RNA–Protein interactions for RNA: ENST00000542555.1

CLPB-211, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 2

Gene CLPB, Length 421 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-211ENST00000542555 ASTN2O75129 1339 aaPredicted RBP10.33□□□□□ -0.76
CLPB-211ENST00000542555 KDM3BQ7LBC6 1761 aa10.32□□□□□ -0.76
CLPB-211ENST00000542555 MANSC4A6NHS7 340 aaPredicted RBP10.32□□□□□ -0.76
CLPB-211ENST00000542555 IRS4O14654 1257 aaPredicted RBP10.32□□□□□ -0.76
CLPB-211ENST00000542555 MMP14P50281 582 aa10.32□□□□□ -0.76
CLPB-211ENST00000542555 TBC1D9Q6ZT07 1266 aa10.32□□□□□ -0.76
CLPB-211ENST00000542555 CHSY3Q70JA7 882 aa10.32□□□□□ -0.76
CLPB-211ENST00000542555 CRISPLD1Q9H336 500 aa10.32□□□□□ -0.76
CLPB-211ENST00000542555 NDFIP2Q9NV92 336 aa10.32□□□□□ -0.76
CLPB-211ENST00000542555 PODXL2Q9NZ53 605 aa10.32□□□□□ -0.76
CLPB-211ENST00000542555 MYO3BQ8WXR4 1341 aa10.32□□□□□ -0.76
CLPB-211ENST00000542555 ATP2B4P23634 1241 aa10.31□□□□□ -0.76
CLPB-211ENST00000542555 PRKG1Q13976 671 aa10.31□□□□□ -0.76
CLPB-211ENST00000542555 CCDC152Q4G0S7 254 aa10.31□□□□□ -0.76
CLPB-211ENST00000542555 MOB2Q70IA6 237 aa10.31□□□□□ -0.76
CLPB-211ENST00000542555 NBPF11Q86T75 865 aa10.31□□□□□ -0.76
CLPB-211ENST00000542555 APOBEC3FQ8IUX4 373 aaKnown RBP10.31□□□□□ -0.76
CLPB-211ENST00000542555 GOPCQ9HD26 462 aa10.31□□□□□ -0.76
CLPB-211ENST00000542555 PCDHGC4Q9Y5F7 938 aa10.31□□□□□ -0.76
CLPB-211ENST00000542555 POLR2AP24928 1970 aaKnown RBP10.31□□□□□ -0.76
CLPB-211ENST00000542555 PPP1R12BO60237 982 aaPredicted RBP10.3□□□□□ -0.76
CLPB-211ENST00000542555 WDHD1O75717 1129 aaPredicted RBP10.3□□□□□ -0.76
CLPB-211ENST00000542555 ADH6P28332 368 aa10.3□□□□□ -0.76
CLPB-211ENST00000542555 GATA4P43694 442 aa10.3□□□□□ -0.76
CLPB-211ENST00000542555 RIPK4P57078 832 aa10.3□□□□□ -0.76
CLPB-211ENST00000542555 TLR1Q15399 786 aa10.3□□□□□ -0.76
CLPB-211ENST00000542555 PROSER3Q2NL68 480 aa10.3□□□□□ -0.76
CLPB-211ENST00000542555 PRAMEF18Q5VWM3 479 aa10.3□□□□□ -0.76
CLPB-211ENST00000542555 ANKRD18AQ8IVF6 992 aa10.3□□□□□ -0.76
CLPB-211ENST00000542555 ZNF428Q96B54 188 aa10.3□□□□□ -0.76
CLPB-211ENST00000542555 ANGEL1Q9UNK9 670 aaKnown RBP10.3□□□□□ -0.76
CLPB-211ENST00000542555 TNRC18O15417 2968 aaPredicted RBP10.3□□□□□ -0.76
CLPB-211ENST00000542555 DUOX1Q9NRD9 1551 aa10.3□□□□□ -0.76
CLPB-211ENST00000542555 XDHP47989 1333 aa10.3□□□□□ -0.76
CLPB-211ENST00000542555 LAMB2P55268 1798 aa10.29□□□□□ -0.76
CLPB-211ENST00000542555 PTPN12Q05209 780 aaKnown RBP10.29□□□□□ -0.76
CLPB-211ENST00000542555 SLC4A8Q2Y0W8 1093 aa10.29□□□□□ -0.76
CLPB-211ENST00000542555 OTOP1Q7RTM1 612 aa10.29□□□□□ -0.76
CLPB-211ENST00000542555 LRP10Q7Z4F1 713 aa10.29□□□□□ -0.76
CLPB-211ENST00000542555 ZCCHC2Q9C0B9 1178 aaKnown RBP10.29□□□□□ -0.76
CLPB-211ENST00000542555 EFCC1Q9HA90 598 aa10.29□□□□□ -0.76
CLPB-211ENST00000542555 HYPKQ9NX55 129 aa10.29□□□□□ -0.76
CLPB-211ENST00000542555 DBF4Q9UBU7 674 aaPredicted RBP10.29□□□□□ -0.76
CLPB-211ENST00000542555 LAS1LQ9Y4W2 734 aaKnown RBP10.29□□□□□ -0.76
CLPB-211ENST00000542555 LRRC37AA6NMS7 1700 aa10.29□□□□□ -0.76
CLPB-211ENST00000542555 ZNF609O15014 1411 aa10.28□□□□□ -0.76
CLPB-211ENST00000542555 SCO2A0A1W2PP80 73 aa10.28□□□□□ -0.76
CLPB-211ENST00000542555 ZBTB48P10074 688 aaPredicted RBP10.28□□□□□ -0.76
CLPB-211ENST00000542555 PLA2G4AP47712 749 aa10.28□□□□□ -0.76
CLPB-211ENST00000542555 FXR1P51114 621 aaKnown RBP eCLIP10.28□□□□□ -0.76
CLPB-211ENST00000542555 USP4Q13107 963 aa10.28□□□□□ -0.76
CLPB-211ENST00000542555 NBPF9Q3BBW0 867 aa10.28□□□□□ -0.76
CLPB-211ENST00000542555 HDGFL1Q5TGJ6 251 aa10.28□□□□□ -0.76
CLPB-211ENST00000542555 CDC5LQ99459 802 aaKnown RBP10.28□□□□□ -0.76
CLPB-211ENST00000542555 ISCA1Q9BUE6 129 aa10.28□□□□□ -0.76
CLPB-211ENST00000542555 CHPF2Q9P2E5 772 aa10.28□□□□□ -0.76
CLPB-211ENST00000542555 CEP126Q9P2H0 1117 aa10.28□□□□□ -0.76
CLPB-211ENST00000542555 PTPN22Q9Y2R2 807 aa10.28□□□□□ -0.76
CLPB-211ENST00000542555 WNT10BO00744 389 aa10.27□□□□□ -0.77
CLPB-211ENST00000542555 MYO1BO43795 1136 aa10.27□□□□□ -0.77
CLPB-211ENST00000542555 TRIM28Q13263 835 aaKnown RBP10.27□□□□□ -0.77
CLPB-211ENST00000542555 SUPT20HL1Q3ZLR7 823 aa10.27□□□□□ -0.77
CLPB-211ENST00000542555 ZBTB38Q8NAP3 1195 aaPredicted RBP10.27□□□□□ -0.77
CLPB-211ENST00000542555 CCDC85AQ96PX6 553 aaPredicted RBP10.27□□□□□ -0.77
CLPB-211ENST00000542555 PLEKHF1Q96S99 279 aa10.27□□□□□ -0.77
CLPB-211ENST00000542555 GMLQ99445 158 aa10.27□□□□□ -0.77
CLPB-211ENST00000542555 KRTAP9-2Q9BYQ4 174 aa10.27□□□□□ -0.77
CLPB-211ENST00000542555 SCAF8Q9UPN6 1271 aaKnown RBP10.27□□□□□ -0.77
CLPB-211ENST00000542555 NDUFB9Q9Y6M9 179 aa10.27□□□□□ -0.77
CLPB-211ENST00000542555 UNCXA6NJT0 531 aa10.26□□□□□ -0.77
CLPB-211ENST00000542555 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.26□□□□□ -0.77
CLPB-211ENST00000542555 ATXN7O15265 892 aaPredicted RBP10.26□□□□□ -0.77
CLPB-211ENST00000542555 PDE8AO60658 829 aa10.26□□□□□ -0.77
CLPB-211ENST00000542555 EN2P19622 333 aaPredicted RBP10.26□□□□□ -0.77
CLPB-211ENST00000542555 SP3Q02447 781 aa10.26□□□□□ -0.77
CLPB-211ENST00000542555 SLC9C1Q4G0N8 1177 aa10.26□□□□□ -0.77
CLPB-211ENST00000542555 STRIP1Q5VSL9 837 aa10.26□□□□□ -0.77
CLPB-211ENST00000542555 NLRP8Q86W28 1048 aa10.26□□□□□ -0.77
CLPB-211ENST00000542555 C1orf216Q8TAB5 229 aa10.26□□□□□ -0.77
CLPB-211ENST00000542555 CD99L2Q8TCZ2 262 aa10.26□□□□□ -0.77
CLPB-211ENST00000542555 CHMP4AQ9BY43 222 aa10.26□□□□□ -0.77
CLPB-211ENST00000542555 COA1Q9GZY4 146 aa10.26□□□□□ -0.77
CLPB-211ENST00000542555 SEC31BQ9NQW1 1179 aa10.26□□□□□ -0.77
CLPB-211ENST00000542555 APBB1O00213 710 aa10.25□□□□□ -0.77
CLPB-211ENST00000542555 SASH1O94885 1247 aa10.25□□□□□ -0.77
CLPB-211ENST00000542555 HOXB7P09629 217 aa10.25□□□□□ -0.77
CLPB-211ENST00000542555 SPATA31C1P0DKV0 1188 aa10.25□□□□□ -0.77
CLPB-211ENST00000542555 ITGB7P26010 798 aa10.25□□□□□ -0.77
CLPB-211ENST00000542555 IREB2P48200 963 aaKnown RBP10.25□□□□□ -0.77
CLPB-211ENST00000542555 KIF22Q14807 665 aa10.25□□□□□ -0.77
CLPB-211ENST00000542555 DLGAP5Q15398 846 aa10.25□□□□□ -0.77
CLPB-211ENST00000542555 ARSJQ5FYB0 599 aaPredicted RBP10.25□□□□□ -0.77
CLPB-211ENST00000542555 LDLRAD1Q5T700 205 aa10.25□□□□□ -0.77
CLPB-211ENST00000542555 ARMC5Q96C12 935 aa10.25□□□□□ -0.77
CLPB-211ENST00000542555 PLVAPQ9BX97 442 aa10.25□□□□□ -0.77
CLPB-211ENST00000542555 R3HDMLQ9H3Y0 253 aa10.25□□□□□ -0.77
CLPB-211ENST00000542555 PPP2R3BQ9Y5P8 575 aa10.25□□□□□ -0.77
CLPB-211ENST00000542555 TAF1P21675 1872 aa10.25□□□□□ -0.77
CLPB-211ENST00000542555 DLG5Q8TDM6 1919 aa10.25□□□□□ -0.77
CLPB-211ENST00000542555 DCDC2BA2VCK2 349 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms