□□□ -0.09
CACNA1C-IT3-201ENST00000542680 ALPK3Q96L96 1907 aa14.52□□□□□ -0.09
CACNA1C-IT3-201ENST00000542680 ZSWIM8A7E2V4 1837 aa14.52□□□□□ -0.09
CACNA1C-IT3-201ENST00000542680 MINDY4BA8MYZ0 360 aa14.51□□□□□ -0.09
CACNA1C-IT3-201ENST00000542680 POLR3DP05423 398 aaPredicted RBP14.51□□□□□ -0.09
CACNA1C-IT3-201ENST00000542680 MCM5P33992 734 aa14.51□□□□□ -0.09
CACNA1C-IT3-201ENST00000542680 NEK4P51957 841 aa14.51□□□□□ -0.09
CACNA1C-IT3-201ENST00000542680 DHX32Q7L7V1 743 aaKnown RBP14.51□□□□□ -0.09
CACNA1C-IT3-201ENST00000542680 MB21D2Q8IYB1 491 aaPredicted RBP14.51□□□□□ -0.09
CACNA1C-IT3-201ENST00000542680 TTC14Q96N46 770 aa14.51□□□□□ -0.09
CACNA1C-IT3-201ENST00000542680 TDRD3Q9H7E2 651 aaKnown RBP14.51□□□□□ -0.09
CACNA1C-IT3-201ENST00000542680 ZNF70Q9UC06 446 aaPredicted RBP14.51□□□□□ -0.09
CACNA1C-IT3-201ENST00000542680 MYH8P13535 1937 aa14.51□□□□□ -0.09
CACNA1C-IT3-201ENST00000542680 TNNI2P48788 182 aa14.5□□□□□ -0.09
CACNA1C-IT3-201ENST00000542680 PICALMQ13492 652 aa14.5□□□□□ -0.09
CACNA1C-IT3-201ENST00000542680 LDLRAD1Q5T700 205 aa14.5□□□□□ -0.09
CACNA1C-IT3-201ENST00000542680 HSCBQ8IWL3 235 aa14.5□□□□□ -0.09
CACNA1C-IT3-201ENST00000542680 SH3TC2Q8TF17 1288 aa14.5□□□□□ -0.09
CACNA1C-IT3-201ENST00000542680 FAM151AQ8WW52 585 aa14.5□□□□□ -0.09
CACNA1C-IT3-201ENST00000542680 ESR2Q92731 530 aa14.5□□□□□ -0.09
CACNA1C-IT3-201ENST00000542680 UPF3BQ9BZI7 483 aaKnown RBP14.5□□□□□ -0.09
CACNA1C-IT3-201ENST00000542680 DDX4Q9NQI0 724 aaKnown RBP14.5□□□□□ -0.09
CACNA1C-IT3-201ENST00000542680 FAM198AQ9UFP1 575 aa14.5□□□□□ -0.09
CACNA1C-IT3-201ENST00000542680 SWAP70Q9UH65 585 aa14.5□□□□□ -0.09
CACNA1C-IT3-201ENST00000542680 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.5□□□□□ -0.09
CACNA1C-IT3-201ENST00000542680 TAF6LQ9Y6J9 622 aa14.5□□□□□ -0.09
CACNA1C-IT3-201ENST00000542680 BDP1A6H8Y1 2624 aa14.49□□□□□ -0.09
CACNA1C-IT3-201ENST00000542680 PIEZO1Q92508 2521 aa14.49□□□□□ -0.09
CACNA1C-IT3-201ENST00000542680 NEDD4P46934 1319 aa14.49□□□□□ -0.09
CACNA1C-IT3-201ENST00000542680 CTDSPL2Q05D32 466 aa14.49□□□□□ -0.09
CACNA1C-IT3-201ENST00000542680 NFIAQ12857 509 aa14.49□□□□□ -0.09
CACNA1C-IT3-201ENST00000542680 C16orf86Q6ZW13 317 aa14.49□□□□□ -0.09
CACNA1C-IT3-201ENST00000542680 FAM122AQ96E09 287 aa14.49□□□□□ -0.09
CACNA1C-IT3-201ENST00000542680 AGXT2Q9BYV1 514 aa14.49□□□□□ -0.09
CACNA1C-IT3-201ENST00000542680 PDRG1Q9NUG6 133 aa14.49□□□□□ -0.09
CACNA1C-IT3-201ENST00000542680 PCDHAC2Q9Y5I4 1007 aa14.49□□□□□ -0.09
CACNA1C-IT3-201ENST00000542680 SIPA1L1O43166 1804 aa14.49□□□□□ -0.09
CACNA1C-IT3-201ENST00000542680 SSC5DA1L4H1 1573 aa14.48□□□□□ -0.09
CACNA1C-IT3-201ENST00000542680 RPTORQ8N122 1335 aa14.48□□□□□ -0.09
CACNA1C-IT3-201ENST00000542680 EXOSC10Q01780 885 aaKnown RBP14.48□□□□□ -0.09
CACNA1C-IT3-201ENST00000542680 GABPAQ06546 454 aa14.48□□□□□ -0.09
CACNA1C-IT3-201ENST00000542680 METTL16Q86W50 562 aaKnown RBP14.48□□□□□ -0.09
CACNA1C-IT3-201ENST00000542680 APOBEC3FQ8IUX4 373 aaKnown RBP14.48□□□□□ -0.09
CACNA1C-IT3-201ENST00000542680 TMEM87BQ96K49 555 aa14.48□□□□□ -0.09
CACNA1C-IT3-201ENST00000542680 PI4KBQ9UBF8 816 aa14.48□□□□□ -0.09
CACNA1C-IT3-201ENST00000542680 SERPINB13Q9UIV8 391 aa14.48□□□□□ -0.09
CACNA1C-IT3-201ENST00000542680 PPP2R3BQ9Y5P8 575 aa14.48□□□□□ -0.09
CACNA1C-IT3-201ENST00000542680 PLIN4Q96Q06 1357 aa14.47□□□□□ -0.09
CACNA1C-IT3-201ENST00000542680 K7ELQ4 463 aaPredicted RBP14.47□□□□□ -0.09
CACNA1C-IT3-201ENST00000542680 PLCD1P51178 756 aa14.47□□□□□ -0.09
CACNA1C-IT3-201ENST00000542680 CACNB1Q02641 598 aaPredicted RBP14.47□□□□□ -0.09
CACNA1C-IT3-201ENST00000542680 SART3Q15020 963 aaKnown RBP14.47□□□□□ -0.09
CACNA1C-IT3-201ENST00000542680 NBPF9Q3BBW0 867 aa14.47□□□□□ -0.09
CACNA1C-IT3-201ENST00000542680 LRIT3Q3SXY7 679 aa14.47□□□□□ -0.09
CACNA1C-IT3-201ENST00000542680 CCDC178Q5BJE1 867 aa14.47□□□□□ -0.09
CACNA1C-IT3-201ENST00000542680 FOXP4Q8IVH2 680 aaPredicted RBP14.47□□□□□ -0.09
CACNA1C-IT3-201ENST00000542680 SAP30BPQ9UHR5 308 aaKnown RBP14.47□□□□□ -0.09
CACNA1C-IT3-201ENST00000542680 HERC5Q9UII4 1024 aaKnown RBP14.47□□□□□ -0.09
CACNA1C-IT3-201ENST00000542680 CACNA1AO00555 2505 aa14.46□□□□□ -0.09
CACNA1C-IT3-201ENST00000542680 CYP2D7A0A087X1C5 515 aa14.46□□□□□ -0.09
CACNA1C-IT3-201ENST00000542680 CLRN2A0PK11 232 aa14.46□□□□□ -0.09
CACNA1C-IT3-201ENST00000542680 B4E1Z4 1266 aa14.46□□□□□ -0.09
CACNA1C-IT3-201ENST00000542680 ZBTB48P10074 688 aaPredicted RBP14.46□□□□□ -0.09
CACNA1C-IT3-201ENST00000542680 CYP2D6P10635 497 aa14.46□□□□□ -0.09
CACNA1C-IT3-201ENST00000542680 BMP8BP34820 402 aa14.46□□□□□ -0.09
CACNA1C-IT3-201ENST00000542680 NF2P35240 595 aa14.46□□□□□ -0.09
CACNA1C-IT3-201ENST00000542680 ARMC9Q7Z3E5 817 aa14.46□□□□□ -0.09
CACNA1C-IT3-201ENST00000542680 IQCA1Q86XH1 822 aa14.46□□□□□ -0.09
CACNA1C-IT3-201ENST00000542680 HOOK2Q96ED9 719 aa14.46□□□□□ -0.09
CACNA1C-IT3-201ENST00000542680 ZSCAN31Q96LW9 406 aaPredicted RBP14.46□□□□□ -0.09
CACNA1C-IT3-201ENST00000542680 IPO9Q96P70 1041 aaKnown RBP14.46□□□□□ -0.09
CACNA1C-IT3-201ENST00000542680 GDF15Q99988 308 aa14.46□□□□□ -0.09
CACNA1C-IT3-201ENST00000542680 TBC1D2Q9BYX2 928 aa14.46□□□□□ -0.09
CACNA1C-IT3-201ENST00000542680 VEZTQ9HBM0 779 aa14.46□□□□□ -0.09
CACNA1C-IT3-201ENST00000542680 NCOR1O75376 2440 aa14.45□□□□□ -0.1
CACNA1C-IT3-201ENST00000542680 PRC1O43663 620 aa14.45□□□□□ -0.1
CACNA1C-IT3-201ENST00000542680 TBC1D12O60347 775 aa14.45□□□□□ -0.1
CACNA1C-IT3-201ENST00000542680 KDM4AO75164 1064 aa14.45□□□□□ -0.1
CACNA1C-IT3-201ENST00000542680 LIFRP42702 1097 aa14.45□□□□□ -0.1
CACNA1C-IT3-201ENST00000542680 CDK8P49336 464 aa14.45□□□□□ -0.1
CACNA1C-IT3-201ENST00000542680 CACNB3P54284 484 aa14.45□□□□□ -0.1
CACNA1C-IT3-201ENST00000542680 AK2P54819 239 aa14.45□□□□□ -0.1
CACNA1C-IT3-201ENST00000542680 ARHGEF6Q15052 776 aa14.45□□□□□ -0.1
CACNA1C-IT3-201ENST00000542680 MTFR1Q15390 333 aa14.45□□□□□ -0.1
CACNA1C-IT3-201ENST00000542680 PPP4R3BQ5MIZ7 849 aa14.45□□□□□ -0.1
CACNA1C-IT3-201ENST00000542680 TMTC2Q8N394 836 aa14.45□□□□□ -0.1
CACNA1C-IT3-201ENST00000542680 CHMP4CQ96CF2 233 aa14.45□□□□□ -0.1
CACNA1C-IT3-201ENST00000542680 CCDC17Q96LX7 622 aa14.45□□□□□ -0.1
CACNA1C-IT3-201ENST00000542680 CDH23Q9H251 3354 aa14.45□□□□□ -0.1
CACNA1C-IT3-201ENST00000542680 MKNK2Q9HBH9 465 aa14.45□□□□□ -0.1
CACNA1C-IT3-201ENST00000542680 SH2B1Q9NRF2 756 aaPredicted RBP14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms